ID: uc002slo.2_intron_6_0_chr2_74708010_r
GENE: (4)
chr2:74707960-74708132-


(2)
AGO2.ip 		(2)
B-CELL 		(1)
BREAST 		(7)
CELL-LINE 		(1)
HELA 		(1)
OTHER 		(5)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
CAGCATGGGACCCAGCTTCCTTCCTGCTCCTGATCCAAAAGGACTTACCTGTGAGTGGCTGGGGAGTAGGGAGGGGAGCAGCCTGAGCTAGGCTGAGCCCTCACTCCCTGTTTCCACCCAAAGCCTCTGTTGCATGAGGCAGAAGCTTTGTATAGCCTGGCCTCAGAGGAAAG
.......................................................(((.((((((.((((((((((..(((((((...)))))))..)))...))))))))))))).))).....................................................
..................................................51......................................................................123................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189784RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189785SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029131(GSM416760)
MCF7. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
..................................................GTGAGTGGCTGGGGAGTAG........................................................................................................191287.00287.00263.0018.00-5.00-------1.00----------
..................................................GTGAGTGGCTGGGGAGTA.........................................................................................................18112.0012.0012.00---------------------
..................................................GTGAGTGGCTGGGGAGTAA........................................................................................................1916.0012.006.00---------------------
..................................................GTGAGTGGCTGGGGAGTAGGGAGG...................................................................................................2414.004.00--4.00-------------------
..................................................GTGAGTGGCTGGGGAGTTG........................................................................................................1914.002.004.00---------------------
..................................................GTGAGTGGCTGGGGAGTAGGGAG....................................................................................................2312.002.00--2.00-------------------
..................................................GTGAGTGGCTGGGGAGTAGGGAGGGGAG...............................................................................................2812.002.00-2.00--------------------
..................................................GTGAGTGGCTGGGGAGTAT........................................................................................................1912.0012.001.00---1.00-----------------
..................................................GTGAGTGGCTGGGGAGTGG........................................................................................................1912.002.002.00---------------------
..................................................GTGAGTGGCTGGGGAGTCG........................................................................................................1912.002.001.001.00--------------------
..................................................GTGAGTGGCTGGGGAGAAA........................................................................................................192.000.002.00---------------------
..................................................GTGAGTGGCTGGGGAGT..........................................................................................................1712.002.00----1.00-------------1.00---
....................................................................................................TCACTCCCTGTTTCCACCCAAAG..................................................2312.002.00---2.00------------------
..................................................GTGAGTGGCTGGGGAGTAGGGAGGGGAGCAG............................................................................................3111.001.00-----------------1.00----
...................................................TGAGTGGCTGGGGAGTAG........................................................................................................1811.001.00-1.00--------------------
..................................................GTGAGTGGCTGGGGAGTAGGG......................................................................................................2111.001.00--1.00-------------------
..................................................GTGAGTGGCTGGGGAGTAAAA......................................................................................................2111.0012.00--------1.00-------------
...................................................TGAGTGGCTGGGGAGTAGA.......................................................................................................1911.001.00---------------------1.00
...................................................TGAGTGGCTGGGGAGTAGGGAGGGGAGCAGC...........................................................................................3111.001.00-------------------1.00--
...................................................................................................CTCACTCCCTGTTTCCACCCAA....................................................2211.001.00----------1.00-----------
.................................................................................................CCCTCACTCCCTGTTTCCACCCAAAG..................................................2611.001.00-1.00--------------------
..................................................GTGAGTGGCTGGGGAGTAGCC......................................................................................................2111.00287.001.00---------------------
....................................................GAGTGGCTGGGGAGTAGA.......................................................................................................1821.001.00------------1.00---------
..................................................GTGAGTGGCTGGGGACTAG........................................................................................................191.000.001.00---------------------
.......................................................................................CTAGGCTGAGCCCTCACTCCCT................................................................2211.001.001.00---------------------
..................................................................TAGGGAGGGGAGCAGCC..........................................................................................1711.001.00--1.00-------------------
..................................................................................................................................................TTTGTATAGCCTGGCCTCAGAGG....2311.001.00----1.00-----------------
......................................................................................................................................TGAGGCAGAAGCTTTATAG....................191.000.00-1.00--------------------
..................................................GTGAGTGGCTGGGGAGTAGG.......................................................................................................2011.001.001.00---------------------
...................................................TGAGTGGCTGGGGAGTAGGGAGGGGAGCAG............................................................................................3011.001.00--1.00-------------------
.................................................................................................CCCTCACTCCCTGTTTCCACCCAAA...................................................2511.001.00-1.00--------------------
...............................................................GAGTAGGGAGGGGAGCAGC...........................................................................................1911.001.00---------1.00------------
....................................................................................................TCACTCCCTGTTTCCACCCAAAT..................................................231.000.00---1.00------------------
..................................................GTGAGTGGCTGGGGAGTT.........................................................................................................1811.002.001.00---------------------
...........................................................TGGGGAGTAGGGAGGGGAGCAGT...........................................................................................231.000.00-------1.00--------------
..................................................GTGAGTGGCTGGGGAGAAC........................................................................................................191.000.001.00---------------------
.....................TCCTGCTCCTGATCCAAAAGGAC.................................................................................................................................2311.001.00--------------1.00-------
..................................................GTGAGTGGCTGGGGAGTAGGGAGGGGAGCAGC...........................................................................................3211.001.00-----1.00----------------
...................................................TGAGTGGCTGGGGAGTATATA.....................................................................................................211.000.00----1.00-----------------
.....................TCCTGCTCCTGATCCAAAAGGACTTACCTCC.........................................................................................................................311.000.00----------------1.00-----
..................................................GTGAGTGGCTGGGGAGTAGGGAGGGGAGC..............................................................................................2911.001.00-----1.00----------------
..................................................GTGAGTGGCTGGGGAGAAAG.......................................................................................................201.000.001.00---------------------
....................................................GAGTGGCTGGGGAGTAG........................................................................................................1721.001.001.00---------------------
........................................................................................................................AAGCCTCTGTTGCATGAGGCAGAAGCT..........................2711.001.00--------------------1.00-
...................................................................AGGGAGGGGAGCAGCCTAGGG.....................................................................................211.000.00------1.00---------------

Antisense strand
CAGCATGGGACCCAGCTTCCTTCCTGCTCCTGATCCAAAAGGACTTACCTGTGAGTGGCTGGGGAGTAGGGAGGGGAGCAGCCTGAGCTAGGCTGAGCCCTCACTCCCTGTTTCCACCCAAAGCCTCTGTTGCATGAGGCAGAAGCTTTGTATAGCCTGGCCTCAGAGGAAAG
.......................................................(((.((((((.((((((((((..(((((((...)))))))..)))...))))))))))))).))).....................................................
..................................................51......................................................................123................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189784RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189785SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029131(GSM416760)
MCF7. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
.................................................................GTAGGGAGGGGAGCAGCCTGAGCCCC.................................................................................. 261.000.00------1.00---------------
....................................................................................................................CCCAAAGCCTCTGTTACAC...................................... 191.000.00-------------1.00--------
.........ACCCAGCTTCCTTCCTTA.................................................................................................................................................. 181.000.00---------------1.00------
...........................................................................................AGGGAGTGAGGGCTCAGC................................................................ 1820.500.50-----0.50----------------