ID: uc002sjz.2_intron_0_0_chr2_74154180_f.3p
GENE: (1)
chr2:74173646-74173895+


(1)
AGO2.ip 		(3)
B-CELL 		(3)
BRAIN 		(13)
BREAST 		(10)
CELL-LINE 		(1)
CERVIX 		(3)
HEART 		(1)
OTHER 		(1)
SKIN 		(1)
XRN.ip

Sense strand
AAAATCTCATACCTGATTATGAAATTTTGACTAAGCTGGGGATCTGATTCTACCTTTTTGGTGGAAGGAAACTTTTGTAATTTCTTCTTTCATTGATTATTAAACCTGTTTGGGGAGGTAGGGGTGTGTGTGGAGGGGTGTACCCCATGGAGTAAATATGCTTTCTAGGAAATTTTCTTCTTTTTTTCATCTCCCTCTAGGCCTGCACTGCCCAAAGTCTTGGAAACTTGCTGGATATGATGTACCGGGA
...............................................................................................................((((((((..(((..........((((....))))..((((.((((...((.....))..)))).))))...)))..))))))))......................................................
............................................................................................................109........................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		TAX577742(Rovira)
total RNA. (breast)		TAX577746(Rovira)
total RNA. (breast)		TAX577580(Rovira)
total RNA. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577588(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		TAX577745(Rovira)
total RNA. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189784GSM359197(GSM359197)
hepg2_depl_cip_tap. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM532874(GSM532874)
G699T. (cervix)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM359196(GSM359196)
m3m7G_ip. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189785TAX577579(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR189782
.................................................................................................................GGAGGTAGGGGTGTGTGTAGTT...................................................................................................................22427.000.259.005.002.752.75-1.002.250.752.25----0.50-----------------0.25---0.250.25--
.................................................................................................................GGAGGTAGGGGTGTGTGTGGCT...................................................................................................................225.000.001.00--1.00-1.00-1.00-----1.00-------------------------
.................................................................................................................GGAGGTAGGGGTGTGTGTAGCT...................................................................................................................2244.000.251.251.500.500.25-0.250.25--------------------------------
.................................................................................................................GGAGGTAGGGGTGTGTGTGGTT...................................................................................................................223.000.001.001.001.00------------------------------------
.................................................................................................................GGAGGTAGGGGTGTGTGTAGT....................................................................................................................2142.500.251.250.250.250.25-0.25--0.25------------------------------
.............................................................................................................................................................................TTTCTTCTTTTTTTCATTTC.........................................................202.000.00----2.00----------------------------------
............................................................................................................................................................................................................GCACTGCCCAAAGTCTTGGAAACTTG....................2612.002.00----------------1.00------------1.00---------
.................................................................................................................GGAGGTAGGGGTGTGTGTAGTA...................................................................................................................2241.500.25-0.250.250.75---------------------------0.25-------
.................................................................................................................GGAGGTAGGGGTGTGTGTGGGT...................................................................................................................221.000.00-------------------1.00-------------------
...........................................................................................................................................................................................................................TTGGAAACTTGCTGGATATGATGTACC....2711.001.00--------------------1.00------------------
..............................................................................................................................................................................TTCTTCTTTTTTTCATTTC.........................................................191.000.00----1.00----------------------------------
...................................................................................................................AGGTAGGGGTGTGTGTGCTTT..................................................................................................................211.000.00------------------1.00--------------------
................................................................................................................................................................................CTTCTTTTTTTCATCTCTTAG.....................................................211.000.00------------1.00--------------------------
...........................................................................................................................................................................ATTTTCTTCTTTTTTTCCTCC..........................................................211.000.00---------1.00-----------------------------
...............................................................................................................................................................................................................................AAACTTGCTGGATATGATGTA......2111.001.00-------------------------1.00-------------
.................................................................................................................GGAGGTAGGGGTGTGGTA.......................................................................................................................181.000.00---------------------------1.00-----------
..........................................................................................................................................................................AATTTTCTTCTTTTTTCTTG............................................................201.000.00----1.00----------------------------------
..........................................................................................................................................................................................................................CTTGGAAACTTGCTGGATATGATGTACC....2811.001.00--------------1.00------------------------
.....................................................................................................................................................................................................................AAAGTCTTGGAAACTTGCTGGAT..............2311.001.00-----------1.00---------------------------
...................................................................................................................................................................................................................................TTGCTGGATATGATGTACT....191.000.00-----------------1.00---------------------
.............................................................................................................................................................................................................................GGAAACTTGCTGGATATGATGTACC....2511.001.00--------------------------1.00------------
.............................................................................................................................................................................TTTCTTCTTTTTTTCAAAGT.........................................................201.000.00------------------------------1.00--------
.................................................................................................................GGAGGTAGGGGTGTGTGTGGTTA..................................................................................................................231.000.00-------1.00-------------------------------
................................................................................................................................................................................................................................AACTTGCTGGATATGATGTA......2011.001.00----------1.00----------------------------
.................................................................................................................GGAGGTAGGGGTGTGTGTGGT....................................................................................................................211.000.001.00--------------------------------------
.................................................................................................................................................................................................................................ACTTGCTGGATATGATGTA......1911.001.00----------1.00----------------------------
.............................................................................................................................................................................................................................GGAAACTTGCTGGATATGATGTACCGGG.2811.001.00---------------------1.00-----------------
................................................................................................................................................................................CTTCTTTTTTTCATCTCCAC......................................................201.000.00------------1.00--------------------------
..............................................................................................................................................................................TTCTTCTTTTTTTCATTTGA........................................................201.000.00----1.00----------------------------------
.............................................................................................................................................................................TTTCTTCTTTTTTTCATTAC.........................................................201.000.00----------------------------1.00----------
.................................................................................................................GGAGGTAGGGGTGTGTGTGGTTT..................................................................................................................231.000.00--1.00------------------------------------
............................................................................................................................................................................................................................TGGAAACTTGCTGGATATG...........1911.001.00-----------1.00---------------------------
......................................................................................................................................................................................................................................CTGGATATGATGTACCGGG.1911.001.00------------------------1.00--------------
...................................................................................................................................................................................................................................TTGCTGGATATGATGTACCGGAGCC251.000.00----------------------1.00----------------
.................................................................................................................GGAGGTAGGGGTGTGTGTAG.....................................................................................................................2040.750.25-0.50----0.25--------------------------------
.................................................................................................................GGAGGTAGGGGTGTGTGTATTT...................................................................................................................2240.500.250.25-0.25------------------------------------
.................................................................................................................GGAGGTAGGGGTGTGTGTAGC....................................................................................................................2140.500.25-0.25---0.25---------------------------------
..............................................................................AATTTCTTCTTTCATTG...........................................................................................................................................................1740.250.25----------------------------------0.25----
.................................................................................................................GGAGGTAGGGGTGTGTGTCGTT...................................................................................................................2240.250.25-0.25-------------------------------------
.................................................................................................................GGAGGTAGGGGTGTGTGTCGCT...................................................................................................................2240.250.25---0.25-----------------------------------
.................................................................................................................GGAGGTAGGGGTGTGTGTAGCA...................................................................................................................2240.250.25-------------------------------------0.25-
.................................................................................................................GGAGGTAGGGGTGTGTGTG......................................................................................................................1940.250.25---------------------------------0.25-----
.................................................................................................................GGAGGTAGGGGTGTGTGT.......................................................................................................................1840.250.25-0.25-------------------------------------
.................................................................................................................GGAGGTAGGGGTGTGTGGAT.....................................................................................................................2060.170.17--------------------------------------0.17
.................................................................................................................GGAGGTAGGGGTGTGTG........................................................................................................................1760.170.17-------------------------------0.17-------
.................................................................................................................GGAGGTAGGGGTGTGTGCTGT....................................................................................................................2160.170.17-----0.17---------------------------------
.................................................................................................................GGAGGTAGGGGTGTGTGCT......................................................................................................................1960.170.17---0.17-----------------------------------

Antisense strand
AAAATCTCATACCTGATTATGAAATTTTGACTAAGCTGGGGATCTGATTCTACCTTTTTGGTGGAAGGAAACTTTTGTAATTTCTTCTTTCATTGATTATTAAACCTGTTTGGGGAGGTAGGGGTGTGTGTGGAGGGGTGTACCCCATGGAGTAAATATGCTTTCTAGGAAATTTTCTTCTTTTTTTCATCTCCCTCTAGGCCTGCACTGCCCAAAGTCTTGGAAACTTGCTGGATATGATGTACCGGGA
...............................................................................................................((((((((..(((..........((((....))))..((((.((((...((.....))..)))).))))...)))..))))))))......................................................
............................................................................................................109........................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		TAX577742(Rovira)
total RNA. (breast)		TAX577746(Rovira)
total RNA. (breast)		TAX577580(Rovira)
total RNA. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577588(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		TAX577745(Rovira)
total RNA. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189784GSM359197(GSM359197)
hepg2_depl_cip_tap. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM532874(GSM532874)
G699T. (cervix)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM359196(GSM359196)
m3m7G_ip. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189785TAX577579(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR189782
...................................................................................................................................................................................................TCTAGGCCTGCACTGCCCAAAACC............................... 241.000.00---------1.00-----------------------------
..................................................................................................................GAGGTAGGGGTGTGTTTAA..................................................................................................................... 191.000.00---------------1.00-----------------------
....................................................................................................................................................................................TTTTTTTCATCTCCCAAAT................................................... 191.000.00-----------------------1.00---------------
........................................................GTTTCCTTCCACCAAA.................................................................................................................................................................................. 1630.330.33--------------------------------0.33------