ID: uc002siz.2_intron_6_0_chr2_73475055_f.3p
GENE: (7)
chr2:73475919-73476168+


(1)
AGO2.ip 		(3)
B-CELL 		(1)
BRAIN 		(2)
BREAST 		(12)
CELL-LINE 		(1)
HEART 		(2)
HELA 		(3)
LIVER 		(1)
OTHER 		(6)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
GGGGAGTTTCAGGTGATTCCTAAGTCATCTCATGGGGTCCTTATTTGCTTGGACTGAGGAGTAGCTATTCTGTTTATCTCTGTTAATTCCCAGATGAATCAGCATGTTTTATTTGGTGGGGGCAGATGGGTATATTTTACCCTACCGTATATGTCAACCTTCACCCCAAAGCATTCTCATCCTTTTCTGGGTCTCTCCAGGATTATCAGGCAATTGTTGATGCTGAGTGGAACATTCTCTATGACAAGTT
.....................................................................................................................((((......(((((.....)))))....((........)).....))))...................................................................................
.....................................................................................................................118...................................................................188............................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189784SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		GSM416733(GSM416733)
HEK293. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		GSM359197(GSM359197)
hepg2_depl_cip_tap. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		GSM359196(GSM359196)
m3m7G_ip. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR343334SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
.....................................................................................................................................................................CCAAAGCATTCTCATTTTG..................................................................1923.000.0022.00--1.00-------------------------------
.....................................................................................................................................................................CCAAAGCATTCTCATATTG..................................................................1918.000.0018.00----------------------------------
.....................................................................................................................................................................CCAAAGCATTCTCATTCTG..................................................................199.000.009.00----------------------------------
...................................................................................................................................................................................TCCTTTTCTGGGTCTCTC.....................................................1814.004.00-----2.002.00----------------------------
...................................................................................................................................................................................................................AATTGTTGATGCTGAGTGGAAC.................2222.502.50--1.00---------------1.00-------0.50--------
........................................................................................................................................................................................................GATTATCAGGCAATTGTTG...............................1912.002.00--------2.00--------------------------
.........................................................................................................................................................................................................................TGATGCTGAGTGGAACATT..............1922.002.00----0.50---------0.50-----0.50-------0.50------
.............................................................................................................................................................................................................TCAGGCAATTGTTGATGCTGAGTGGAACATTCT............3312.002.00-----------1.00-------1.00---------------
...................................................................................................................................................................................................................AATTGTTGATGCTGAGTGAAA..................212.000.00-2.00---------------------------------
.....................................................................................................................................................................CCAAAGCATTCTCATTTGG..................................................................192.000.002.00----------------------------------
...........................................................................................................................................................................................................................ATGCTGAGTGGAACATTCT............1921.501.50----1.00------------------------0.50-----
..........................................................................................................................CAGATGGGTATATTTTACAGGT..........................................................................................................221.000.00------------1.00----------------------
.....................................................................................................................................................................................................................TTGTTGATGCTGAGTGGA...................1821.001.00----------------------0.50-0.50----------
......................................................................................................................................................................CAAAGCATTCTCATCTTG..................................................................181.000.001.00----------------------------------
..........................................................................................................................................................................................................TTATCAGGCAATTGTTGATGCTGAGTGGAACATTCTCTATGAC.....4311.001.00---------------1.00-------------------
......................................................................................................................................................................................................AGGATTATCAGGCAATTGTTG...............................2111.001.00-1.00---------------------------------
.............................................................................................................................................................................................................TCAGGCAATTGTTGATGCTGAGTGGAACA................2911.001.00---------1.00-------------------------
...............................................................................................................................................................................................................AGGCAATTGTTGATGCTGA........................1921.001.00----------0.50---0.50--------------------
........................................................................................................................................................................................................GATTATCAGGCAATTGTTGAT.............................2111.001.00----------------1.00------------------
.......................................................................................................................................................................................................GGATTATCAGGCAATTGTTGATGCTGAGTGG....................3111.001.00--1.00--------------------------------
...................................................................................................................................................................................................................AATTGTTGATGCTGAGTGGAA..................2121.001.00-------------1.00---------------------
............................................................................................GATGAATCAGCATGTTTTATTTGGTGGGG.................................................................................................................................2911.001.00-----------------1.00-----------------
...........................................................................................................................................................................................................................ATGCTGAGTGGAACATTC.............1821.001.00----------1.00------------------------
...................................................................................................................................................................................................................AATTGTTGATGCTGAGTGGA...................2021.001.00---------0.50---------------------0.50---
.....................................................................................................................................................................CCAAAGCATTCTCATTGTC..................................................................191.000.001.00----------------------------------
..................................................................................................................................................................................................................CAATTGTTGATGCTGAGTGGA...................2121.001.00-------1.00---------------------------
.....................................................................................................................................................................CCAAAGCATTCTCATTCGG..................................................................191.000.001.00----------------------------------
.......................................................................................................................................................................................................................GTTGATGCTGAGTGGAAC.................1820.500.50---------------------0.50-------------
....................................................................................................................................................................................................................ATTGTTGATGCTGAGTGGAACATTCTCTATGA......3220.500.50-------------------------0.50---------
...................................................................................................................................................................................................................AATTGTTGATGCTGAGTGG....................1920.500.50-----------------------0.50-----------
....................................................................................................................................................................................................................ATTGTTGATGCTGAGTGGA...................1920.500.50------------------------------0.50----
..............................................................................................................................................................................................................................CTGAGTGGAACATTCTCT..........1820.500.50----0.50------------------------------
...............................................................................................................................................................................................................AGGCAATTGTTGATGCTGAGT......................2120.500.50-------0.50---------------------------
.....................................................................................................................................................................................................................TTGTTGATGCTGAGTGGAACATTCTCTATGAC.....3220.500.50-------0.50---------------------------
....................................................................................................................................................................................................................ATTGTTGATGCTGAGTGG....................1820.500.50--------------------------------0.50--
......................................................................................................................................................................................................................TGTTGATGCTGAGTGGAACATTCTCTATGA......3020.500.50---------------------------0.50-------
......................................................................................................................................................................................................................................AACATTCTCTATGACAAG..1830.330.33---------------------------------0.33-
..............................................................................................................ATTTGGTGGGGGCAGA............................................................................................................................1660.170.17----------------------------------0.17

Antisense strand
GGGGAGTTTCAGGTGATTCCTAAGTCATCTCATGGGGTCCTTATTTGCTTGGACTGAGGAGTAGCTATTCTGTTTATCTCTGTTAATTCCCAGATGAATCAGCATGTTTTATTTGGTGGGGGCAGATGGGTATATTTTACCCTACCGTATATGTCAACCTTCACCCCAAAGCATTCTCATCCTTTTCTGGGTCTCTCCAGGATTATCAGGCAATTGTTGATGCTGAGTGGAACATTCTCTATGACAAGTT
.....................................................................................................................((((......(((((.....)))))....((........)).....))))...................................................................................
.....................................................................................................................118...................................................................188............................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189784SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		GSM416733(GSM416733)
HEK293. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		GSM359197(GSM359197)
hepg2_depl_cip_tap. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		GSM359196(GSM359196)
m3m7G_ip. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR343334SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
...........................................................................................AGATGAATCAGCATGCCG............................................................................................................................................. 181.000.00---1.00-------------------------------