ID: uc002sgj.3_intron_5_0_chr2_70444127_r.5p
GENE: (7)
chr2:70451486-70451735-


(17)
B-CELL
(5)
BRAIN
(9)
CELL-LINE
(1)
CERVIX
(2)
HEART
(2)
HELA
(2)
LIVER
(2)
OTHER
(12)
SKIN
(1)
UTERUS

Sense strand
CAACAGGAAAGTCTAAGGGATATGGCTTTGTCTCCTTTTTCAACAAATGGGTGAGCTCAGTGAGAAGTGCATGGATAATGCTTAAAGAGTAAAGAATGGAAACACTCCGTTTTAATTACTAATCTTTTTTTCGTCTGCTGTTTATTTTACTGATGATTAAAATAAACCCTCACTAGAAGATTTCTTCTGTTTTGTCTGTTTAACATTTATTGGCACCTGAGGCATGCAGAGTACTGATAAGATGTTTTCA
...............................................((((....))))..((((((.((((.....))))......(((((((((((((.....))))))))..)))))......))))))......................................................................................................................
............................................45.......................................................................................134..................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR189787SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR189782SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR029124(GSM416753)
HeLa. (hela)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR040008(GSM532893)
G727N. (cervix)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
.................................................GGTGAGCTCAGTGAGGACG......................................................................................................................................................................................1942.000.00-9.004.00-3.00-2.002.00-2.00--1.002.00-----1.00-1.001.00-1.00---1.00-1.00-1.00--1.00---1.00-1.00-1.001.001.00-1.001.00-1.00-1.00---
.............................................................................................................TTTTAATTACTAATCTTTTTT........................................................................................................................2116.006.006.00-------------------------------------------------------
.................................................................................TTAAAGAGTAAAGAATGGAAAC...................................................................................................................................................2213.003.00---3.00----------------------------------------------------
....................................................................................................................................................................................................................................GAGTACTGATAAGATGTTTT..2012.002.00----------2.00---------------------------------------------
........................................................................................................CTCCGTTTTAATTACTAATCTTT...........................................................................................................................2312.002.00------------------------------------1.001.00------------------
..........................................................................................AAAGAATGGAAACACTCCGTTTTAATTACTA.................................................................................................................................3112.002.00-----2.00--------------------------------------------------
...........................................................................................................CGTTTTAATTACTAATCTTT...........................................................................................................................2012.002.00-----------------------1.00-------------------------1.00------
.................................................................................TTAAAGAGTAAAGAATGGA......................................................................................................................................................1912.002.00--------------2.00-----------------------------------------
............................................AAATGGGTGAGCTCAGTGAGA.........................................................................................................................................................................................2111.001.00---------------------------------------------------1.00----
.............................................................................................................TTTTAATTACTAATCTTTTCT........................................................................................................................211.000.001.00-------------------------------------------------------
.................................................GGTGAGCTCAGTGAGGCC.......................................................................................................................................................................................181.000.00---------------------------------1.00----------------------
......................................................................................GAGTAAAGAATGGAAACACTCCGTTTTAATTACTAATCTTTTTTTCGTCTGCT...............................................................................................................5311.001.00-----------------------------------------------------1.00--
..................................................................................................................................TCGTCTGCTGTTTATTGG......................................................................................................181.000.00--------1.00-----------------------------------------------
............CTAAGGGATATGGCTCTG............................................................................................................................................................................................................................181.000.00--------------------------------------1.00-----------------
............CTAAGGGATATGGCTTTG............................................................................................................................................................................................................................1811.001.00------------1.00-------------------------------------------
.............................................................................................................TTTTAATTACTAATCTTCTTT........................................................................................................................211.000.001.00-------------------------------------------------------
........................................................................................................................AATCTTTTTTTCGTCTGCTGTTTACT........................................................................................................261.000.00-----------1.00--------------------------------------------
.............................................................................................................TTTTAATTACTAATCTTTCTT........................................................................................................................211.000.001.00-------------------------------------------------------
.................................................................................................................................................................................................................................GCAGAGTACTGATAACTGA......191.000.00--------1.00-----------------------------------------------
..........GTCTAAGGGATATGGCTTTGTCTC........................................................................................................................................................................................................................2411.001.00----------------------------------------------1.00---------
.................................CCTTTTTCAACAAATGG........................................................................................................................................................................................................1701.001.00-----------------------------1.00--------------------------
...CAGGAAAGTCTAAGGGATT....................................................................................................................................................................................................................................191.000.00---------------------------1.00----------------------------
............................................................................................................................TTTTTTTCGTCTGCTGTTTATTTTACTG..................................................................................................2811.001.00-----------1.00--------------------------------------------
..................................................GTGAGCTCAGTGAGAACGG.....................................................................................................................................................................................191.000.00--------------------------1.00-----------------------------
.................................................GGTGAGCTCAGTGAGGACA......................................................................................................................................................................................191.000.00-------------------------1.00------------------------------
..........................................................................................................CCGTTTTAATTACTAATCTTT...........................................................................................................................2111.001.00----------------1.00---------------------------------------
......................................................................ATGGATAATGCTTAAAGAG.................................................................................................................................................................1911.001.00----------------------------------1.00---------------------
............................................AAATGGGTGAGCTCAGTGAGAAGTGCAT..................................................................................................................................................................................2811.001.00------------------------------------------1.00-------------
..............................................................................................................................TTTTTCGTCTGCTGTTTATTTTACTG..................................................................................................2611.001.00---------------1.00----------------------------------------
.............................................................................................................TTTTAATTACTAATCTTATTA........................................................................................................................211.000.001.00-------------------------------------------------------
....................................................................................................AACACTCCGTTTTAATTACTAATCTTT...........................................................................................................................2711.001.00-----------------1.00--------------------------------------
...............................CTCCTTTTTCAACAAATGG........................................................................................................................................................................................................1911.001.00------------------1.00-------------------------------------
..........................................ACAAATGGGTGAGCTCA...............................................................................................................................................................................................1720.500.50-----0.50--------------------------------------------------
...............................................................................................................TTAATTACTAATCTTT...........................................................................................................................1670.290.29------------------------------------------------------0.140.14
..............................................................................................................TTTAATTACTAATCTTT...........................................................................................................................1740.250.25---------------0.25----------------------------------------

Antisense strand
CAACAGGAAAGTCTAAGGGATATGGCTTTGTCTCCTTTTTCAACAAATGGGTGAGCTCAGTGAGAAGTGCATGGATAATGCTTAAAGAGTAAAGAATGGAAACACTCCGTTTTAATTACTAATCTTTTTTTCGTCTGCTGTTTATTTTACTGATGATTAAAATAAACCCTCACTAGAAGATTTCTTCTGTTTTGTCTGTTTAACATTTATTGGCACCTGAGGCATGCAGAGTACTGATAAGATGTTTTCA
...............................................((((....))))..((((((.((((.....))))......(((((((((((((.....))))))))..)))))......))))))......................................................................................................................
............................................45.......................................................................................134..................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR189787SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR189782SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR029124(GSM416753)
HeLa. (hela)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR040008(GSM532893)
G727N. (cervix)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
........AAGTCTAAGGGATATAC................................................................................................................................................................................................................................. 171.000.00----------------------------------------1.00---------------
....................................................................................................................TACTAATCTTTTTTTCGCA................................................................................................................... 191.000.00--------------------1.00-----------------------------------
..........................................................................................................................................................GATTAAAATAAACCCTCTGT............................................................................ 201.000.00-------------------------------1.00------------------------