| (1) AGO1.ip OTHER.mut | (3) B-CELL | (1) BRAIN | (6) BREAST | (14) CELL-LINE | (2) CERVIX | (1) HEART | (4) LIVER | (1) OTHER | (5) SKIN |
| CCACTTTTCCCTCTTACTCTGCATCTCCTGTGTTCCACTTGGGATGACCCCTGTTGAGATACTTGGAGAGGAATAACTTCCCTGTGCACATTAATGAGACTGCCAGAAATAAAACGTTTATTTATGTGACTGTGAAACCAAATTTTCACGTGCATTACTAAATGATATCTTGGAATGGGTGGTTGGGGAATGTTTTTCAGGTTGAAAACATCCTCTTGCATGACCGAGGCCACTATGTCCTGTGTGACTT ...........................................................(((..((..((......))..)).))).(((((.....(((..((.....(((.....(((((((.(((..(((((((......)))))))..)))...)))))))....))).....))..)))....)))))......................................................... ..........................................................59.....................................................................................................................................194...................................................... | Size | Perfect hit | Total Norm | Perfect Norm | DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line) | SRR037937(GSM510475) 293cand2. (cell line) | SRR039616(GSM531979) HBV(+) Distal Tissue Sample 1. (liver) | SRR343336 | SRR060984(GSM569188) Human plasma cell [09-001]. (cell line) | SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line) | SRR015360(GSM380325) Plasma B cells (PC137). (B cell) | SRR033729(GSM497074) splenic MZL (Splenic414). (B cell) | SRR060983(GSM569187) Human pre-germinal center B cell [09-001]. (cell line) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR330914(SRX091752) tissue: normal skindisease state: normal. (skin) | SRR039620(GSM531983) HBV(+) Adjacent Tissue Sample 2. (liver) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR191554(GSM715664) 99genomic small RNA (size selected RNA from t. (breast) | SRR040028(GSM532913) G026N. (cervix) | DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR330890(SRX091728) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR039617(GSM531980) HBV(+) Adjacent Tissue Sample 1. (liver) | SRR444069(SRX128917) Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin) | SRR330887(SRX091725) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | TAX577739(Rovira) total RNA. (breast) | SRR039636(GSM518473) THP1_cyto_sRNAs. (cell line) | SRR207114(GSM721076) "IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line) | SRR330899(SRX091737) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039635(GSM518472) THP1_nuc_sRNAs. (cell line) | SRR015448(SRR015448) cytoplasmic small RNAs. (breast) | SRR191415(GSM715525) 33genomic small RNA (size selected RNA from t. (breast) | SRR040012(GSM532897) G648N. (cervix) | TAX577589(Rovira) total RNA. (breast) | GSM450599(GSM450599) miRNA sequencing raw reads from post-mortem s. (brain) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR039637(GSM518474) THP1_total_sRNAs. (cell line) | TAX577743(Rovira) total RNA. (breast) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................................................TTGGAATGGGTGGTTGGGGAA............................................................ | 21 | 1 | 34.00 | 34.00 | 5.00 | 4.00 | - | - | - | 2.00 | 2.00 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | 1.00 | 1.00 | 1.00 | - | - | 1.00 | 1.00 | - | 1.00 | 1.00 | 1.00 | - | - | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | - | - | 1.00 | 1.00 | - |
| .........................................................................................................................................................................TTGGAATGGGTGGTTGGGGAAT........................................................... | 22 | 1 | 5.00 | 5.00 | 2.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................TTGGAATGGGTGGTTGGG............................................................... | 18 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................TGGAGAGGAATAACTCTG......................................................................................................................................................................... | 18 | 2.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................TGAAAACATCCTCTTTTTG............................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ............................................................................................................ATAAAACGTTTATTTATTA........................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | |
| ..............................................................................................................................................................................ATGGGTGGTTGGGGATTG.......................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................TGGAATGGGTGGTTGGGGAA............................................................ | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................CCTCTTGCATGACCGAGGC.................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................TTGGAATGGGTGGTTGGGGCAT........................................................... | 22 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................CGAGGCCACTATGTCC.......... | 16 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................ATCCTCTTGCATGACCGAGGCCA.................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................CTCTTGCATGACCGAGGCCA.................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .........................................................................................................................................................................TTGGAATGGGTGGTTGGGGTA............................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................CTCTTGCATGACCGAGGCCACTTTC............. | 25 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................TTGGAATGGGTGGTTGGGG.............................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................TTGGAATGGGTGGTTGGGGAATGTTTTTCAG.................................................. | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| CCACTTTTCCCTCTTACTCTGCATCTCCTGTGTTCCACTTGGGATGACCCCTGTTGAGATACTTGGAGAGGAATAACTTCCCTGTGCACATTAATGAGACTGCCAGAAATAAAACGTTTATTTATGTGACTGTGAAACCAAATTTTCACGTGCATTACTAAATGATATCTTGGAATGGGTGGTTGGGGAATGTTTTTCAGGTTGAAAACATCCTCTTGCATGACCGAGGCCACTATGTCCTGTGTGACTT ...........................................................(((..((..((......))..)).))).(((((.....(((..((.....(((.....(((((((.(((..(((((((......)))))))..)))...)))))))....))).....))..)))....)))))......................................................... ..........................................................59.....................................................................................................................................194...................................................... | Size | Perfect hit | Total Norm | Perfect Norm | DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line) | SRR037937(GSM510475) 293cand2. (cell line) | SRR039616(GSM531979) HBV(+) Distal Tissue Sample 1. (liver) | SRR343336 | SRR060984(GSM569188) Human plasma cell [09-001]. (cell line) | SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line) | SRR015360(GSM380325) Plasma B cells (PC137). (B cell) | SRR033729(GSM497074) splenic MZL (Splenic414). (B cell) | SRR060983(GSM569187) Human pre-germinal center B cell [09-001]. (cell line) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR330914(SRX091752) tissue: normal skindisease state: normal. (skin) | SRR039620(GSM531983) HBV(+) Adjacent Tissue Sample 2. (liver) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR191554(GSM715664) 99genomic small RNA (size selected RNA from t. (breast) | SRR040028(GSM532913) G026N. (cervix) | DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR330890(SRX091728) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR039617(GSM531980) HBV(+) Adjacent Tissue Sample 1. (liver) | SRR444069(SRX128917) Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin) | SRR330887(SRX091725) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | TAX577739(Rovira) total RNA. (breast) | SRR039636(GSM518473) THP1_cyto_sRNAs. (cell line) | SRR207114(GSM721076) "IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line) | SRR330899(SRX091737) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039635(GSM518472) THP1_nuc_sRNAs. (cell line) | SRR015448(SRR015448) cytoplasmic small RNAs. (breast) | SRR191415(GSM715525) 33genomic small RNA (size selected RNA from t. (breast) | SRR040012(GSM532897) G648N. (cervix) | TAX577589(Rovira) total RNA. (breast) | GSM450599(GSM450599) miRNA sequencing raw reads from post-mortem s. (brain) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR039637(GSM518474) THP1_total_sRNAs. (cell line) | TAX577743(Rovira) total RNA. (breast) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) |
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