uc002sdy.1_intron_1_0_chr2_67353523

TCATGTTTCGAGTCATTTTTAGGTAGTTGCTGCTTGGCATAGTGCACGGAACTACACTCTCTGTTAGGAACAACAAACTGAGGACAAAAGATAATCTATTTCTATTTCAAATTAGTGCAGAACTGAGCTCAGTGCCCATGTGCCATGGCGCTCCTTGCTTTCATCATCTTCTTTTTTTTTTTGCATCTTCTTTTTTTCAGGTTAGTTCCATGACTTGACTAAATGGGGGCTTGGCTATCTTGACAGAGTC .............................................................................................................................(((..((((.(((((...)))))))))....)))........................................................................................... .............................................................................................................................126.......................................................................200................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189786	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR189787	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189784	SRR189785	SRR039612(GSM531975) Human Normal Liver Tissue Sample 2. (liver)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line)
..................................................................................................................................AGTGCCCATGTGCCAGGCA.....................................................................................................	19		22.00	0.00	19.00	-	-	-	-	-	1.00	-	2.00	-	-	-	-
..................................................................................................................................AGTGCCCATGTGCCAGGC......................................................................................................	18		12.00	0.00	9.00	-	-	-	-	-	3.00	-	-	-	-	-	-
...................................................................................................................................................................TCATCTTCTTTTTTTTTTTG...................................................................	20	3	3.33	3.33	-	-	-	2.67	0.67	-	-	-	-	-	-	-	-
....................................................................................................................................................................CATCTTCTTTTTTTTTTCTTG.................................................................	21		3.00	0.00	-	-	1.00	-	2.00	-	-	-	-	-	-	-	-
....................................................................................................................................................................CATCTTCTTTTTTTTTAAAG..................................................................	20		3.00	0.00	-	-	2.00	-	-	1.00	-	-	-	-	-	-	-
....................................................................................................................................................................CATCTTCTTTTTTTTTTGG...................................................................	19		3.00	0.00	-	-	1.00	1.00	-	1.00	-	-	-	-	-	-	-
.........................................................................................................................................................................TCTTTTTTTTTTTGCACAGG.............................................................	20		2.00	0.00	-	2.00	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................TCATCTTCTTTTTTTTGCA....................................................................	19		2.00	0.00	-	2.00	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................ATCATCTTCTTTTTTTTTTG....................................................................	20		2.00	0.00	-	-	-	1.00	1.00	-	-	-	-	-	-	-	-
....................................................................................................................................................................CATCTTCTTTTTTTTTTCAAG.................................................................	21		2.00	0.00	-	-	1.00	-	-	1.00	-	-	-	-	-	-	-
....................................................................................................................................................................CATCTTCTTTTTTTTTTTGTC.................................................................	21		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................CATCTTCTTTTTTTTTTTATAG................................................................	22		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................TCATCTTCTTTTTTTTTTTCG..................................................................	21		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................CATCTTCTTTTTTTTTCTTG..................................................................	20		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................TCATCTTCTTTTTTTTAC.....................................................................	18		1.00	0.00	-	-	-	-	-	-	-	1.00	-	-	-	-	-
...................................................................................................................................................................TCATCTTCTTTTTTTTTTTAAG.................................................................	22		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-
...................................................................................................................................................................TCATCTTCTTTTTTTTTTTCTCA................................................................	23		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-
....................................................................................................................................................................CATCTTCTTTTTTTTTTTACTG................................................................	22		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-
...................................................................................................................................................................TCATCTTCTTTTTTTTTTAG...................................................................	20		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................CATCTTCTTTTTTTTTTTATG.................................................................	21		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-
...................................................................................................................................................................TCATCTTCTTTTTTTTTTAAG..................................................................	21		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................TCATCTTCTTTTTTTTTTTACT.................................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................................................................ATCTTCTTTTTTTTTTCTGG.................................................................	20		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................TCATCATCTTCTTTTTTTTTTTTG..................................................................	24		1.00	0.00	-	-	-	-	-	-	-	1.00	-	-	-	-	-
....................................................................................................................................................................CATCTTCTTTTTTTTTTCTTA.................................................................	21		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-
........................................................................................................................................................................TTCTTTTTTTTTTTGCGAGC..............................................................	20		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................TCATCTTCTTTTTTTTAAG....................................................................	19		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-
..................................................................................................................................................................ATCATCTTCTTTTTTTTTTTTG..................................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................................CTTTTTTTTTTTGCATCATGG...........................................................	21		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................................................................................TCTTCTTTTTTTTTTTGCAGTG..............................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................CATCTTCTTTTTTTTTCTAG..................................................................	20		1.00	0.00	-	-	-	-	-	-	-	-	-	1.00	-	-	-
...........................................................................................................................................................................TTTTTTTTTTTGCATCTTAAG..........................................................	21		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................ATCATCTTCTTTTTTTTTAA....................................................................	20		1.00	0.00	-	-	-	-	-	-	-	1.00	-	-	-	-	-
.........................................................................................................................................................................TCTTTTTTTTTTTGCATCAGG............................................................	21		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-
.........................................................................................................................................................................TCTTTTTTTTTTTGCATATGG............................................................	21		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................TCATCATCTTCTTTTTTTTTTTTTTG................................................................	26		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................CATCTTCTTTTTTTTTAG....................................................................	18		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-
................................................................................................................................................................TCATCATCTTCTTTTTTTTTTG....................................................................	22		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................CATCTTCTTTTTTTTTGAGC..................................................................	20		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................TCATCTTCTTTTTTTTTCTTG..................................................................	21		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-
......................................................................................................................................................................TCTTCTTTTTTTTTTTGCAGTTG.............................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................................................................................TGCATCTTCTTTTTTTTTTG.................................................	20		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................................................................CTCCTTGCTTTCATCATCTTCTTTTTTTTTTTTG..................................................................	34		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-
.................................................................................................................................CAGTGCCCATGTGCCAGGC......................................................................................................	19		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
........................................................................................................................................................................TTCTTTTTTTTTTTGCACAGG.............................................................	21		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................TCATCTTCTTTTTTTTTTTATG.................................................................	22		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................................................................ATCTTCTTTTTTTTTTGTGA.................................................................	20		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................................................................ATCTTCTTTTTTTTTTTGCATGAAG............................................................	25		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	1.00	-
........................................................................ACAAACTGAGGACAAA..................................................................................................................................................................	16	5	0.20	0.20	-	-	-	-	-	-	-	-	-	-	-	-	0.20
.................................................................................................................................................................CATCATCTTCTTTTTTTTTTTTTTG................................................................	25	5	0.20	0.20	-	-	-	0.20	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................CATCATCTTCTTTTTTTTTTTTG..................................................................	23	5	0.20	0.20	-	-	-	0.20	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................CATCATCTTCTTTTTTTTTTTTAA.................................................................	24	5	0.20	0.20	-	-	0.20	-	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................CATCATCTTCTTTTTTTTTTT....................................................................	21	5	0.20	0.20	-	-	0.20	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................TCATCATCTTCTTTTTTT........................................................................	18	7	0.14	0.14	-	-	-	0.14	-	-	-	-	-	-	-	-	-
.........................................................................................................................................................................................TCTTCTTTTTTTCAGGT................................................	17	8	0.12	0.12	-	0.12	-	-	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................CATCATCTTCTTTTTTTT.......................................................................	18	9	0.11	0.11	-	-	0.11	-	-	-	-	-	-	-	-	-	-

TCATGTTTCGAGTCATTTTTAGGTAGTTGCTGCTTGGCATAGTGCACGGAACTACACTCTCTGTTAGGAACAACAAACTGAGGACAAAAGATAATCTATTTCTATTTCAAATTAGTGCAGAACTGAGCTCAGTGCCCATGTGCCATGGCGCTCCTTGCTTTCATCATCTTCTTTTTTTTTTTGCATCTTCTTTTTTTCAGGTTAGTTCCATGACTTGACTAAATGGGGGCTTGGCTATCTTGACAGAGTC
.............................................................................................................................(((..((((.(((((...)))))))))....)))...........................................................................................
.............................................................................................................................126.......................................................................200................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189786

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR189787

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189784

SRR189785

SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

..................................................................................................................................AGTGCCCATGTGCCAGGCA.....................................................................................................

22.00

0.00

19.00

1.00

2.00

..................................................................................................................................AGTGCCCATGTGCCAGGC......................................................................................................

12.00

0.00

9.00

3.00

...................................................................................................................................................................TCATCTTCTTTTTTTTTTTG...................................................................

3.33

2.67

0.67

....................................................................................................................................................................CATCTTCTTTTTTTTTTCTTG.................................................................

3.00

0.00

1.00

2.00

....................................................................................................................................................................CATCTTCTTTTTTTTTAAAG..................................................................

3.00

0.00

2.00

1.00

....................................................................................................................................................................CATCTTCTTTTTTTTTTGG...................................................................

3.00

0.00

1.00

.........................................................................................................................................................................TCTTTTTTTTTTTGCACAGG.............................................................

2.00

0.00

2.00

...................................................................................................................................................................TCATCTTCTTTTTTTTGCA....................................................................

2.00

0.00

2.00

..................................................................................................................................................................ATCATCTTCTTTTTTTTTTG....................................................................

2.00

0.00

1.00

....................................................................................................................................................................CATCTTCTTTTTTTTTTCAAG.................................................................

2.00

0.00

1.00

....................................................................................................................................................................CATCTTCTTTTTTTTTTTGTC.................................................................

1.00

0.00

1.00

....................................................................................................................................................................CATCTTCTTTTTTTTTTTATAG................................................................

1.00

0.00

1.00

...................................................................................................................................................................TCATCTTCTTTTTTTTTTTCG..................................................................

1.00

0.00

1.00

....................................................................................................................................................................CATCTTCTTTTTTTTTCTTG..................................................................

1.00

0.00

1.00

...................................................................................................................................................................TCATCTTCTTTTTTTTAC.....................................................................

1.00

0.00

1.00

...................................................................................................................................................................TCATCTTCTTTTTTTTTTTAAG.................................................................

1.00

0.00

1.00

...................................................................................................................................................................TCATCTTCTTTTTTTTTTTCTCA................................................................

1.00

0.00

1.00

....................................................................................................................................................................CATCTTCTTTTTTTTTTTACTG................................................................

1.00

0.00

1.00

...................................................................................................................................................................TCATCTTCTTTTTTTTTTAG...................................................................

1.00

0.00

1.00

....................................................................................................................................................................CATCTTCTTTTTTTTTTTATG.................................................................

1.00

0.00

1.00

...................................................................................................................................................................TCATCTTCTTTTTTTTTTAAG..................................................................

1.00

0.00

1.00

...................................................................................................................................................................TCATCTTCTTTTTTTTTTTACT.................................................................

1.00

0.00

1.00

.....................................................................................................................................................................ATCTTCTTTTTTTTTTCTGG.................................................................

1.00

0.00

1.00

................................................................................................................................................................TCATCATCTTCTTTTTTTTTTTTG..................................................................

1.00

0.00

1.00

....................................................................................................................................................................CATCTTCTTTTTTTTTTCTTA.................................................................

1.00

0.00

1.00

........................................................................................................................................................................TTCTTTTTTTTTTTGCGAGC..............................................................

1.00

0.00

1.00

...................................................................................................................................................................TCATCTTCTTTTTTTTAAG....................................................................

1.00

0.00

1.00

..................................................................................................................................................................ATCATCTTCTTTTTTTTTTTTG..................................................................

1.00

0.00

1.00

..........................................................................................................................................................................CTTTTTTTTTTTGCATCATGG...........................................................

1.00

0.00

1.00

......................................................................................................................................................................TCTTCTTTTTTTTTTTGCAGTG..............................................................

1.00

0.00

1.00

....................................................................................................................................................................CATCTTCTTTTTTTTTCTAG..................................................................

1.00

0.00

1.00

...........................................................................................................................................................................TTTTTTTTTTTGCATCTTAAG..........................................................

1.00

0.00

1.00

..................................................................................................................................................................ATCATCTTCTTTTTTTTTAA....................................................................

1.00

0.00

1.00

.........................................................................................................................................................................TCTTTTTTTTTTTGCATCAGG............................................................

1.00

0.00

1.00

.........................................................................................................................................................................TCTTTTTTTTTTTGCATATGG............................................................

1.00

0.00

1.00

................................................................................................................................................................TCATCATCTTCTTTTTTTTTTTTTTG................................................................

1.00

0.00

1.00

....................................................................................................................................................................CATCTTCTTTTTTTTTAG....................................................................

1.00

0.00

1.00

................................................................................................................................................................TCATCATCTTCTTTTTTTTTTG....................................................................

1.00

0.00

1.00

....................................................................................................................................................................CATCTTCTTTTTTTTTGAGC..................................................................

1.00

0.00

1.00

...................................................................................................................................................................TCATCTTCTTTTTTTTTCTTG..................................................................

1.00

0.00

1.00

......................................................................................................................................................................TCTTCTTTTTTTTTTTGCAGTTG.............................................................

1.00

0.00

1.00

.....................................................................................................................................................................................TGCATCTTCTTTTTTTTTTG.................................................

1.00

0.00

1.00

......................................................................................................................................................CTCCTTGCTTTCATCATCTTCTTTTTTTTTTTTG..................................................................

1.00

0.00

1.00

.................................................................................................................................CAGTGCCCATGTGCCAGGC......................................................................................................

1.00

0.00

1.00

........................................................................................................................................................................TTCTTTTTTTTTTTGCACAGG.............................................................

1.00

0.00

1.00

...................................................................................................................................................................TCATCTTCTTTTTTTTTTTATG.................................................................

1.00

0.00

1.00

.....................................................................................................................................................................ATCTTCTTTTTTTTTTGTGA.................................................................

1.00

0.00

1.00

.....................................................................................................................................................................ATCTTCTTTTTTTTTTTGCATGAAG............................................................

1.00

0.00

1.00

........................................................................ACAAACTGAGGACAAA..................................................................................................................................................................

0.20

.................................................................................................................................................................CATCATCTTCTTTTTTTTTTTTTTG................................................................

0.20

.................................................................................................................................................................CATCATCTTCTTTTTTTTTTTTG..................................................................

0.20

.................................................................................................................................................................CATCATCTTCTTTTTTTTTTTTAA.................................................................

0.20

.................................................................................................................................................................CATCATCTTCTTTTTTTTTTT....................................................................

0.20

................................................................................................................................................................TCATCATCTTCTTTTTTT........................................................................

0.14

.........................................................................................................................................................................................TCTTCTTTTTTTCAGGT................................................

0.12

.................................................................................................................................................................CATCATCTTCTTTTTTTT.......................................................................

0.11