ID: uc002sbe.2_intron_36_0_chr2_61486912_r.3p
GENE: (43)
chr2:61486862-61487111-


(2)
AGO2.ip 		(3)
B-CELL 		(2)
BRAIN 		(5)
BREAST 		(22)
CELL-LINE 		(1)
HELA 		(2)
LIVER 		(2)
OTHER 		(14)
SKIN 		(1)
XRN.ip

Sense strand
AATAGCTGTATTTATGTAACAAAGCATTACAATTTTTAATGCTATAATTACTAAAGAATTGAATGTGTTGGTGTTTTTCTTTTATATAGCCAAAAGAATGAAAACAGATACAGTGTACATTGCAAGACTTTCTTTGCTAGAATGCCTAATTTACTACCATCATGTCTGTGTTTTTAATGGTGTTTTCTCTTGATTTTCAGTATTCAGAGGATATGAAGCACAAGACCACTCTTCTGGAGCTTCAGAAAAT
...............................................................((((((.((....(((((((........))))))).....)).)))))).........(((((......))))).((((((((.((..(((.((......))..)))..))....))))))))((((.(((.......))).)))).........................................
............................................................61...................................................................................................................................................210......................................
SizePerfect hitTotal NormPerfect NormSRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189784SRR029124(GSM416753)
HeLa. (hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR189782TAX577740(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR037931(GSM510469)
293GFP. (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR191479(GSM715589)
31genomic small RNA (size selected RNA from t. (breast)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
...........................................................................................................................................................................................TCTTGATTTTCAGTACGGA............................................19021.002.006.00-2.00-4.00-3.00------1.00-2.00-1.00--------------1.00------1.00-----------
...........................................................................................................................................................................................TCTTGATTTTCAGTACGG.............................................18016.002.009.00-3.00-------1.002.00-1.00-------------------------------------
...........................................................................................................................................................................................TCTTGATTTTCAGTACGC.............................................1808.002.00-7.00---------------------------1.00---------------------
...........................................................................................................................................................................................TCTTGATTTTCAGTACGCA............................................1904.002.00-1.00-----------------------1.00--------------------1.00-1.00--
............................................................................................................................................................................................................CAGAGGATATGAAGCACA............................1813.003.00----------------2.00-----------------1.00----------------
.........................................................................................................................................................................................TCTCTTGATTTTCAGTACGA.............................................203.000.00-----3.00---------------------------------------------
..........................................................................................................................................................................................................TTCAGAGGATATGAAGCA..............................1812.002.00--------------1.00----------------------1.00-------------
.........................................................................................................................................................................................................ATTCAGAGGATATGAAGCACAAGAC........................2512.002.00-------2.00-------------------------------------------
...........................................................................................................................................................................................TCTTGATTTTCAGTA................................................1502.002.00---------------------------1.00--1.00--------------------
...........................................................................................................................................................................................TCTTGATTTTCAGTACGT.............................................1802.002.00---------1.00-------------------------1.00---------------
............................................................................................................................................................................................................CAGAGGATATGAAGCACAAGA.........................2112.002.00------------------1.00-----------------1.00--------------
...........................................................................................................................................................................................TCTTGATTTTCAGTACGAG............................................1902.002.00---2.00-----------------------------------------------
............................................................................................................................................................................................................CAGAGGATATGAAGCACAAG..........................2012.002.00--------------------1.00----------1.00-------------------
.........................................................................................................................................................................................................ATTCAGAGGATATGAAGCACAAGACCACT....................2911.001.00----------------------------------------1.00----------
...........................................................................................................................................................................................TCTTGATTTTCAGTACGGC............................................1901.002.00------------1.00--------------------------------------
..........................................................................................................................................................................................................TTCAGAGGATATGAAGCACAAG..........................2211.001.00-------------------------------------------1.00-------
...........................................................................................................................................................................................TCTTGATTTTCAGTACGAT............................................1901.002.00---1.00-----------------------------------------------
.............................................................................................................................................................................................................AGAGGATATGAAGCACA............................1711.001.00------------------------1.00--------------------------
...........................................................................................................................................................................................TCTTGATTTTCAGTACGCC............................................1901.002.00---1.00-----------------------------------------------
.................................................................TGTTGGTGTTTTTCTTTGTC.....................................................................................................................................................................201.000.00------------------------------------------1.00--------
.............................................................................................................................................................................TTAATGGTGTTTTCTCTTGATTTTCAG..................................................2711.001.00----------------------------1.00----------------------
...........................................................................................................................................................................................TCTTGATTTTCAGTACGTA............................................1901.002.00-----------------1.00---------------------------------
...............................................................................................................................................................................................................AGGATATGAAGCACAAGAC........................1911.001.00--------------------------------------1.00------------
.......................................................................................................................................................................................................................AAGCACAAGACCACTATTG................191.000.00--------1.00------------------------------------------
...........................................................................................................................................................................................TCTTGATTTTCAGTATGTA............................................191.000.00--------------------------------------------1.00------
...........................................................................................................................................................................................TCTTGATTTTCAGTAGCGG............................................1901.002.00-------------------1.00-------------------------------
...............................................................................................................................................................................................................AGGATATGAAGCACAAGA.........................1811.001.00------------1.00--------------------------------------
...........................................................................................................................................................................................TCTTGATTTTCAGTACTT.............................................1801.002.00---------1.00-----------------------------------------
..TAGCTGTATTTATGTACT......................................................................................................................................................................................................................................181.000.00---------------------------------1.00-----------------
......................................................................................................................................................................................................AGTATTCAGAGGATATGAAGCACC............................241.000.00--------------------------1.00------------------------
...........................................................................................................................................................................................TCTTGATTTTCAGTACCA.............................................1801.002.00----------1.00----------------------------------------
...............................................................................................................................................................................................................AGGATATGAAGCACAAGACCACTCTTCTGGAGC..........3311.001.00-----------------------1.00---------------------------
............................................................................................................................................................................................................CAGAGGATATGAAGCACAAGT.........................2111.002.00---------------------1.00-----------------------------
...................................................................................................................................................................................................................................ACTCTTCTGGAGCTTCAGA....1911.001.00---------------------------------------------1.00-----
...........................................................................................................................................................................................TCTTGATTTTCAGTACGAC............................................1901.002.00---1.00-----------------------------------------------
.........................................................................................................................................................................................................ATTCAGAGGATATGAAGCACAAGA.........................2411.001.00-----------------------------------------------1.00---
......................................................................................................................................................................................................AGTATTCAGAGGATATGAAGCACAA...........................2511.001.00--------------1.00------------------------------------
..........................................................................................................................................................................................CTCTTGATTTTCAGTACG..............................................1840.500.25------------------0.25------------------------------0.25-
..........................................................................................................................................................................................CTCTTGATTTTCAGTACGA.............................................1940.250.25--------------------------------------------------0.25
..........................................................................................................................................................................................CTCTTGATTTTCAGTA................................................1640.250.25-------------------------------------------------0.25-

Antisense strand
AATAGCTGTATTTATGTAACAAAGCATTACAATTTTTAATGCTATAATTACTAAAGAATTGAATGTGTTGGTGTTTTTCTTTTATATAGCCAAAAGAATGAAAACAGATACAGTGTACATTGCAAGACTTTCTTTGCTAGAATGCCTAATTTACTACCATCATGTCTGTGTTTTTAATGGTGTTTTCTCTTGATTTTCAGTATTCAGAGGATATGAAGCACAAGACCACTCTTCTGGAGCTTCAGAAAAT
...............................................................((((((.((....(((((((........))))))).....)).)))))).........(((((......))))).((((((((.((..(((.((......))..)))..))....))))))))((((.(((.......))).)))).........................................
............................................................61...................................................................................................................................................210......................................
SizePerfect hitTotal NormPerfect NormSRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189784SRR029124(GSM416753)
HeLa. (hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR189782TAX577740(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR037931(GSM510469)
293GFP. (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR191479(GSM715589)
31genomic small RNA (size selected RNA from t. (breast)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
...............................................................................................................................................................................................................AGGATATGAAGCACAATG......................... 181.000.00--------1.00------------------------------------------
...............................................TTACTAAAGAATTGAAAG......................................................................................................................................................................................... 181.000.00----------------------1.00----------------------------
....................................................................................................................................................................................................................ATGAAGCACAAGACCC...................... 161.000.00-----------------------------------------1.00---------