ID: uc002sbe.2_intron_29_0_chr2_61472424_r.3p
GENE: (50)
chr2:61472374-61472623-


(1)
B-CELL
(1)
BRAIN
(13)
BREAST
(2)
CELL-LINE
(18)
CERVIX
(3)
HEART
(1)
HELA
(2)
LIVER
(2)
OTHER
(2)
SKIN

Sense strand
CTGATTATAAGGTGCTTAAGAATATGTTATAAAATTATATTTCCAATTTCTAGTAGATTAGAATTGTAAAAATAAGAACTTAGAATTTACCTCATGAAATAATTTGACACTTGTAACATTGGTTATTCAAAAAATAGTAGACATAATATGAAGATACTCATTATATGCATACTAGATTAATACTATATGCTCTATTTTAGGTATCTTTTTAATGATGCTGAGGTAAAACCTTTTGATTCTGCTCAACTTG
..................................................................................................................................(((((((........((((((.((...)).))))))(((((.(((.......)))))))).)))))))....................................................
.......................................................................................................................120.............................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR040043(GSM532928)
G428T. (cervix)
SRR040042(GSM532927)
G428N. (cervix)
SRR037937(GSM510475)
293cand2. (cell line)
GSM532880(GSM532880)
G659T. (cervix)
GSM532877(GSM532877)
G691N. (cervix)
GSM532876(GSM532876)
G547T. (cervix)
SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)
GSM532878(GSM532878)
G691T. (cervix)
SRR191575(GSM715685)
85genomic small RNA (size selected RNA from t. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR040024(GSM532909)
G613N. (cervix)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189784SRR040030(GSM532915)
G013N. (cervix)
SRR040010(GSM532895)
G529N. (cervix)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
GSM532871(GSM532871)
G652N. (cervix)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR191444(GSM715554)
109genomic small RNA (size selected RNA from . (breast)
SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)
GSM532881(GSM532881)
G696N. (cervix)
SRR191425(GSM715535)
141genomic small RNA (size selected RNA from . (breast)
SRR040031(GSM532916)
G013T. (cervix)
SRR040025(GSM532910)
G613T. (cervix)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR343335SRR040032(GSM532917)
G603N. (cervix)
SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR040035(GSM532920)
G001T. (cervix)
SRR191472(GSM715582)
120genomic small RNA (size selected RNA from . (breast)
GSM532885(GSM532885)
G850N. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR040027(GSM532912)
G220T. (cervix)
SRR040015(GSM532900)
G623T. (cervix)
............................................................................................................................ATTCAAAAAATAGTACCA............................................................................................................18277.000.00120.0081.0018.0010.008.005.003.002.002.00--2.002.002.00---1.001.001.001.001.001.00-1.001.001.001.001.001.001.00-1.001.00--1.001.001.00-1.001.001.00-1.00
............................................................................................................................ATTCAAAAAATAGTATCA............................................................................................................183.000.002.001.00-------------------------------------------
............................................................................................................................ATTCAAAAAATAGTACTA............................................................................................................182.000.002.00--------------------------------------------
............................................................................................................................................................................TAGATTAATACTATATGCTCT.........................................................2111.001.00---------------1.00-----------------------------
............................................................................................................................................................................TAGATTAATACTATATGCTCTATTTTAG..................................................2811.001.00-----------------------1.00---------------------
..............................................................................................................................................................................................................TTTTAATGATGCTGAGGTAAAA......................2211.001.00---------1.00-----------------------------------
............................................................................................................................ATTCAAAAAATAGTACCAA...........................................................................................................191.000.001.00--------------------------------------------
............................................................................................................................ATTCAAAAAATAGTACCC............................................................................................................181.000.00-------------------------------------------1.00-
...................................................................................................................................AAATAGTAGACATAATATGAAGATA..............................................................................................2511.001.00---------------------------------------1.00-----
..........................................................................................................................................................................................................ATCTTTTTAATGATGCTGAGGT..........................2211.001.00----------1.00----------------------------------
..................................................TAGTAGATTAGAATTGTG......................................................................................................................................................................................181.000.00--------------1.00------------------------------
..........................................................................................................................................................................................................ATCTTTTTAATGATGCTGCGGT..........................221.000.00----------1.00----------------------------------
..........................................................................................................................................................................................................................TGAGGTAAAACCTTTAGCA.............191.000.00----------------------------------1.00----------
...........................................................................................................................TATTCAAAAAATAGTACCA............................................................................................................191.000.001.00--------------------------------------------
..................................................................................................................................................................................................................AATGATGCTGAGGTAAAACC....................2011.001.00-----------------------------------1.00---------

Antisense strand
CTGATTATAAGGTGCTTAAGAATATGTTATAAAATTATATTTCCAATTTCTAGTAGATTAGAATTGTAAAAATAAGAACTTAGAATTTACCTCATGAAATAATTTGACACTTGTAACATTGGTTATTCAAAAAATAGTAGACATAATATGAAGATACTCATTATATGCATACTAGATTAATACTATATGCTCTATTTTAGGTATCTTTTTAATGATGCTGAGGTAAAACCTTTTGATTCTGCTCAACTTG
..................................................................................................................................(((((((........((((((.((...)).))))))(((((.(((.......)))))))).)))))))....................................................
.......................................................................................................................120.............................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR040043(GSM532928)
G428T. (cervix)
SRR040042(GSM532927)
G428N. (cervix)
SRR037937(GSM510475)
293cand2. (cell line)
GSM532880(GSM532880)
G659T. (cervix)
GSM532877(GSM532877)
G691N. (cervix)
GSM532876(GSM532876)
G547T. (cervix)
SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)
GSM532878(GSM532878)
G691T. (cervix)
SRR191575(GSM715685)
85genomic small RNA (size selected RNA from t. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR040024(GSM532909)
G613N. (cervix)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189784SRR040030(GSM532915)
G013N. (cervix)
SRR040010(GSM532895)
G529N. (cervix)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
GSM532871(GSM532871)
G652N. (cervix)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR191444(GSM715554)
109genomic small RNA (size selected RNA from . (breast)
SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)
GSM532881(GSM532881)
G696N. (cervix)
SRR191425(GSM715535)
141genomic small RNA (size selected RNA from . (breast)
SRR040031(GSM532916)
G013T. (cervix)
SRR040025(GSM532910)
G613T. (cervix)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR343335SRR040032(GSM532917)
G603N. (cervix)
SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR040035(GSM532920)
G001T. (cervix)
SRR191472(GSM715582)
120genomic small RNA (size selected RNA from . (breast)
GSM532885(GSM532885)
G850N. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR040027(GSM532912)
G220T. (cervix)
SRR040015(GSM532900)
G623T. (cervix)
....................................................................................................................................................................................................................TGATGCTGAGGTAAAAAATC.................. 201.000.00-------------------------------1.00-------------
......................................ATTTCCAATTTCTAGTGATC................................................................................................................................................................................................ 201.000.00---------1.00-----------------------------------
..........GGTGCTTAAGAATATCTAG............................................................................................................................................................................................................................. 191.000.00----------------1.00----------------------------