| (1) AGO2.ip | (1) B-CELL | (2) BRAIN | (4) BREAST | (12) CELL-LINE | (2) CERVIX | (3) HEART | (2) HELA | (5) LIVER | (2) OTHER | (12) SKIN | (1) XRN.ip |
| TGTTTAAAACCCTTCATGGATCAGCATTATTTCAAAGAGGACAAACACAGGTAATTTATATAAAAAGCTCTAATTATTTGCTAAATTAAGATTGTTTAATTAGATCTAATAGAAGTACATTAGTAGATGCTGTAGGTTTTGTCATATGGTGTATATTATTTATTTAAATTAATATCTGGCGGTTCTTGTTTGTTTTGTTTGAGACAGGTTCTTGTTTGTCACTCAGGCTCCAGTGCAGTGGCACAATCAT ....................................................................................................................(((.....(((.(((((((((.(((......((((.........)))).....))).))))).)))))))....)))......................................................... ..................................................................................................................115..................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR330864(SRX091702) tissue: skin psoriatic involveddisease state:. (skin) | SRR189782 | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR191622(GSM715732) 175genomic small RNA (size selected RNA from . (breast) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR039616(GSM531979) HBV(+) Distal Tissue Sample 1. (liver) | SRR189784 | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | SRR330912(SRX091750) tissue: normal skindisease state: normal. (skin) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain) | SRR039618(GSM531981) HBV(+) Side Tissue Sample 1. (liver) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | SRR037943(GSM510481) 293DcrTN. (cell line) | SRR033724(GSM497069) L428 cell line (L428). (B cell) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR040039(GSM532924) G531T. (cervix) | SRR040022(GSM532907) G575N. (cervix) | SRR330861(SRX091699) tissue: skin psoriatic involveddisease state:. (skin) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR330868(SRX091706) tissue: skin psoriatic involveddisease state:. (skin) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR060168(GSM565978) 5-8F_nucleus. (cell line) | SRR060169(GSM565979) 5-8F_cytoplasm. (cell line) | SRR330869(SRX091707) tissue: skin psoriatic involveddisease state:. (skin) | TAX577453(Rovira) total RNA. (breast) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) | SRR330916(SRX091754) tissue: normal skindisease state: normal. (skin) | SRR330886(SRX091724) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330895(SRX091733) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR191413(GSM715523) 28genomic small RNA (size selected RNA from t. (breast) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR444054(SRX128902) Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................................GCGGTTCTTGTTTGTGGA...................................................... | 18 | 28.00 | 0.00 | 1.00 | 9.00 | 4.00 | - | 3.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | 1.00 | 1.00 | - | 1.00 | 1.00 | - | 1.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | |
| .......................................................................................................................TTAGTAGATGCTGTAGG.................................................................................................................. | 17 | 1 | 12.00 | 12.00 | 12.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................GCGGTTCTTGTTTGTGGAT..................................................... | 19 | 10.00 | 0.00 | - | 1.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| ..................................................................................................................................................................................GCGGTTCTTGTTTGTGG....................................................... | 17 | 3.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| .................................AAAGAGGACAAACACAGG....................................................................................................................................................................................................... | 18 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..............CATGGATCAGCATTATTT.......................................................................................................................................................................................................................... | 18 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................CATTATTTCAAAGAGGACA............................................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............CATGGATCAGCATTATTTCAAAG..................................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ............................................................................................................................AGATGCTGTAGGTTTTAGTG.......................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............TCATGGATCAGCATTATTTCAAAGAGGACA............................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................GCGGTTCTTGTTTGTGGCT..................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ...........CTTCATGGATCAGCAT............................................................................................................................................................................................................................... | 16 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................GAGACAGGTTCTTGTTAGAA.............................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................GAGGACAAACACAGGTGAA................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................AAAGAGGACAAACACAGGTG..................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................TTAGTAGATGCTGTAAA.................................................................................................................. | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ......................AGCATTATTTCAAAGAGGACAAACACAGGTGCT................................................................................................................................................................................................... | 33 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................AGAGGACAAACACAGGTGC.................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................AAAGAGGACAAACACAGGTAATTTA................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................TTCTTGTTTGTTTTGTTTCTG............................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................ATATTATTTATTTAAATTAATATCTG........................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................CAAAGAGGACAAACACAGGT...................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................AGTAGATGCTGTAGGTTTTGTCAT......................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................GATGCTGTAGGTTTTGTCATATG...................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................ATATCTGGCGGTTCTTGTTTGTTTTGCTT.................................................. | 29 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................CTGGCGGTTCTTGTTACGT........................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................GCGGTTCTTGTTTGTGGG...................................................... | 18 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................ATCAGCATTATTTCAAAGAGGACA............................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................GTTCTTGTTTGTTTTGTTTTTGC.............................................. | 23 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................AGCATTATTTCAAAGAGGACA............................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................CAAAGAGGACAAACACAG........................................................................................................................................................................................................ | 18 | 3 | 0.67 | 0.67 | - | 0.67 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................AATATCTGGCGGTTC................................................................. | 15 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| ............................ATTTCAAAGAGGACAAACACAG........................................................................................................................................................................................................ | 22 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................GATGCTGTAGGTTTT.............................................................................................................. | 15 | 8 | 0.12 | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 |
| TGTTTAAAACCCTTCATGGATCAGCATTATTTCAAAGAGGACAAACACAGGTAATTTATATAAAAAGCTCTAATTATTTGCTAAATTAAGATTGTTTAATTAGATCTAATAGAAGTACATTAGTAGATGCTGTAGGTTTTGTCATATGGTGTATATTATTTATTTAAATTAATATCTGGCGGTTCTTGTTTGTTTTGTTTGAGACAGGTTCTTGTTTGTCACTCAGGCTCCAGTGCAGTGGCACAATCAT ....................................................................................................................(((.....(((.(((((((((.(((......((((.........)))).....))).))))).)))))))....)))......................................................... ..................................................................................................................115..................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR330864(SRX091702) tissue: skin psoriatic involveddisease state:. (skin) | SRR189782 | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR191622(GSM715732) 175genomic small RNA (size selected RNA from . (breast) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR039616(GSM531979) HBV(+) Distal Tissue Sample 1. (liver) | SRR189784 | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | SRR330912(SRX091750) tissue: normal skindisease state: normal. (skin) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain) | SRR039618(GSM531981) HBV(+) Side Tissue Sample 1. (liver) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | SRR037943(GSM510481) 293DcrTN. (cell line) | SRR033724(GSM497069) L428 cell line (L428). (B cell) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR040039(GSM532924) G531T. (cervix) | SRR040022(GSM532907) G575N. (cervix) | SRR330861(SRX091699) tissue: skin psoriatic involveddisease state:. (skin) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR330868(SRX091706) tissue: skin psoriatic involveddisease state:. (skin) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR060168(GSM565978) 5-8F_nucleus. (cell line) | SRR060169(GSM565979) 5-8F_cytoplasm. (cell line) | SRR330869(SRX091707) tissue: skin psoriatic involveddisease state:. (skin) | TAX577453(Rovira) total RNA. (breast) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) | SRR330916(SRX091754) tissue: normal skindisease state: normal. (skin) | SRR330886(SRX091724) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330895(SRX091733) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR191413(GSM715523) 28genomic small RNA (size selected RNA from t. (breast) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR444054(SRX128902) Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................TAAGATTGTTTAATTTATT................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................TGTTTGAGACAGGTTCCA..................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................................................CTCAGGCTCCAGTGCAGTGGCAAA..... | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................TGTTTGAGACAGGTTCCAA.................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |