ID: uc002rye.2_intron_7_0_chr2_55255357_r.5p
GENE: (1)
chr2:55276681-55276930-


(2)
AGO1.ip
(2)
AGO2.ip
(1)
AGO3.ip
(7)
B-CELL
(1)
BRAIN
(9)
BREAST
(23)
CELL-LINE
(9)
CERVIX
(5)
HEART
(5)
HELA
(1)
LIVER
(3)
OTHER
(41)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
CCCCTCCACCCCGGCCGCGCCCAAGCGCAGGGGCTCCTCGGGCTCAGTGGGTGAGTGCCGCGACCTCTCGCTTCGCGCCGCCCCTCGCGCCCCTCCCTCTTTTGTGTGCAGCCCCAGATGCTTTGGGCTGGTCCCTCCTCTCCGCCCCGAGGGCGCTTTGTCTGCGGACTTCGGGGCGATGGCGCCCCGTCTGGTTGGAAGCGCGGGGAGAAGGGTGGGGCGGCCCTTGGAGCCCGGGTTTGTTCTTATT
......................................................................................(((((.................((((((.((....)).))))))............((((((((((.(((.......)))..))))))))))..))))).................................................................
...........................................................................76.............................................................................................................187.............................................................
SizePerfect hitTotal NormPerfect NormSRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR040016(GSM532901)
G645N. (cervix)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029128(GSM416757)
H520. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040012(GSM532897)
G648N. (cervix)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR040040(GSM532925)
G612N. (cervix)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
GSM359188(GSM359188)
HepG2_2pM_2. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM359175(GSM359175)
hela_5_pct. (hela)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR040009(GSM532894)
G727T. (cervix)
GSM532874(GSM532874)
G699T. (cervix)
SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
GSM532881(GSM532881)
G696N. (cervix)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
TAX577741(Rovira)
total RNA. (breast)
SRR191418(GSM715528)
40genomic small RNA (size selected RNA from t. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
TAX577743(Rovira)
total RNA. (breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532871(GSM532871)
G652N. (cervix)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
...................................................................................................................................................................GCGGACTTCGGGGCGATGGC...................................................................2016.006.00--------2.00-----------------1.00---------------1.00----------------1.00-------------------------------1.00--------------
........................................................................................................................................................................CTTCGGGGCGATGGCGCCCCGTCTGG........................................................2616.006.00-------------------3.00--3.00-----------------------------------------------------------------------------------
............................................................................................................................................................................................................................CGGCCCTTGGAGCCCGGG............1814.004.00------4.00---------------------------------------------------------------------------------------------------
................................................................................CCCCTCGCGCCCCTCCCCC.......................................................................................................................................................1934.000.67---------1.00--------------------------1.001.00-----------------------------1.00--------------------------------------
................................................................................CCCCTCGCGCCCCTCCCCCGC.....................................................................................................................................................2133.000.67------------1.00--------------1.00-------------1.00----------------------------------------------------------------
............................................................................................................................................................................................................GGGGAGAAGGGTGGGGGCG...........................193.000.00---------2.00------------------------------------------1.00-----------------------------------------------------
..CCTCCACCCCGGCCGCGC......................................................................................................................................................................................................................................1813.003.00----------3.00-----------------------------------------------------------------------------------------------
........................................................................................................................................................................................................GCGCGGGGAGAAGGGTC.................................173.000.00------------------------------------1.00----------------------------1.00--------1.00-------------------------------
................................................................................CCCCTCGCGCCCCTCCCC........................................................................................................................................................1833.000.67------------2.00------------------1.00--------------------------------------------------------------------------
............................................................................................................................................................................................................GGGGAGAAGGGTGGGGGCGG..........................202.000.00---------1.00------------------------1.00-----------------------------------------------------------------------
...............................................................................................................................................................GTCTGCGGACTTCGGGGCGATGGCGC.................................................................2612.002.00---------------2.00------------------------------------------------------------------------------------------
...............................GGCTCCTCGGGCTCAGTGGT.......................................................................................................................................................................................................202.000.00------------------2.00---------------------------------------------------------------------------------------
..................................................................................................................................................................TGCGGACTTCGGGGCGAT......................................................................1812.002.00------2.00---------------------------------------------------------------------------------------------------
.......................AGCGCAGGGGCTCCTCGGGCTCAGTGGACG.....................................................................................................................................................................................................302.000.00-------2.00--------------------------------------------------------------------------------------------------
.......................AGCGCAGGGGCTCCTCGGGCTCAGTGGTC......................................................................................................................................................................................................292.000.00-------2.00--------------------------------------------------------------------------------------------------
.................................................................................................................................................................CTGCGGACTTCGGGGCGATGGAA..................................................................232.000.00--------------------2.00-------------------------------------------------------------------------------------
....................................................................................................................................................................................................................GGGTGGGGCGGCCCTTGGAGCCCGG.............2512.002.00--------------------------------------2.00-------------------------------------------------------------------
................................................................................................................................................................TCTGCGGACTTCGGGGCGATGGA...................................................................2312.001.00----------------------------2.00-----------------------------------------------------------------------------
....................................................................................................................................................................CGGACTTCGGGGCGATGGCG..................................................................2012.002.00--------2.00-------------------------------------------------------------------------------------------------
....................................................................................................................GATGCTTTGGGCTGGTCC....................................................................................................................1811.001.00---------------------------------1.00------------------------------------------------------------------------
.......................AGCGCAGGGGCTCCTCGGGCTCAGTGGC.......................................................................................................................................................................................................281.000.00---------------------------------------1.00------------------------------------------------------------------
.................................................................................................................................................................CTGCGGACTTCGGGGCGATGGCGCCCCG.............................................................2811.001.00------------------------------------------------------------------------------------------1.00---------------
.................................................................................................................................................................CTGCGGACTTCGGGGCGAT......................................................................1911.001.00------------------------------------------------1.00---------------------------------------------------------
................................................................................................................................................................TCTGCGGACTTCGGGGCGATA.....................................................................211.000.00--------------------------------------------------------1.00-------------------------------------------------
...........................CAGGGGCTCCTCGGGCTCAGTG.........................................................................................................................................................................................................2211.001.00--------1.00-------------------------------------------------------------------------------------------------
.......................AGCGCAGGGGCTCCTCGG.................................................................................................................................................................................................................1811.001.00-----------------------------------------------------1.00----------------------------------------------------
..........................GCAGGGGCTCCTCGGGCTC.............................................................................................................................................................................................................1911.001.00----------1.00-----------------------------------------------------------------------------------------------
............................AGGGGCTCCTCGGGCTCAGTGGATGA....................................................................................................................................................................................................261.000.00-------------1.00--------------------------------------------------------------------------------------------
....................................................................................................................................................................CGGACTTCGGGGCGATGG....................................................................1811.001.00--------------------------1.00-------------------------------------------------------------------------------
................................................................................................................................................................TCTGCGGACTTCGGGGCGATGG....................................................................2211.001.00----------------------------------------------1.00-----------------------------------------------------------
...............................GGCTCCTCGGGCTCAGTGGATG.....................................................................................................................................................................................................221.000.00----------1.00-----------------------------------------------------------------------------------------------
.........................................................................................................................................................................TTCGGGGCGATGGCGCCCCG.............................................................2011.001.00----------------------------------------------------------------------1.00-----------------------------------
...............................GGCTCCTCGGGCTCAG...........................................................................................................................................................................................................1611.001.00--1.00-------------------------------------------------------------------------------------------------------
..................................TCCTCGGGCTCAGTGGTTG.....................................................................................................................................................................................................191.000.00------------------------------------------------------------------1.00---------------------------------------
.................................................................................................................................................................CTGCGGACTTCGGGGCGATGGC...................................................................2211.001.00---------------------------------------------------------------------------------------------1.00------------
.........................................................CCGCGACCTCTCGCTGGC...............................................................................................................................................................................181.000.00----------------------------------------------------------------1.00-----------------------------------------
................................................................................CCCCTCGCGCCCCTCCCCCG......................................................................................................................................................2031.000.67-------------------------------------1.00--------------------------------------------------------------------
.......................AGCGCAGGGGCTCCTCGGGCT..............................................................................................................................................................................................................2111.001.00----------------1.00-----------------------------------------------------------------------------------------
....................................................................................................................................................................CGGACTTCGGGGCGATGGCTCGT...............................................................231.000.00---------------------------------------------------------------------1.00------------------------------------
............................................................................................................................................................................................................GGGGAGAAGGGTGGGGGGC...........................191.000.00---------------------------------1.00------------------------------------------------------------------------
................................GCTCCTCGGGCTCAGTGGTTG.....................................................................................................................................................................................................211.000.00-----------------------------------------------------------------------1.00----------------------------------
....................................................................................................................................................................................................................GGGTGGGGCGGCCCTTGGA...................1911.001.00------------------------------1.00---------------------------------------------------------------------------
...................................CCTCGGGCTCAGTGGTTGT....................................................................................................................................................................................................191.000.00------------------1.00---------------------------------------------------------------------------------------
........................................................................................................................................................................................CCCCGTCTGGTTGGA...................................................1511.001.00-------------1.00--------------------------------------------------------------------------------------------
.........................CGCAGGGGCTCCTCGGGCTCAGTGG........................................................................................................................................................................................................2511.001.00---1.00------------------------------------------------------------------------------------------------------
................................................................CTCTCGCTTCGCGCCAAG........................................................................................................................................................................181.000.00-----------------------------------------------1.00----------------------------------------------------------
.........................................................................................................................................CTCTCCGCCCCGAGGGCGCTTTGTCTGCGGACTT...............................................................................3411.001.00------------------------------------------------------1.00---------------------------------------------------
..........................................................................................................................................................GCTTTGTCTGCGGACTTCGGG...........................................................................2111.001.00-----------------1.00----------------------------------------------------------------------------------------
..............................................................................................................................................................................................................GGAGAAGGGTGGGGCGGCCGG.......................211.000.00---------1.00------------------------------------------------------------------------------------------------
...................................................................................................................................................................GCGGACTTCGGGGCGATGGCG..................................................................2111.001.00---------------1.00------------------------------------------------------------------------------------------
............................................................................................................................................................TTTGTCTGCGGACTTCGGGGC.........................................................................2111.001.00---------------------------------------------------1.00------------------------------------------------------
........................................................................................................................................................................................................GCGCGGGGAGAAGGGTCGG...............................191.000.00-------------------------------------------------------1.00--------------------------------------------------
................................GCTCCTCGGGCTCAGTGGTT......................................................................................................................................................................................................201.000.00---------------------1.00------------------------------------------------------------------------------------
...............................................................................................................................................................GTCTGCGGACTTCGGGGCGATGGCG..................................................................2511.001.00--------1.00-------------------------------------------------------------------------------------------------
.................CGCCCAAGCGCAGGGGCTCCTCGGGCTCAGTGG........................................................................................................................................................................................................3311.001.00-----------------------------------1.00----------------------------------------------------------------------
............................................................................................................................................................................................................................CGGCCCTTGGAGCCCCGG............181.000.00------1.00---------------------------------------------------------------------------------------------------
.........................CGCAGGGGCTCCTCGGGCTCAG...........................................................................................................................................................................................................2211.001.00-------1.00--------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................CGCGGGGAGAAGGGTGGGAA.............................201.000.00-----------------------1.00----------------------------------------------------------------------------------
................................................................................................................................................................TCTGCGGACTTCGGGGCGATGGC...................................................................2311.001.00--------------------------------------------1.00-------------------------------------------------------------
..................................................................................................................................................................................................................AAGGGTGGGGCGGCCCTTG.....................1911.001.00-------------------------1.00--------------------------------------------------------------------------------
.........................................................................................................................................................................................CCCGTCTGGTTGGAAGCGCGG............................................2111.001.00--------------------------------1.00-------------------------------------------------------------------------
......................................................................................................................................................................GACTTCGGGGCGATGGCG..................................................................1811.001.00-----------------------1.00----------------------------------------------------------------------------------
.................................CTCCTCGGGCTCAGTGGATG.....................................................................................................................................................................................................201.000.00-------------------------------1.00--------------------------------------------------------------------------
......................................................................................................................................................................................................AAGCGCGGGGAGAAGGGTGGG...............................2111.001.00--------------------------------------------------------------------------------1.00-------------------------
....................................................................................................................................................................CGGACTTCGGGGCGATGGCGCCCCGTC...........................................................2711.001.00----------------1.00-----------------------------------------------------------------------------------------
...............................................................................GCCCCTCGCGCCCCTCCCC........................................................................................................................................................191.000.00-----------------------------------------------------------------------------------------1.00----------------
..................................................................................................................................................................TGCGGACTTCGGGGCGATGGC...................................................................2111.001.00----------------------------------------------------------------------------------1.00-----------------------
........................................................................................................................................................................................CCCCGTCTGGTTGGATGCC...............................................1911.001.00----------------------------------------------------------------------------1.00-----------------------------
................................GCTCCTCGGGCTCAGTGGG.......................................................................................................................................................................................................1911.001.00-----------------------------------------------------------------------------------1.00----------------------
....................................................................................................................................................GAGGGCGCTTTGTCTGCGGA..................................................................................2011.001.00-------------------------------------------------------------------------1.00--------------------------------
................GCGCCCAAGCGCAGGGGC........................................................................................................................................................................................................................1811.001.00------------------------------------------------------------------------1.00---------------------------------
.............................GGGGCTCCTCGGGCTCAGTGGATGA....................................................................................................................................................................................................251.000.00-----------------------------------1.00----------------------------------------------------------------------
................GCGCCCAAGCGCAGGGGCTCC.....................................................................................................................................................................................................................2111.001.00---------------------1.00------------------------------------------------------------------------------------
..................................................................................................................CAGATGCTTTGGGCTGGTCCC...................................................................................................................2111.001.00--------------1.00-------------------------------------------------------------------------------------------
..............CCGCGCCCAAGCGCAGG...........................................................................................................................................................................................................................1711.001.00----------------------------------------1.00-----------------------------------------------------------------
.......................AGCGCAGGGGCTCCTCGGGCTCAGTGGCCG.....................................................................................................................................................................................................301.000.00---------------------------------------1.00------------------------------------------------------------------
........................................................................................................................................CCTCTCCGCCCCGAGGGC................................................................................................1811.001.00----------------1.00-----------------------------------------------------------------------------------------
.................................................................................................................................................................CTGCGGACTTCGGGGCGA.......................................................................1811.001.00---------------------------------------------------------------------------------------1.00------------------
.......................AGCGCAGGGGCTCCTCGGGCTCAGC..........................................................................................................................................................................................................251.000.00-------1.00--------------------------------------------------------------------------------------------------
......................................CGGGCTCAGTGGGTGTTGA.................................................................................................................................................................................................191.000.00------------------------------------------------------------------------------------1.00---------------------
....................CCAAGCGCAGGGGCTCCTCGGGCTCAGTGG........................................................................................................................................................................................................3011.001.00--------------------1.00-------------------------------------------------------------------------------------
........................................................................................................................................................................................................GCGCGGGGAGAAGGGTCGGG..............................201.000.00-------------------------------------------1.00--------------------------------------------------------------
..........................................................................................................................................................................................................GCGGGGAGAAGGGTGGGGCGGC..........................2211.001.00---1.00------------------------------------------------------------------------------------------------------
...........................CAGGGGCTCCTCGGGCTCAGTGGT.......................................................................................................................................................................................................241.000.00------------------------------------------------------------------------------1.00---------------------------
...........................................................................................................................................................................................................CGGGGAGAAGGGTGGTTA.............................181.000.00-----------------1.00----------------------------------------------------------------------------------------
..............................................................................................................................................................................................CTGGTTGGAAGCGCGGGGA.........................................1911.001.00--------------------------------------------------------------1.00-------------------------------------------
..............CCGCGCCCAAGCGCAGGGGC........................................................................................................................................................................................................................2011.001.00-------------1.00--------------------------------------------------------------------------------------------
.............................GGGGCTCCTCGGGCTCAGTGGTTG.....................................................................................................................................................................................................241.000.00---------------------1.00------------------------------------------------------------------------------------
.................................................................................................................................................................CTGCGGACTTCGGGGCGATGGCG..................................................................2311.001.00-----------------1.00----------------------------------------------------------------------------------------
...CTCCACCCCGGCCGCG.......................................................................................................................................................................................................................................1611.001.00------------1.00---------------------------------------------------------------------------------------------
................................................................................CCCCTCGCGCCCCTCCC.........................................................................................................................................................1730.670.67---------------------------0.33---------------0.33--------------------------------------------------------------
................................................................................................................................................................................................................AGAAGGGTGGGGCGGC..........................1620.500.50-----------------------------------------------------------------------------------------------0.50----------
.................................................................................................................................................................................................................................CTTGGAGCCCGGGTT..........1530.330.33--------------------------------------------0.33-------------------------------------------------------------
.................................................................................................................................................................................................................................CTTGGAGCCCGGGTTCG........1730.330.33---0.33------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................GAAGGGTGGGGCGGC..........................1540.250.25--------------------------------------------------------------------------------------------------0.25-------
..................................................................................CCTCGCGCCCCTCCC.........................................................................................................................................................1590.220.22---------------------------------------------0.22------------------------------------------------------------
.........................................................................................................................................................................................................CGCGGGGAGAAGGGTC.................................1650.200.20----------------------------------------------------------------------------------------------------0.20-----
.............................................................................................................................................................................................................GGGAGAAGGGTGGGGCGG...........................1850.200.20------------------------------------------------------------------------------------------------------0.20---
.........................................................................................................................................................................................................CGCGGGGAGAAGGGTCG................................1750.200.20-----------------------------------------------------------------------------------------------------0.20----
.........................................................................................................................................................................................................CGCGGGGAGAAGGGT..................................1550.200.20---------------------------------------------------------------------------------------------------0.20------
.................................................................................CCCTCGCGCCCCTCCC.........................................................................................................................................................1660.170.17--0.17-------------------------------------------------------------------------------------------------------
.................................................................................CCCTCGCGCCCCTCCCCCGC.....................................................................................................................................................2060.170.17--------------------------------------------------------------------------------------------------------0.17-

Antisense strand
CCCCTCCACCCCGGCCGCGCCCAAGCGCAGGGGCTCCTCGGGCTCAGTGGGTGAGTGCCGCGACCTCTCGCTTCGCGCCGCCCCTCGCGCCCCTCCCTCTTTTGTGTGCAGCCCCAGATGCTTTGGGCTGGTCCCTCCTCTCCGCCCCGAGGGCGCTTTGTCTGCGGACTTCGGGGCGATGGCGCCCCGTCTGGTTGGAAGCGCGGGGAGAAGGGTGGGGCGGCCCTTGGAGCCCGGGTTTGTTCTTATT
......................................................................................(((((.................((((((.((....)).))))))............((((((((((.(((.......)))..))))))))))..))))).................................................................
...........................................................................76.............................................................................................................187.............................................................
SizePerfect hitTotal NormPerfect NormSRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR040016(GSM532901)
G645N. (cervix)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029128(GSM416757)
H520. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040012(GSM532897)
G648N. (cervix)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR040040(GSM532925)
G612N. (cervix)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
GSM359188(GSM359188)
HepG2_2pM_2. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM359175(GSM359175)
hela_5_pct. (hela)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR040009(GSM532894)
G727T. (cervix)
GSM532874(GSM532874)
G699T. (cervix)
SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
GSM532881(GSM532881)
G696N. (cervix)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
TAX577741(Rovira)
total RNA. (breast)
SRR191418(GSM715528)
40genomic small RNA (size selected RNA from t. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
TAX577743(Rovira)
total RNA. (breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532871(GSM532871)
G652N. (cervix)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
...........................................................................CGCCGCCCCTCGCGCCCGCG........................................................................................................................................................... 2065.000.0026.0014.007.008.003.001.00-----2.00-------------2.00-------------------1.00----1.00-------------------------------------------------------
...........................................................................CGCCGCCCCTCGCGCCCGCGG.......................................................................................................................................................... 2162.000.0023.0012.0010.002.005.005.00-----1.001.00--------------1.00-1.00----------------------------------------------------------1.00-----------------
...........................................................................CGCCGCCCCTCGCGCCCGC............................................................................................................................................................ 1913.000.005.001.001.001.001.003.00-----------------------1.00----------------------------------------------------------------------------
...........................................................................GGGCGCGAGGGGCGGCG.............................................................................................................................................................. 1726.506.502.500.501.501.50-0.50----------------------------------------------------------------------------------------------------
...........................................................................CGCCGCCCCTCGCGCGCGG............................................................................................................................................................ 195.000.001.001.801.000.600.200.40----------------------------------------------------------------------------------------------------
.........................................................................CGCGCCGCCCCTCGCCG................................................................................................................................................................ 173.000.00--------------3.00-------------------------------------------------------------------------------------------
............................................................................GGGCGCGAGGGGCGGC.............................................................................................................................................................. 1632.672.671.670.33----------------------------------------------------------------------------------------------0.330.33--------
...........................................................................CGCCGCCCCTCGCGCCGCGG........................................................................................................................................................... 202.670.000.670.330.330.670.330.33----------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................GGGGAGAAGGGTGGGGCC............................ 182.000.00------------------------------------------------------------1.00--------------------1.00------------------------
..........................GAGCCCGAGGAGCCCCTGC............................................................................................................................................................................................................. 1912.002.00------------------------1.00------------------------1.00--------------------------------------------------------
...........................GAGCCCGAGGAGCCCCTG............................................................................................................................................................................................................. 1812.002.00------------------------------------------1.00-------------------------1.00-------------------------------------
...........................................................................CGCCGCCCCTCGCGCCCGCAG.......................................................................................................................................................... 211.000.00----1.00-----------------------------------------------------------------------------------------------------
...........................CACTGAGCCCGAGGAGCCCCTG......................................................................................................................................................................................................... 2211.001.00--------------------------------1.00-------------------------------------------------------------------------
........................................................................................................................................................................................................GCGCGGGGAGAAGGGTC................................. 171.000.00-----------1.00----------------------------------------------------------------------------------------------
.........................................................................................................................................................CGAAGTCCGCAGACAAAGCG............................................................................. 2011.001.00----------------------------------------1.00-----------------------------------------------------------------
...........................................................................CGCCGCCCCTCGCGCCCGCGT.......................................................................................................................................................... 211.000.00-1.00--------------------------------------------------------------------------------------------------------
............................ACTGAGCCCGAGGAGCCCCT.......................................................................................................................................................................................................... 2011.001.00------------------------------1.00---------------------------------------------------------------------------
....................................CTCGGGCTCAGTGGGTGAGTGCCT.............................................................................................................................................................................................. 241.000.00---------------------------------------------------------------------------1.00------------------------------
..............................................................................................................................CGCCCTCGGGGCGGAGAGGAGGGACCAGC............................................................................................... 2911.001.00------------------------1.00---------------------------------------------------------------------------------
.......ACCCCGGCCGCGCCCCCC................................................................................................................................................................................................................................. 181.000.00---------------------------------------------------------------1.00------------------------------------------
.GCGGCCGGGGTGGAGGG........................................................................................................................................................................................................................................ 1711.001.00-------------1.00--------------------------------------------------------------------------------------------
...................................................................................................................................................................................CCAGACGGGGCGCCA........................................................ 1511.001.00-------------------------------------------------------------------------------1.00--------------------------
.....................................................................................................GCATCTGGGGCTGCACACAA................................................................................................................................. 2011.001.00-------------------------------------------------------------------------------------1.00--------------------
........GCGCTTGGGCGCGGCCGGGG.............................................................................................................................................................................................................................. 2011.001.00---------------1.00------------------------------------------------------------------------------------------
.......................................................................................................GTGTGCAGCCCCAGAGCG................................................................................................................................. 181.000.00----------------------------------1.00-----------------------------------------------------------------------
.....CCACCCCGGCCGCGCCCGCGG................................................................................................................................................................................................................................ 211.000.00--------------------------------------------------------------------------------------------1.00-------------
................................................................................................................................................................................................................................AACAAACCCGGGCTCCAAGG...... 2011.001.00---------------------------------------------------------1.00------------------------------------------------
.............................................................................................................................................CCGCCCCGAGGGCGCGGC........................................................................................... 181.000.00-------------------------------------------------------------1.00--------------------------------------------
.................GCCCGAGGAGCCCCTGCGCTTGGGCG............................................................................................................................................................................................................... 2611.001.00----------------------------------------------------------1.00-----------------------------------------------
.............................................................................................................................CGGAGAGGAGGGACCAGCC.......................................................................................................... 1911.001.00------------------------1.00---------------------------------------------------------------------------------
...........................................................................CGCCGCCCCTCGCGCCCGCC........................................................................................................................................................... 201.000.00-1.00--------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................GCGCGGGGAGAAGGGTCCA............................... 191.000.00----------------------------------------------------------------------------------------------1.00-----------
............................................................CGGCGCGAAGCGAGAGGTCG.......................................................................................................................................................................... 2011.001.00--------------------------------------------------------------------------------------1.00-------------------
.................................CTCCTCGGGCTCAGTGGT....................................................................................................................................................................................................... 181.000.00-----------------------------------------1.00----------------------------------------------------------------
.................GCCCCTGCGCTTGGGCG........................................................................................................................................................................................................................ 1711.001.00-----------------------------------------------------------------------------1.00----------------------------
................................................................................................................................CGCCCTCGGGGCGGAGAGGAGGGACCA............................................................................................... 2711.001.00-----------------------1.00----------------------------------------------------------------------------------
.............................................................................................................................................CCGCCCCGAGGGCGCC............................................................................................. 161.000.00-----------1.00----------------------------------------------------------------------------------------------
........................................................................................................................................................................................................CCCACCCTTCTCCCCGCGC............................... 1911.001.00----------------1.00-----------------------------------------------------------------------------------------
............................................................................GGCGCGAGGGGCGGC............................................................................................................................................................... 1540.750.750.25-0.50-------------------------------------------------------------------------------------------------------
...........................................................................GGCGCGAGGGGCGGCG............................................................................................................................................................... 1630.670.670.67---------------------------------------------------------------------------------------------------------
...........................................................................GCGCGAGGGGCGGCG................................................................................................................................................................ 1550.600.60--0.60-------------------------------------------------------------------------------------------------------
..........................................................................................................AAAGCATCTGGGGCTGCA.............................................................................................................................. 1820.500.50--------------------------0.50-------------------------------------------------------------------------------
.............................................................................................................................................................................................................CCGCCCCACCCTTCTCCC........................... 1850.200.20-------------------------------------------------------------------------------------------------------0.20--
......................................................................................................................................CGGGGCGGAGAGGAG..................................................................................................... 1580.120.12---------------------------------------------------------------------------------------------------------0.12