ID: uc002rxu.2_intron_28_0_chr2_54883136_f.3p
GENE: (29)
chr2:54884787-54885036+


(1)
AGO2.ip 		(2)
BRAIN 		(4)
BREAST 		(20)
CELL-LINE 		(4)
CERVIX 		(1)
FIBROBLAST 		(4)
HEART 		(3)
LIVER 		(2)
OTHER 		(12)
SKIN

Sense strand
TTTTAATGTGGCTACTGGAAAAGTCAAAGTTGCAAGTGTGGCTCACATTACATTTACATTGGACAGGGCTAATTTAGAGTAGACGATAGACTGGTTATGCAGGTAGCCATCACCAGAGGGCAGCAGTGCCAAGAGGTAAGGCCATATGACTGCCCGGCACCTCCTGGTCAACGTGTACTAACTCATGGTACCCTGTGCAGTTCTGGAGGTCCATCAGTTCTCAAGAGACGCCAGTGTGGCCGAGGCCTGG
............................................................(((..((((.....................(((((.((((.....)).)).))))).((((((((..(((.........)))....)).)))))).)).)))))......................................................................................
..................................................51.................................................................................................................166..................................................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189784SRR037943(GSM510481)
293DcrTN. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040008(GSM532893)
G727N. (cervix)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR343334SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040029(GSM532914)
G026T. (cervix)		SRR444065(SRX128913)
Sample 22cDNABarcode: AF-PP-335: ACG CTC TTC . (cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR189782SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR029127(GSM416756)
A549. (cell line)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040006(GSM532891)
G601N. (cervix)		SRR029126(GSM416755)
143B. (cell line)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		TAX577579(Rovira)
total RNA. (breast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
........................................................CATTGGACAGGGCTATGA................................................................................................................................................................................18124.000.0068.008.004.005.006.005.004.003.00-3.00-2.00--1.00---2.00------1.00---1.00--1.00--1.00-1.00-1.00---1.001.001.00---1.001.001.00-1.00-
........................................................CATTGGACAGGGCTATGAT...............................................................................................................................................................................1922.000.0013.002.004.001.002.00--------------------------------------------------
........................................................CATTGGACAGGGCTATGT................................................................................................................................................................................1814.000.008.00-1.001.00---1.00---1.00--2.00----------------------------------------
........................................................CATTGGACAGGGCTATG.................................................................................................................................................................................1710.000.008.00-----------------------------1.00---1.00--------------------
...................................................................................................................................................................................................................................ACGCCAGTGTGGCCGAGGCCT..2113.003.00------------3.00------------------------------------------
........................................................CATTGGACAGGGCTATCA................................................................................................................................................................................183.000.002.00----1.00-------------------------------------------------
........................................................CATTGGACAGGGCTAGGA................................................................................................................................................................................182.000.00------1.00----1.00-------------------------------------------
........................................................CATTGGACAGGGCTATGAA...............................................................................................................................................................................192.000.00---1.00--------------------------------------------1.00------
..............................................................................................................................................................................................................AGGTCCATCAGTTCTCAAGAGAC.....................2312.002.00-------------2.00-----------------------------------------
........................................................CATTGGACAGGGCTAT..................................................................................................................................................................................162.000.002.00------------------------------------------------------
.....................................................................................................................................................CTGCCCGGCACCTCCACCA..................................................................................192.000.00----------------------------1.00------------1.00-------------
..........................................................................................................................................................................ACGTGTACTAACTCATG...............................................................1721.501.50--------------------1.50----------------------------------
........................................................................................................................................................................................................................GTTCTCAAGAGACGCCAGTGTGGCC.........2511.001.00----------------1.00--------------------------------------
...........................................................................AGAGTAGACGATAGACTG.............................................................................................................................................................1811.001.00------------------------------------------1.00------------
........................................................................................................................................................................................................................GTTCTCAAGAGACGCC..................1611.001.00---------------1.00---------------------------------------
....................................................................CTAATTTAGAGTAGACGATAGACTGG............................................................................................................................................................2611.001.00----------------------------------------------------1.00--
...............................................................................................................................................................................................................................AGAGACGCCAGTGTGGCCGAGGCC...2411.001.00----------1.00--------------------------------------------
.........................................CTCACATTACATTTACAATAG............................................................................................................................................................................................211.000.00---------------------1.00---------------------------------
........................................................CATTGGACAGGGCTATGAC...............................................................................................................................................................................191.000.00---------1.00---------------------------------------------
.........................................................ATTGGACAGGGCTAAT.................................................................................................................................................................................1611.001.00------------------------------------1.00------------------
............................................................................................................................................................................................................GGAGGTCCATCAGTTCTCAAG.........................2111.001.00----------1.00--------------------------------------------
.................................................................................................................................................................................................................................AGACGCCAGTGTGGCCGAGGCCT..2311.001.00-------------------1.00-----------------------------------
........................................................CATTGGACAGGGCTATGAG...............................................................................................................................................................................191.000.00-1.00-----------------------------------------------------
............................................................................................................................................................................................................................TCAAGAGACGCCAGTGTGGCCGAGGCCT..2811.001.00-------------------1.00-----------------------------------
.......................................................ACATTGGACAGGGCTATGAT...............................................................................................................................................................................201.000.00-----1.00-------------------------------------------------
..........................................................................TAGAGTAGACGATAGACT..............................................................................................................................................................1811.001.00-----------------------------------------------1.00-------
...........................................................................................................................................................................................................TGGAGGTCCATCAGTTCTCAAGAGACGCCA.................3011.001.00-------------------------------1.00-----------------------
....................................................................................................................................................................................................................ATCAGTTCTCAAGAGACGCC..................2011.001.00---------------------------1.00---------------------------
......................................................................................................................................................................................................AGTTCTGGAGGTCCATCAG.................................1911.001.00----------------1.00--------------------------------------
.....................................................................................................................................................................................................................................GCCAGTGTGGCCGAGTGG...181.000.00--------1.00----------------------------------------------
........................................................................................................................................................................................................................GTTCTCAAGAGACGCCAGT...............1911.001.00-----------------------1.00-------------------------------
..................................................CATTTACATTGGACAGGGCTAATA................................................................................................................................................................................241.000.00-----------------1.00-------------------------------------
..........................................................................................................................................................................................................CTGGAGGTCCATCAGTTCTCAAGAGACGCCA.................3111.001.00-----------------1.00-------------------------------------
................................................................................................................................................................................................................GTCCATCAGTTCTCAAGAGACG....................2211.001.00--------------------------1.00----------------------------
............................................................................................................................................................................................................GGAGGTCCATCAGTTCTCAAGAGACGCCA.................2911.001.00----------1.00--------------------------------------------
......................................................................AATTTAGAGTAGACGATAGACT..............................................................................................................................................................2211.001.00----------------------1.00--------------------------------
..........................................................TTGGACAGGGCTAATTTAGAGTAGA.......................................................................................................................................................................2511.001.00---------------------------------1.00---------------------
......................................................................................................................................................TGCCCGGCACCTCCTCCA..................................................................................181.000.00----------------------------------------------1.00--------
.......................................................................................................................................................................................................................AGTTCTCAAGAGACGCCAG................1911.001.00---------------1.00---------------------------------------
........................................................CATTGGACAGGGCTATC.................................................................................................................................................................................171.000.001.00------------------------------------------------------
............................................................................................................................................................................................................GGAGGTCCATCAGTTCTC............................1811.001.00----------1.00--------------------------------------------
........................................................CATTGGACAGGGCTATAT................................................................................................................................................................................181.000.00--1.00----------------------------------------------------
..........................................................................................................................................................................................................................TCTCAAGAGACGCCAGTGTGGC..........2211.001.00-------------1.00-----------------------------------------
.................................................................................................................................................................................CTAACTCATGGTACCCTGTGCAGTT................................................2511.001.00----------------------------------------1.00--------------
............................................................................................................................................................................................................GGAGGTCCATCAGTTCTCAAGAGACGC...................2711.001.00------------------------1.00------------------------------
..........................................................................................................................................................................................................................TCTCAAGAGACGCCAGT...............1720.500.50---------------0.50---------------------------------------
..........................................................................................................................................................................................................................TCTCAAGAGACGCCAG................1620.500.50---------------0.50---------------------------------------
.........................................................................................................................................................................................TGGTACCCTGTGCAG..................................................1580.120.12------------------------------------------------------0.12

Antisense strand
TTTTAATGTGGCTACTGGAAAAGTCAAAGTTGCAAGTGTGGCTCACATTACATTTACATTGGACAGGGCTAATTTAGAGTAGACGATAGACTGGTTATGCAGGTAGCCATCACCAGAGGGCAGCAGTGCCAAGAGGTAAGGCCATATGACTGCCCGGCACCTCCTGGTCAACGTGTACTAACTCATGGTACCCTGTGCAGTTCTGGAGGTCCATCAGTTCTCAAGAGACGCCAGTGTGGCCGAGGCCTGG
............................................................(((..((((.....................(((((.((((.....)).)).))))).((((((((..(((.........)))....)).)))))).)).)))))......................................................................................
..................................................51.................................................................................................................166..................................................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189784SRR037943(GSM510481)
293DcrTN. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040008(GSM532893)
G727N. (cervix)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR343334SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040029(GSM532914)
G026T. (cervix)		SRR444065(SRX128913)
Sample 22cDNABarcode: AF-PP-335: ACG CTC TTC . (cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR189782SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR029127(GSM416756)
A549. (cell line)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040006(GSM532891)
G601N. (cervix)		SRR029126(GSM416755)
143B. (cell line)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		TAX577579(Rovira)
total RNA. (breast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
.......................................................................................................................................................GCCCGGCACCTCCTGGCACG............................................................................... 201.000.00--------1.00----------------------------------------------
..............................................................................................................................................................................................CCCTGTGCAGTTCTGCCTC......................................... 191.000.00--------1.00----------------------------------------------
...........................................................................................................................................................TTGACCAGGAGGTGCC............................................................................... 1611.001.00--------------------------------------1.00----------------
.......................TCAAAGTTGCAAGTGACCG................................................................................................................................................................................................................ 191.000.00--------1.00----------------------------------------------