ID: uc002rsi.2_intron_4_0_chr2_42490447_f.5p
GENE: (5)
chr2:42490397-42490646+


(1)
BRAIN 		(2)
BREAST 		(18)
CELL-LINE 		(2)
HEART 		(1)
HELA 		(3)
LIVER 		(1)
OTHER 		(4)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
ATACCTTCAACACCCAAATTAATACCAAAAGTTACCAAAACTGCAGACAAGTAAGTATTGCACTTTCTTCATTATATCTGAAAAGTAATAATTATTTGGCTATTATGTTTGCATGTACAGTTATGTATGTCTGGTTTGAATCTTTTTTTTTTTTTTTTTTTTTTTTTGTGACAGAGTCTTGCTCTGTCGCCAGGCTGGAGTGCAGTGGCACCATCTTGGCTCACTGCAGCCTCTGCCTCCCAGGTTCAAG
..................................................((((.((((((..((((............)))).)))))).))))..(((((.......((((((......))))))....)))))..................................................................................................................
..................................................51................................................................................................................165...................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR343336SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTCTCG....................................................................................2821.000.00--11.008.00-2.00-------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTCTCG..................................................................................3015.000.00--5.004.003.003.00-------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTCCCG....................................................................................287.000.00--4.001.001.001.00-------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTCCCG..................................................................................306.000.00--2.004.00---------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTTTTCG.................................................................................315.000.00--2.001.001.001.00-------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTCTCG..................................................................................294.000.001.00-2.001.00---------------------------------
............................................................................................................................................TCTTTTTTTTTTTTTTTTTTTTTTTTTGTGGTTG............................................................................344.000.00--2.002.00---------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTCTCT..................................................................................303.000.00--1.001.001.00--------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTCTAG....................................................................................273.000.00----1.002.00-------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTCGGT....................................................................................283.000.003.00------------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTCAAG..................................................................................293.000.001.00--1.00-1.00-------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTCTTG....................................................................................283.000.00---1.001.001.00-------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTATAG....................................................................................283.000.00--1.001.00--1.00------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTTTTCAT................................................................................313.000.00--1.001.00-1.00-------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTTTTCTT................................................................................323.000.00--2.00--1.00-------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTCCC...................................................................................293.000.00-1.002.00----------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTATTT....................................................................................283.000.00--1.001.00--1.00------------------------------
..................................CCAAAACTGCAGACAAG.......................................................................................................................................................................................................1713.003.00-------3.00-----------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTCCCC....................................................................................282.000.00--2.00----------------------------------
..............................................................................................................................................................................................................................ACTGCAGCCTCTGCCTCCCAGGTCCGG.2702.001.002.00------------------------------------
............................................................................................................................................TCTTTTTTTTTTTTTTTTTTTTTTTTTGTGGTT.............................................................................332.000.00-1.00-1.00---------------------------------
...............................TTACCAAAACTGCAGACAAG.......................................................................................................................................................................................................2012.002.00-----------2.00-------------------------
........................................................................................................................................TGAATCTTTTTTTTTTTTTTTTTAG.........................................................................................252.000.00---2.00---------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTTTTATT................................................................................322.000.00-----1.001.00------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTAAAT......................................................................................262.000.00-----2.00-------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTACG.......................................................................................242.000.00---1.00-1.00-------------------------------
..............................GTTACCAAAACTGCAGACA.........................................................................................................................................................................................................1912.002.00----------2.00--------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTACTG......................................................................................262.000.00----2.00--------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTTTAATT................................................................................322.000.00--2.00----------------------------------
.....................................................AGTATTGCACTTTCTTTTT..................................................................................................................................................................................192.000.002.00------------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTATTG....................................................................................282.000.00---2.00---------------------------------
.....................................................................................................................................................................................................................TCTTGGCTCACTGCAGCCTCTGCCTCCGTG.......302.000.002.00------------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTATG...................................................................................292.000.00---2.00---------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTTTTATTG...............................................................................332.000.00--1.001.00---------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTCGG.....................................................................................272.000.002.00------------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTTTTCCCG...............................................................................332.000.00---2.00---------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTTTTCCAT...............................................................................322.000.00---1.00-1.00-------------------------------
.......................................................................................................................................................................................................................TTGGCTCACTGCAGCCTCTGCCTGGGT........272.000.002.00------------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTATGG....................................................................................282.000.002.00------------------------------------
............................................................................................................................................TCTTTTTTTTTTTTTTTTTTTTTTTTTGTCCG..............................................................................321.000.00------1.00------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTCTAG....................................................................................281.000.00----1.00--------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTTTACGG................................................................................311.000.001.00------------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTCATG..................................................................................301.000.00--1.00----------------------------------
.........................................................................................................................................GAATCTTTTTTTTTTTTTTTTTTTTTTATTT..................................................................................311.000.00---1.00---------------------------------
............................................................................................................................................TCTTTTTTTTTTTTTTTTTTTTTTTTTGTGAGC.............................................................................331.000.00-1.00-----------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTTTTAAAA...............................................................................331.000.00----1.00--------------------------------
............................................................................................................................................TCTTTTTTTTTTTTTTTTTTTTTTTTTGTCTTG.............................................................................331.000.00------1.00------------------------------
...........................................................................................................................................................................................................................CTCACTGCAGCCTCTGCCCAGG.........221.000.00-1.00-----------------------------------
...............................................................................................................................................................................................AGGCTGGAGTGCAGTGGCACCTTGC..................................251.000.001.00------------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTAACG....................................................................................281.000.001.00------------------------------------
..............................................................................................................................................................................................................................ACTGCAGCCTCTGCCTCCCAGGGTCC..261.000.001.00------------------------------------
..............................................................................................................................................................................................................................ACTGCAGCCTCTGCCTCCCAGCTC....241.000.00-1.00-----------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTCTGC....................................................................................271.000.001.00------------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTTTTCCC................................................................................311.000.001.00------------------------------------
................................................................................................................................................................................................................................TGCAGCCTCTGCCTCCCAGCG.....211.000.00-1.00-----------------------------------
.........................................................................................................................................GAATCTTTTTTTTTTTTTTTTTTTTTAAG....................................................................................291.000.00---1.00---------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTCAAA....................................................................................271.000.00----1.00--------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTCGC...................................................................................281.000.001.00------------------------------------
..................................................................................................................................................................................TTGCTCTGTCGCCAGGCTGGAGTGCAGGGCG.........................................311.000.001.00------------------------------------
.....................................................................................................................................................................................CTCTGTCGCCAGGCTGGAGTGCTCTG...........................................261.000.00-----------------------------------1.00-
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTCCGG..................................................................................301.000.001.00------------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTTTTCGGG...............................................................................321.000.001.00------------------------------------
...........................................................................................................................................................................................................................CTCACTGCAGCCTCTGCCTCCCAGGGAC...281.000.001.00------------------------------------
........................................................................................................................................TGAATCTTTTTTTTTTTTTTTTTTTTTTC.....................................................................................291.000.00-1.00-----------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTCAAG....................................................................................281.000.00------1.00------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTCTAT....................................................................................271.000.00----1.00--------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTTTTCTC................................................................................321.000.00----1.00--------------------------------
..............................................................................................................................................................................AGTCTTGCTCTGTCGCCAGGCAA.....................................................231.000.00---------------------------------1.00---
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTTTTGTGGG..............................................................................331.000.001.00------------------------------------
..........................................................................................................................................................TTTTTTTTTTTTTGTGACAGCGTA........................................................................241.000.00-1.00-----------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTTTACTG................................................................................321.000.001.00------------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTTTTACG................................................................................321.000.00--1.00----------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTTTATA.................................................................................301.000.00-1.00-----------------------------------
................................TACCAAAACTGCAGACA.........................................................................................................................................................................................................1711.001.00-------------------------------1.00-----
.......................................................TATTGCACTTTCTTCGCC.................................................................................................................................................................................181.000.00----------------------------1.00--------
...........................................................................................................................................................................................................................CTCACTGCAGCCTCTGCCTCCCAGGGCC...281.000.001.00------------------------------------
.............................................................................................................................................................................................................TGGCACCATCTTGGCTCCGC.........................201.000.00-1.00-----------------------------------
..................................................................................................................................................TTTTTTTTTTTTTTTTTTTTTGTGAACC............................................................................281.000.00---1.00---------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTAGGG......................................................................................251.000.001.00------------------------------------
........................................................................................................................................TGAATCTTTTTTTTTTTTTTTTTTTTTTTTTC..................................................................................321.000.00----1.00--------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTTTTCAT................................................................................321.000.00----1.00--------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTTTTGTTGT..............................................................................341.000.00--1.00----------------------------------
................................................................................................................................................................................TCTTGCTCTGTCGCCAGGCCGGC...................................................231.000.00-1.00-----------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTTTACA.................................................................................311.000.00----1.00--------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTACTG..................................................................................301.000.00----1.00--------------------------------
...............................................................................................................................................................................................................GCACCATCTTGGCTCACTCCTG.....................221.000.001.00------------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTCGCG..................................................................................291.000.00-----1.00-------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTTTACAG................................................................................311.000.00--1.00----------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTATA.....................................................................................271.000.00-----1.00-------------------------------
...............................TTACCAAAACTGCAGACAA........................................................................................................................................................................................................1911.001.00------------------------------1.00------
.....................................................................................................................................................................................................................TCTTGGCTCACTGCAGCCTCTGAAA............251.000.00------------1.00------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTCCCG....................................................................................271.000.00--1.00----------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTCCCG..................................................................................291.000.00--1.00----------------------------------
...........................................................................................................................................................................................CGCCAGGCTGGAGTGCAGTGTGGG.......................................241.000.00--------------------------------1.00----
..........................................................................................................................................................................................................................GCTCACTGCAGCCTCTGCCCTGG.........231.000.00-1.00-----------------------------------
........................................................................................................................................................................................................................TGGCTCACTGCAGCCTCTGCCTCCCCGGG.....291.000.00-1.00-----------------------------------
.........................................................................................................................................GAATCTTTTTTTTTTTTTTTTTTTCCCG.....................................................................................281.000.00---1.00---------------------------------
....................................................................................................................................................................................................................ATCTTGGCTCACTGCAGCCTCTGCCATCC.........291.000.001.00------------------------------------
........................................................................................................................................................TTTTTTTTTTTTTTTGTGACATTT..........................................................................241.000.00------1.00------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTATAG......................................................................................261.000.00----1.00--------------------------------
..............................................................................................................................................................................................................................ACTGCAGCCTCTGCCTCGGGG.......211.000.00-1.00-----------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTTTTCATG...............................................................................321.000.00----1.00--------------------------------
........................................................................................................................................................................................TGTCGCCAGGCTGGAGTGCAGGCAG.........................................251.000.001.00------------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTCTCA....................................................................................281.000.00---1.00---------------------------------
..........................................................................................................................................................................................................................GCTCACTGCAGCCTCTGCCTCGGGT.......251.000.00-1.00-----------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTTTATC.................................................................................301.000.001.00------------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTTTAGT.................................................................................311.000.00---1.00---------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTTTTCTCC...............................................................................331.000.00--1.00----------------------------------
...................................................................................................................................................TTTTTTTTTTTTTTTTTTTTGTGACAAAA..........................................................................291.000.00--1.00----------------------------------
............................................................................................................................................................................................................................TCACTGCAGCCTCTGCCTCCCTTTT.....251.000.00-----------------------1.00-------------
..............CAAATTAATACCAAAAGTTACC......................................................................................................................................................................................................................2211.001.00----------------1.00--------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTTTTGTTTAG.............................................................................351.000.00----1.00--------------------------------
.......................................................................................................................................................................................................................TTGGCTCACTGCAGCCTCTGCCTAGGG........271.000.001.00------------------------------------
............CCCAAATTAATACCAAAAGTTACCAAAACTGC..............................................................................................................................................................................................................3211.001.00------------1.00------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTCTCT....................................................................................281.000.00--1.00----------------------------------
..............................................................................................................................................................................................................................ACTGCAGCCTCTGCCTCCCAGGT.....2301.001.00-------------1.00-----------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTTTTCCCG...............................................................................321.000.00--1.00----------------------------------
....................................................................................................................................................TTTTTTTTTTTTTTTTTTTGTGAAGGG...........................................................................271.000.00-1.00-----------------------------------
....................................................................................................................................................................................................................ATCTTGGCTCACTGCAGCCTCTGCCTTGGG........301.000.001.00------------------------------------
.............................................................................................................................................CTTTTTTTTTTTTTTTTTTTTTTTTTGTGTTTT............................................................................331.000.00---1.00---------------------------------
........................................................................................................................................TGAATCTTTTTTTTTTTTTTTTTTTTTAT.....................................................................................291.000.00---1.00---------------------------------
..................................................................................................................................................TTTTTTTTTTTTTTTTTTTTTGTGACCGG...........................................................................291.000.001.00------------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTTTTGCG................................................................................311.000.001.00------------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTTTTCATG...............................................................................331.000.00--1.00----------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTCCCT..................................................................................301.000.00----1.00--------------------------------
........................................................................................................................................................................................................................TGGCTCACTGCAGCCTCTGCCTCAGGC.......271.000.001.00------------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTCAAC....................................................................................271.000.00---1.00---------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTTTTATGT...............................................................................331.000.00---1.00---------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTTTACG.................................................................................301.000.00--1.00----------------------------------
............................................................................................................................................................................................................................TCACTGCAGCCTCTGCCCGT..........201.000.00-------------------------1.00-----------
............................................................................................................................................TCTTTTTTTTTTTTTTTTTTTTTTTTTGTCGG..............................................................................321.000.00-----1.00-------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTCGGG..................................................................................291.000.001.00------------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTCAGT....................................................................................281.000.001.00------------------------------------
............................................................................................................................................................................................................GTGGCACCATCTTGGAC.............................171.000.00-----------------1.00-------------------
....................................................................................................................................................................................GCTCTGTCGCCAGGCTGGAGTGCAGAA...........................................271.000.00---------------------------1.00---------
.................................ACCAAAACTGCAGACAAGCAT....................................................................................................................................................................................................2111.001.00--------------1.00----------------------
....................................................................................................................................................................................................................ATCTTGGCTCACTGCAGCCTCTGCCTCCGGCG......321.000.00-1.00-----------------------------------
.................................ACCAAAACTGCAGACAAGGTAG...................................................................................................................................................................................................2211.001.00----------------------------------1.00--
........AACACCCAAATTAATACCAAAAGA..........................................................................................................................................................................................................................241.000.00--------------------1.00----------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTCGGT..................................................................................301.000.001.00------------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTCGAG..................................................................................301.000.001.00------------------------------------
...............................................................................................................................................................................................AGGCTGGAGTGCAGTGGCACCTCTG..................................251.000.001.00------------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTATGG......................................................................................261.000.001.00------------------------------------
......................................................................................................................................................................................TCTGTCGCCAGGCTGGAGTGCAGGTGC.........................................271.000.001.00------------------------------------
.................................ACCAAAACTGCAGACAAG.......................................................................................................................................................................................................1811.001.00-------------------1.00-----------------
.............................................................................................................................................CTTTTTTTTTTTTTTTTTTTTTTTTTGTGGGAG............................................................................331.000.00---1.00---------------------------------
....................................................................................................................................................................................................................ATCTTGGCTCACTGCAGCCTCTGCCTCGGG........301.000.00-1.00-----------------------------------
.......................................................................................................................................TTGAATCTTTTTTTTTTTTTTTTTTTGAT......................................................................................291.000.00-1.00-----------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTTTTGTACC..............................................................................331.000.00-----1.00-------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTTTTCGT................................................................................311.000.00-----1.00-------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTTTTGTC................................................................................311.000.001.00------------------------------------
............................................................................................................................................TCTTTTTTTTTTTTTTTTTTTTTTTTTGTACTA.............................................................................331.000.00---1.00---------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTTTTGCGT...............................................................................321.000.00--1.00----------------------------------
..........................................................................................................................................................................................................................GCTCACTGCAGCCTCTGCCTCAAA........241.000.00----------------------1.00--------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTTTAGGG................................................................................311.000.001.00------------------------------------
.......................................................................................................................GTTATGTATGTCTGGTTTG................................................................................................................1911.001.00-----------------------------1.00-------
..........................................................................................................................................................................ACAGAGTCTTGCTCTGTCGCCAGGCTAGGG..................................................301.000.00-1.00-----------------------------------
..................................................................................................................................................................................TTGCTCTGTCGCCAGGCTGGAGTGCAGGGC..........................................301.000.001.00------------------------------------
...................................................................................................................................................................TTTTGTGACAGAGTCTTGCTCCACT..............................................................251.000.001.00------------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTCGTC....................................................................................271.000.00-1.00-----------------------------------
...................................................................................................................................................................................TGCTCTGTCGCCAGGCTGGAGTGCAGTGGCCG.......................................321.000.001.00------------------------------------
.............................................................................................................................................CTTTTTTTTTTTTTTTTTTTTTTTTTGTGTTTG............................................................................331.000.00---1.00---------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTCTCC..................................................................................291.000.00--1.00----------------------------------
...................................................................................................................................................................................TGCTCTGTCGCCAGGCTGGAGTGCAGTGTG.........................................301.000.001.00------------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTTTATCT................................................................................321.000.00----1.00--------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTCTCC..................................................................................301.000.001.00------------------------------------
...........................................................................................................................................ATCTTTTTTTTTTTTTTTTTTTTTTTTTCTTG...............................................................................321.000.00--1.00----------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTTTTCTCG...............................................................................331.000.00----1.00--------------------------------
.................................ACCAAAACTGCAGACAA........................................................................................................................................................................................................1730.330.33------------------------------------0.33
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTTTTGTG................................................................................3230.330.33-0.33-----------------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTTTTGTGTT..............................................................................3430.330.33--0.33----------------------------------
........................................................................................................................................TGAATCTTTTTTTTTTTTTTTTTTTTTTTTTG..................................................................................3260.170.17---0.17---------------------------------
..................................CCAAAACTGCAGACAA........................................................................................................................................................................................................1670.140.14-------------0.14-----------------------

Antisense strand
ATACCTTCAACACCCAAATTAATACCAAAAGTTACCAAAACTGCAGACAAGTAAGTATTGCACTTTCTTCATTATATCTGAAAAGTAATAATTATTTGGCTATTATGTTTGCATGTACAGTTATGTATGTCTGGTTTGAATCTTTTTTTTTTTTTTTTTTTTTTTTTGTGACAGAGTCTTGCTCTGTCGCCAGGCTGGAGTGCAGTGGCACCATCTTGGCTCACTGCAGCCTCTGCCTCCCAGGTTCAAG
..................................................((((.((((((..((((............)))).)))))).))))..(((((.......((((((......))))))....)))))..................................................................................................................
..................................................51................................................................................................................165...................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR343336SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
................................................................................................................................................................................................GGCTGGAGTGCAGTGGCACCATGGC................................. 254.000.003.001.00-----------------------------------
................................................................................................................................................................................................GGCTGGAGTGCAGTGGCACCATGAGC................................ 264.000.001.003.00-----------------------------------
............................................................................................................................................................................................GCCAGGCTGGAGTGCAGTGGCACCATTAGC................................ 303.000.003.00------------------------------------
................................................................................................................................................................................................GGCTGGAGTGCAGTGGCACCATGGAC................................ 263.000.00-3.00-----------------------------------
................................................................................................................................................................................................GGCTGGAGTGCAGTGGCACCATGGCG................................ 263.000.003.00------------------------------------
................................................................................................................................................................................................GGCTGGAGTGCAGTGGCACCATGGTG................................ 262.000.001.001.00-----------------------------------
...............................................................................................................................................................................................................................CTGCAGCCTCTGCCTCCCAGAA..... 221.000.00------------------------1.00------------
..............................................................................................................................................................................AGTCTTGCTCTGTCGCCAGGCTGGT................................................... 251.000.00---------1.00---------------------------
................................................................................................................................................................................................GGCTGGAGTGCAGTGGCACCATCGGC................................ 261.000.001.00------------------------------------
.................................................................................................................................................................................................................................GCAGCCTCTGCCTCCCAGGTGGC.. 231.000.001.00------------------------------------
.................................................................................................................................................................................................................................GCAGCCTCTGCCTCCCAGGTTCAGCGG 271.000.001.00------------------------------------
.................................................................................................................................................................................................................................GCAGCCTCTGCCTCCCAGGAG.... 211.000.00-1.00-----------------------------------
..................................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTTCAAGCG 261.000.00-1.00-----------------------------------
.................................................................................................................................................................................................................................GCAGCCTCTGCCTCCCAGGTTCAACAAG 281.000.00-1.00-----------------------------------
......................................................................................................................................................................................TCTGTCGCCAGGCTGGAGTGCAGTCGGC........................................ 281.000.001.00------------------------------------
.................................................................................................................................................................................................................................GCAGCCTCTGCCTCCCAGGTTGGCG 251.000.00-1.00-----------------------------------
..................................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTTGGC. 231.000.00-1.00-----------------------------------
...............................................................................................................................................................................................................................CTGCAGCCTCTGCCTCCCAGGTTCACGC 281.000.001.00------------------------------------
..................................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTTTTCC 241.000.00-1.00-----------------------------------
....................................................................................................................................................................................GCTCTGTCGCCAGGCTGGAGTGCAGTGGTAT....................................... 311.000.001.00------------------------------------
..................................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTGCGG. 231.000.00-1.00-----------------------------------
........................................................................................................................................................................................TGTCGCCAGGCTGGAGTGCAGTTG.......................................... 241.000.00--------1.00----------------------------
..............................................................................................................................................................................................................................ACTGCAGCCTCTGCCTCCCAGGTTCAAGCC 301.000.001.00------------------------------------
..................................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTTGAGC 241.000.00-1.00-----------------------------------
.........................................................................................................................................................................................................GCAGTGGCACCATCTTGGCTCACTCAC...................... 271.000.00--------1.00----------------------------
..........................................................................................................................................AATCTTTTTTTTTTTTTTTTTTTTTTTTTGGCCT.............................................................................. 341.000.00--------------------------1.00----------
...........................................................................................................................................................................................................................CTCACTGCAGCCTCTGCCTCCCAGGTGTC.. 291.000.00-1.00-----------------------------------
.................................................................................................................................................................................CTTGCTCTGTCGCCAGGCTGGAGTGCAGTGCCC........................................ 331.000.001.00------------------------------------
...........................................................................................................................................................................CAGAGTCTTGCTCTGTCGCCAGCTC...................................................... 251.000.001.00------------------------------------
...........................................................................................................................................................................................................................CTCACTGCAGCCTCTGCCTCCCAGGTTGTC. 301.000.00-1.00-----------------------------------
.................................................................................................................................................................................................................................GCAGCCTCTGCCTCCCAGGTGAG.. 231.000.00-1.00-----------------------------------
.................................................................................................................................................................................................................................GCAGCCTCTGCCTCCCAGGTTGAGT 251.000.00-1.00-----------------------------------
............................................................................................................................................................................................................................TCACTGCAGCCTCTGCCTCCCAGGTTCACTG 311.000.001.00------------------------------------
.............................................................................................................................................................................................................................CACTGCAGCCTCTGCCTCCCAGGTTCCGCT 301.000.001.00------------------------------------
................................................................................................................................................................................................................................TGCAGCCTCTGCCTCCCAGGTTCAAAAG 281.000.001.00------------------------------------
..............................................................................................................................................................................................................................ACTGCAGCCTCTGCCTCCCAGGTAGCC. 2701.000.001.00------------------------------------
.......................................................................................................................................................................................................................TTGGCTCACTGCAGCCTCTGACC............ 231.000.00-1.00-----------------------------------
..........................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAGATT................................................................................... 2901.001.00---------------1.00---------------------
................................................................................................................................................................................................GGCTGGAGTGCAGTGGCACCATGGGT................................ 261.000.00-1.00-----------------------------------
.................................................................................................................................................................................................................................GCAGCCTCTGCCTCCCAGGTTCAGGCG 271.000.00-1.00-----------------------------------
..................................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTTCAGAGC 261.000.00-1.00-----------------------------------
..................................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTTCAGAGG 261.000.00-1.00-----------------------------------
..................................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTGC... 211.000.00-1.00-----------------------------------
..................................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTTCAAGAA 261.000.00-1.00-----------------------------------
..................................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTTCAGC 241.000.00-1.00-----------------------------------
...............................................................................................................................................................................................................................GAACCTGGGAGGCAGAGGCTGCAG... 2401.001.00------------------1.00------------------
..................................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTTGAGG 241.000.00-1.00-----------------------------------
..............................................................................................................................................................................................................................ACTGCAGCCTCTGCCTCGC......... 191.000.00---------------------1.00---------------
............................................................................................................................................................................AGAGTCTTGCTCTGTCGCCAGGCTCCC................................................... 271.000.001.00------------------------------------
.............................................................................................................................................................................................................................CACTGCAGCCTCTGCCTCCCAGGTTGGGC 291.000.00-1.00-----------------------------------
..................................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTTCAAGC 251.000.00-1.00-----------------------------------
...........................................................................................................................................................................................................................GAACCTGGGAGGCAGAGGCTGCAGTGAG... 2801.001.00---------1.00---------------------------
...........................................................................................................................................................................................................................CTCACTGCAGCCTCTGCCTCCCAGGG..... 261.000.00-1.00-----------------------------------
...............................................................................................................................................................................................................................CTGCAGCCTCTGCCTCCCAGGTTGGCG 271.000.001.00------------------------------------
....................................................................................................................................................................................................................................GCCTCTGCCTCCCAGGTTCACACC 241.000.001.00------------------------------------
..................................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTGAGG. 231.000.00-1.00-----------------------------------
.............................................................................................................................................................................................................................CACTGCAGCCTCTGCCTCCCAGGTTCACC 291.000.00-1.00-----------------------------------
................................................................................................................................................................................................GGCTGGAGTGCAGTGGCACCATGAC................................. 251.000.00-1.00-----------------------------------
..................................................................................................................................................................................................................................CAGCCTCTGCCTCCCAGGTGCTC. 231.000.00-1.00-----------------------------------