| (1) AGO2.ip | (2) BRAIN | (7) BREAST | (9) CELL-LINE | (2) CERVIX | (1) FIBROBLAST | (3) HEART | (1) HELA | (2) LIVER | (1) OTHER | (3) SKIN | (1) UTERUS | (1) XRN.ip |
| GGAGAATATTTAATGTAGGAAAGAATGGCTCATTTCTTACAGAACTTTTCATTAACTTGAAAATTCTCACGGTTTATGTTTAATACAATATAGATTTTTAATTATTAGAGTGCCTTAAGTGTTAAGTGTTTTTTATTTTGATTAAAAGGTAACAAAAAAAATTTTTAATGATGTTCTTTTAAAAATTTTTTTTGTAACAGACCGATGTAAAGGAAAAACAGAAAAAACTTGTTGAACAATTAACTGGATT ....................................................................................................................................................((.(((((((((((((((((..........))))))))))))))))).)).................................................... .................................................................................................................................................146...................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189782 | SRR037935(GSM510473) 293cand3. (cell line) | SRR363675(GSM830252) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast) | GSM450602(GSM450602) miRNA sequencing raw reads from post-mortem s. (brain) | SRR189784 | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | SRR029124(GSM416753) HeLa. (hela) | SRR094130(GSM651906) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR191631(GSM715741) 75genomic small RNA (size selected RNA from t. (breast) | SRR037938(GSM510476) 293Red. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR330893(SRX091731) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR191614(GSM715724) 92genomic small RNA (size selected RNA from t. (breast) | SRR330880(SRX091718) tissue: skin psoriatic involveddisease state:. (skin) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR040019(GSM532904) G701T. (cervix) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR191557(GSM715667) 57genomic small RNA (size selected RNA from t. (breast) | SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line) | SRR040025(GSM532910) G613T. (cervix) | SRR029126(GSM416755) 143B. (cell line) | SRR191624(GSM715734) 31genomic small RNA (size selected RNA from t. (breast) | TAX577579(Rovira) total RNA. (breast) | SRR189786 | SRR191591(GSM715701) 53genomic small RNA (size selected RNA from t. (breast) | SRR029131(GSM416760) MCF7. (cell line) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330866(SRX091704) tissue: skin psoriatic involveddisease state:. (skin) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR191394(GSM715504) 23genomic small RNA (size selected RNA from t. (breast) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR343335 | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................AAAAATTTTTTTTGTAACAGT................................................. | 21 | 1 | 14.00 | 10.00 | 10.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................AACAAAAAAAATTTTTAATGATG............................................................................. | 23 | 1 | 11.00 | 11.00 | - | - | 2.00 | - | - | - | - | - | 2.00 | 1.00 | - | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - |
| ....................................................................................................................................................................................AAAAATTTTTTTTGTAACAG.................................................. | 20 | 1 | 10.00 | 10.00 | 10.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TAAAAATTTTTTTTGTAACAGT................................................. | 22 | 1 | 8.00 | 6.00 | 6.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TAAAAATTTTTTTTGTAACAG.................................................. | 21 | 1 | 6.00 | 6.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................TAACAAAAAAAATTTTTAATG................................................................................ | 21 | 1 | 6.00 | 6.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................AACAAAAAAAATTTTTAATG................................................................................ | 20 | 2 | 6.00 | 6.00 | 5.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................GGTAACAAAAAAAATTTTTAA.................................................................................. | 21 | 1 | 5.00 | 5.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................AAAAATTTTTTTTGTAACAGA................................................. | 21 | 1 | 5.00 | 5.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................AGGTAACAAAAAAAATTTTTAA.................................................................................. | 22 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................AACAAAAAAAATTTTTAATGAT.............................................................................. | 22 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................TAACAAAAAAAATTTTTAATGA............................................................................... | 22 | 1 | 3.00 | 3.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........TAATGTAGGAAAGAATGGCTCATT........................................................................................................................................................................................................................ | 24 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................CAGAAAAAACTTGTTGAACAATT......... | 23 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................AACAAAAAAAATTTTTAATGATGT............................................................................ | 24 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................GGTAACAAAAAAAATTTTTA................................................................................... | 20 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TAAAAATTTTTTTTGGGAC.................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................TAAAAATTTTTTTTGTAACAGC................................................. | 22 | 1 | 1.00 | 6.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................AGAAAAAACTTGTTGAACA............ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........TTTAATGTAGGAAAGAATGG.............................................................................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................................................................................................................................TAAAAATTTTTTTTGTAACAGA................................................. | 22 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................TAACAAAAAAAATTTTTAATGAT.............................................................................. | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................TTTTTTATTTTGATTATAGT...................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| ..............................................................................................................................................................................................................................AAAAACTTGTTGAACAATTAACTGG... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................AAGGAAAAACAGAAAAAACTTG................... | 22 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................ATATAGATTTTTAATTATTAGAG............................................................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ....................................................................................................................................................................................AAAAATTTTTTTTGTAACA................................................... | 19 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................AAGGTAACAAAAAAAATTTTT.................................................................................... | 21 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................AACAAAAAAAATTTTTAATGA............................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................GGTAACAAAAAAAATTTTTAAT................................................................................. | 22 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TAAAAATTTTTTTTGGGA..................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................GGTAACAAAAAAAATTTTAAT.................................................................................. | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........AATGTAGGAAAGAATGGCTCAT......................................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ......................................................................................................................................................AACAAAAAAAATTTTTAATGATGTTCT......................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................AAAAATTTTTTTTGTAACAA.................................................. | 20 | 2 | 0.50 | 1.00 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................GTAACAAAAAAAATTTTTA................................................................................... | 19 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................ATGTAAAGGAAAAACAGA............................ | 18 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - | - |
| ...................................................................................................................................................................................TAAAAATTTTTTTTGTAA..................................................... | 18 | 9 | 0.11 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 |
| GGAGAATATTTAATGTAGGAAAGAATGGCTCATTTCTTACAGAACTTTTCATTAACTTGAAAATTCTCACGGTTTATGTTTAATACAATATAGATTTTTAATTATTAGAGTGCCTTAAGTGTTAAGTGTTTTTTATTTTGATTAAAAGGTAACAAAAAAAATTTTTAATGATGTTCTTTTAAAAATTTTTTTTGTAACAGACCGATGTAAAGGAAAAACAGAAAAAACTTGTTGAACAATTAACTGGATT ....................................................................................................................................................((.(((((((((((((((((..........))))))))))))))))).)).................................................... .................................................................................................................................................146...................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189782 | SRR037935(GSM510473) 293cand3. (cell line) | SRR363675(GSM830252) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast) | GSM450602(GSM450602) miRNA sequencing raw reads from post-mortem s. (brain) | SRR189784 | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | SRR029124(GSM416753) HeLa. (hela) | SRR094130(GSM651906) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR191631(GSM715741) 75genomic small RNA (size selected RNA from t. (breast) | SRR037938(GSM510476) 293Red. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR330893(SRX091731) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart) | SRR191614(GSM715724) 92genomic small RNA (size selected RNA from t. (breast) | SRR330880(SRX091718) tissue: skin psoriatic involveddisease state:. (skin) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR040019(GSM532904) G701T. (cervix) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR191557(GSM715667) 57genomic small RNA (size selected RNA from t. (breast) | SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line) | SRR040025(GSM532910) G613T. (cervix) | SRR029126(GSM416755) 143B. (cell line) | SRR191624(GSM715734) 31genomic small RNA (size selected RNA from t. (breast) | TAX577579(Rovira) total RNA. (breast) | SRR189786 | SRR191591(GSM715701) 53genomic small RNA (size selected RNA from t. (breast) | SRR029131(GSM416760) MCF7. (cell line) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330866(SRX091704) tissue: skin psoriatic involveddisease state:. (skin) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR191394(GSM715504) 23genomic small RNA (size selected RNA from t. (breast) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR343335 | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................AGTGCCTTAAGTGTTAATG........................................................................................................................... | 19 | 2.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................GAAAGAATGGCTCATTTAAT.................................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................CAAAAAAAATTTTTAGGA................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................CAAAAAAAATTTTTAGGAC............................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........ATTCTTTCCTACATTAA................................................................................................................................................................................................................................ | 17 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 | - |