ID: uc002rpp.1_intron_30_0_chr2_37299425_r.3p
GENE: HEATR5B(5)
chr2:37299375-37299624-


(1)
BRAIN
(1)
BREAST
(9)
CELL-LINE
(1)
HEART
(1)
HELA
(1)
KIDNEY
(1)
OTHER
(6)
SKIN
(1)
TESTES
(1)
UTERUS

Sense strand
GGACAGTTGTAGGGTTCATCTTGTTTTTTTCCTCAAAGATGCTTCATTGCCTGATGTCCAGTGTCTTGAAAACTGTTGTTTCATTTATTTTGTCGAGTTTTTTGGTTATCTCAGGAGAGGTGGTAAGTCTGGTTCTTGCTATTCCATCTCTGGAAGCAGATGTTATAGGATGTTATTTACTTTTTTGTTTTTAATTCCAGTGTCTACTAGAACTACAGAATGAAGCTGTATTTATGTGGACTGCTGAACT
...........................................................((..(((((..(((..(((((((............(((............))).((((((((((((((.......)))))))..)).))))).)))))))..))).)))))..))............................................................................
..........................................................59...........................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR343336SRR343337SRR189782SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343334SRR343335SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553576(SRX182782)
source: Testis. (testes)
...............................................................TCTTGAAAACTGTTGAC..........................................................................................................................................................................1729.000.0012.0011.00--2.001.00-2.00-1.00-------------------
..............................................................GTCTTGAAAACTGTTGAC..........................................................................................................................................................................1813.000.003.003.00--1.001.003.00------1.00---1.00-----------
..............................................................GTCTTGAAAACTGTTGACT.........................................................................................................................................................................194.000.003.001.00---------------------------
....................................................................................................................................................................................TTTTTTGTTTTTAATTCACAG.................................................214.000.00--4.00--------------------------
...............................................................TCTTGAAAACTGTTGACT.........................................................................................................................................................................184.000.002.001.00---------1.00-----------------
...........................................................................TTGTTTCATTTATTTTGTTC...........................................................................................................................................................203.000.00---3.00-------------------------
............................................................................................................................................................................TTATTTACTTTTTTGTTTTTAATTCCAG..................................................2812.002.00----------2.00------------------
....................................................................................................................................................................................TTTTTTGTTTTTAATTCGCAA.................................................211.000.00----------------1.00------------
...............................................................................................................CAGGAGAGGTGGTAAGTCTGA......................................................................................................................211.000.00-----------------------1.00-----
..............................................................GTCTTGAAAACTGTTGAG..........................................................................................................................................................................181.000.00--------1.00--------------------
.............................................................................................................................................................................................................ACTAGAACTACAGAATGAAGCTG......................2311.001.00-------------------------1.00---
....................................................................................................................................................................................................................................TATTTATGTGGACTGCTGA...1911.001.00------------1.00----------------
....................................................................................................................................................................................TTTTTTGTTTTTAATTCACA..................................................201.000.00--1.00--------------------------
.................................................................................................................................................................................................................................CTGTATTTATGTGGACTG.......1811.001.00-----------1.00-----------------
........................................................................................................................................................................................................................AGAATGAAGCTGTATTTATGTG............2211.001.00---------------------1.00-------
.........................................................................................................................................................................................................................................ATGTGGACTGCTGAAC.1611.001.00---------1.00-------------------
....................................................................................................................................................TCTGGAAGCAGATGTTATCGTA................................................................................221.000.00------------------------1.00----
..............................................................................................................................................................................ATTTACTTTTTTGTTCTTC.........................................................191.000.00---1.00-------------------------
.........................................................................................................................................................................................................................GAATGAAGCTGTATTTATGTGGACTGCTGAAC.3211.001.00--------------1.00--------------
...................................................................................................................................................................................................................ACTACAGAATGAAGCTGTATTTATGTGGACTG.......3211.001.00--------1.00--------------------
..........................................................................................................................................................................................................................AATGAAGCTGTATTTATGTGGACTGC......2611.001.00------------------1.00----------
..............................................................................................................................................................................................................................AAGCTGTATTTATGTGGACTGCTGA...2511.001.00----------------------1.00------
...........................................................................................................................................................................GTTATTTACTTTTTTGTTTCTGC........................................................231.000.00--------------------1.00--------
....................................................................................................................................................................................TTTTTTGTTTTTAATTCATAG.................................................211.000.00--1.00--------------------------
..........................................................................GTTGTTTCATTTATTTCCC.............................................................................................................................................................191.000.00--------------------------1.00--
......................................................................................................................................................................................................................................TTTATGTGGACTGCTGAAC.1911.001.00-------------------1.00---------

Antisense strand
GGACAGTTGTAGGGTTCATCTTGTTTTTTTCCTCAAAGATGCTTCATTGCCTGATGTCCAGTGTCTTGAAAACTGTTGTTTCATTTATTTTGTCGAGTTTTTTGGTTATCTCAGGAGAGGTGGTAAGTCTGGTTCTTGCTATTCCATCTCTGGAAGCAGATGTTATAGGATGTTATTTACTTTTTTGTTTTTAATTCCAGTGTCTACTAGAACTACAGAATGAAGCTGTATTTATGTGGACTGCTGAACT
...........................................................((..(((((..(((..(((((((............(((............))).((((((((((((((.......)))))))..)).))))).)))))))..))).)))))..))............................................................................
..........................................................59...........................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR343336SRR343337SRR189782SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343334SRR343335SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553576(SRX182782)
source: Testis. (testes)
...........................................................................................................................................................................................................................................GTGGACTGCTGAACTGA 171.000.00---------------1.00-------------
..........................................................................................................................................................AGCAGATGTTATAGGGCCT............................................................................. 191.000.00-----1.00-----------------------
.........................................................................................................................................................................................................CTGTAGTTCTAGTAGAC................................ 1720.500.50---------------------------0.50-
............................................ACACTGGACATCAGGCAATG.......................................................................................................................................................................................... 2070.140.14----------------------------0.14