ID: uc002roe.1_intron_0_0_chr2_32390973_f.5p
GENE: (1)
chr2:32390923-32391172+


(12)
B-CELL 		(15)
BREAST 		(33)
CELL-LINE 		(5)
CERVIX 		(8)
HEART 		(3)
HELA 		(3)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(30)
SKIN 		(2)
XRN.ip

Sense strand
TCGAGCACCCAGAACGGCTTCCGGCGGGAGCTGTGCAGCTCCTTATCATGGTGAGTTGGCTGTTGGGGTGAGGGTTTCGGCTGTAGCTGATTCGGTTTATCTTATTTGGTCCCGAAGCGACCTTGAAATCCCTCAGCCACCCAGAGGAGGGGTCATTGGAGTTGAAGTCGGGCCCCTTGGCAGGAGCGGCTGTCTCCCAAAATGTTCCCCTTCAGAGTTCTGGTCCCTTTCGGTCCCTCACCTGTTCCGC
...................................................(((((..((((((((((......)))))))...)))..)))))............................................................................................................................................................
..................................................51...............................................100....................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR029132(GSM416761)
MB-MDA231. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444065(SRX128913)
Sample 22cDNABarcode: AF-PP-335: ACG CTC TTC . (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR029124(GSM416753)
HeLa. (hela)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR040011(GSM532896)
G529T. (cervix)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040007(GSM532892)
G601T. (cervix)		TAX577739(Rovira)
total RNA. (breast)		GSM532890(GSM532890)
G576T. (cervix)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR040022(GSM532907)
G575N. (cervix)		SRR038861(GSM458544)
MM466. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		TAX577453(Rovira)
total RNA. (breast)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
..................................................GTGAGTTGGCTGTTGGGG......................................................................................................................................................................................18241.0041.0031.502.502.001.00--------1.50----------------0.50-0.50-----------------------0.500.500.50------------------------------------------------------
................................................TGGTGAGTTGGCTGTTGGGG......................................................................................................................................................................................20133.0033.0029.001.00-------------2.00------------------------------------1.00-----------------------------------------------------------
...............................................ATGGTGAGTTGGCTGTTGGGG......................................................................................................................................................................................21118.0018.0011.002.00--------1.00---------------2.00--2.00----------------------------------------------------------------------------------
.............................................................................CGGCTGTAGCTGATTCGGT..........................................................................................................................................................19110.0010.004.001.003.00---------------------------------------------------1.00------------------------------------1.00--------------------
............................................ATCATGGTGAGTTGGCTG............................................................................................................................................................................................1819.009.001.00-5.00-------------------2.00-------------------1.00---------------------------------------------------------------------
.............................................................................CGGCTGTAGCTGATTCGGTTTAT......................................................................................................................................................2318.008.00--------------------1.00---------1.00----1.00----1.00---1.00-----1.00-----------------1.00-----------------1.00-------------------------
...............................................ATGGTGAGTTGGCTGTTGG........................................................................................................................................................................................1918.008.004.002.00-----------------------------------------1.00-------------------1.00------------------------------------------------
......................................................................AGGGTTTCGGCTGTAGCT..................................................................................................................................................................1818.008.00-----8.00----------------------------------------------------------------------------------------------------------
..........................................................GCTGTTGGGGTGAGGGTTTCGGCT........................................................................................................................................................................2416.006.00-------6.00--------------------------------------------------------------------------------------------------------
..........................................................GCTGTTGGGGTGAGGGTT..............................................................................................................................................................................1826.006.001.000.502.501.00--------------------------0.50---------------------------0.50-----------------------------------------------------
...................................................................GTGAGGGTTTCGGCTGTAG....................................................................................................................................................................1916.006.003.00------------------------------------------------------1.00--------------------1.00----------------------1.00------------
.......................................................................GGGTTTCGGCTGTAGCTG.................................................................................................................................................................1815.005.002.00--2.00----------1.00-------------------------------------------------------------------------------------------------
...................................................................GTGAGGGTTTCGGCTGGAGC...................................................................................................................................................................204.000.00-4.00--------------------------------------------------------------------------------------------------------------
.......................................TCCTTATCATGGTGAGTTGG...............................................................................................................................................................................................2014.004.00-1.00--------------------------1.00----------1.00--------------------------------------------------------1.00---------------
.............................................................................CGGCTGTAGCTGATTCGG...........................................................................................................................................................1814.004.003.00-------------------------------1.00-------------------------------------------------------------------------------
.............................................................................CGGCTGTAGCTGATTCGGTTT........................................................................................................................................................2114.004.00----------------1.00----------------------------------------------------------1.00------1.00----------1.00------------------
..................................................GTGAGTTGGCTGTTGGGGTG....................................................................................................................................................................................2014.004.00-------------------1.00-2.00------------------------------------------------------------------------------------1.00-----
.........................................CTTATCATGGTGAGTTGG...............................................................................................................................................................................................1814.004.00-------------------------------------2.00----------------------------------------1.00--------1.00------------------------
..................................................................GGTGAGGGTTTCGGCTGTAG....................................................................................................................................................................2013.003.003.00---------------------------------------------------------------------------------------------------------------
.......................................................TTGGCTGTTGGGGTGAGGGT...............................................................................................................................................................................2013.003.002.00---------------------------------------------1.00-----------------------------------------------------------------
...............................................ATGGTGAGTTGGCTGTTGGG.......................................................................................................................................................................................2013.003.002.00--------------------------------1.00------------------------------------------------------------------------------
..........................................TTATCATGGTGAGTTGGCTG............................................................................................................................................................................................2013.003.00-1.00------------------------------------1.00----------------------------------------------------------1.00--------------
...........................................................CTGTTGGGGTGAGGGTTTCGG..........................................................................................................................................................................2113.003.00--------------------------------1.00----------------1.00--------1.00-----------------------------------------------------
..............................................CATGGTGAGTTGGCTGTTGGG.......................................................................................................................................................................................2113.003.003.00---------------------------------------------------------------------------------------------------------------
........................................CCTTATCATGGTGAGTTGG...............................................................................................................................................................................................1913.003.00---1.00--------------1.00----1.00----------------------------------------------------------------------------------------
.......................................................................GGGTTTCGGCTGTAGCTGA................................................................................................................................................................1913.003.003.00---------------------------------------------------------------------------------------------------------------
........................................................................GGTTTCGGCTGTAGCTG.................................................................................................................................................................1713.003.00---2.00----------1.00-------------------------------------------------------------------------------------------------
.............................................................................CGGCTGTAGCTGATTCGGTTTATCTT...................................................................................................................................................2613.003.00---------------------1.00----------------------------------------------------------------------1.00----------1.00--------
....................................................GAGTTGGCTGTTGGGGTGAG..................................................................................................................................................................................2013.003.00-------------------2.00---------------------------------------------------------------------------------------1.00----
......................................................................AGGGTTTCGGCTGTAGCTGAT...............................................................................................................................................................2113.003.002.00----------------1.00----------------------------------------------------------------------------------------------
........................................................................GGTTTCGGCTGTAGCTGAT...............................................................................................................................................................1912.002.00-----------------------1.00------------------------------------------------------------------------------1.00---------
..........................................................GCTGTTGGGGTGAGGGTTT.............................................................................................................................................................................1912.002.00-------------2.00--------------------------------------------------------------------------------------------------
.............................................................................CGGCTGTAGCTGATTCGGTT.........................................................................................................................................................2012.002.00--------------------------------------------1.00---------------------------1.00---------------------------------------
..................................................GTGAGTTGGCTGTTGGGGTGAGG.................................................................................................................................................................................2312.002.002.00---------------------------------------------------------------------------------------------------------------
..................................................GTGAGTTGGCTGTTGGG.......................................................................................................................................................................................1722.002.002.00---------------------------------------------------------------------------------------------------------------
...................................................................GTGAGGGTTTCGGCTGTAGC...................................................................................................................................................................2012.002.001.001.00--------------------------------------------------------------------------------------------------------------
......................................................................AGGGTTTCGGCTGTAGCTG.................................................................................................................................................................1912.002.00--------------1.00---------------------1.00---------------------------------------------------------------------------
...............................................ATGGTGAGTTGGCTGTTGGGGTGAGGGT...............................................................................................................................................................................2812.002.00---1.00----------------------------------1.00-------------------------------------------------------------------------
.................................................................GGGTGAGGGTTTCGGCTGTAGC...................................................................................................................................................................2212.002.002.00---------------------------------------------------------------------------------------------------------------
...................................................TGAGTTGGCTGTTGGGGTGA...................................................................................................................................................................................2012.002.001.00-------1.00-------------------------------------------------------------------------------------------------------
.............................................................................CGGCTGTAGCTGATTCGGG..........................................................................................................................................................1912.004.00--2.00-------------------------------------------------------------------------------------------------------------
..............................................CATGGTGAGTTGGCTGTTGGGG......................................................................................................................................................................................2212.002.00-2.00--------------------------------------------------------------------------------------------------------------
...................................................................GTGAGGGTTTCGGCTGTA.....................................................................................................................................................................1812.002.00-----------1.00---------------1.00------------------------------------------------------------------------------------
.................................................GGTGAGTTGGCTGTTGGGG......................................................................................................................................................................................1922.002.00-0.50-1.00--------------------------------------------------0.50---------------------------------------------------------
......................................................GTTGGCTGTTGGGGTGAGGGT...............................................................................................................................................................................2112.002.002.00---------------------------------------------------------------------------------------------------------------
...............................................................TGGGGTGAGGGTTTCGGCTGTAGCTGATTCGGT..........................................................................................................................................................3312.002.002.00---------------------------------------------------------------------------------------------------------------
.................CTTCCGGCGGGAGCTGTGCAGCTCCTT..............................................................................................................................................................................................................2712.002.00------------2.00---------------------------------------------------------------------------------------------------
..............................................CATGGTGAGTTGGCTGTTGGGGTGAGGGTTT.............................................................................................................................................................................3112.002.00---2.00------------------------------------------------------------------------------------------------------------
.....................CGGCGGGAGCTGTGCTA....................................................................................................................................................................................................................172.000.00------------------------------------------------2.00---------------------------------------------------------------
............................................ATCATGGTGAGTTGGCTGTTGG........................................................................................................................................................................................2212.002.001.00---------------1.00-----------------------------------------------------------------------------------------------
.......................................................................GGGTTTCGGCTGTAGCTGAT...............................................................................................................................................................2012.002.002.00---------------------------------------------------------------------------------------------------------------
............................................ATCATGGTGAGTTGGCTGTTGGGG......................................................................................................................................................................................2412.002.00-2.00--------------------------------------------------------------------------------------------------------------
...................................................................GTGAGGGTTTCGGCTGTAGCTGAT...............................................................................................................................................................2412.002.00-------------------------------1.00------------------------------------------------------------------------1.00-------
........................................CCTTATCATGGTGAGTTGGC..............................................................................................................................................................................................2012.002.00-2.00--------------------------------------------------------------------------------------------------------------
..........................................................GCTGTTGGGGTGAGGGTTTCG...........................................................................................................................................................................2112.002.002.00---------------------------------------------------------------------------------------------------------------
...........................................................CTGTTGGGGTGAGGGTTTCGGCT........................................................................................................................................................................2312.002.001.00-----------------1.00---------------------------------------------------------------------------------------------
........................................................TGGCTGTTGGGGTGAGGG................................................................................................................................................................................1831.671.671.00--0.33---------0.33--------------------------------------------------------------------------------------------------
...................................................TGAGTTGGCTGTTGGGG......................................................................................................................................................................................1721.501.500.50--1.00------------------------------------------------------------------------------------------------------------
........................................................TGGCTGTTGGGGTGAGGGTT..............................................................................................................................................................................2021.501.501.50---------------------------------------------------------------------------------------------------------------
..........................................TTATCATGGTGAGTTGGCTGTTGGGG......................................................................................................................................................................................2611.001.001.00---------------------------------------------------------------------------------------------------------------
....................................................................TGAGGGTTTCGGCTGTAGCTG.................................................................................................................................................................2111.001.001.00---------------------------------------------------------------------------------------------------------------
..................................................................GGTGAGGGTTTCGGCTGTA.....................................................................................................................................................................1911.001.00------------------------------------------------------------------------------------1.00---------------------------
..........................................................................................................................................................................................CGGCTGTCTCCCAAAATGTTC...........................................2111.001.00---------1.00------------------------------------------------------------------------------------------------------
....................................................................TGAGGGTTTCGGCTGTAGCTGAT...............................................................................................................................................................2311.001.00----------------------------------1.00-----------------------------------------------------------------------------
..............CGGCTTCCGGCGGGAGCTGTG.......................................................................................................................................................................................................................2111.001.00-----------------------------------------------------------------------1.00----------------------------------------
....................................................................................................................................................................AAGTCGGGCCCCTTGGCA....................................................................1811.001.00-----------------------------------------------------------------1.00----------------------------------------------
...............................................................................GCTGTAGCTGATTCGGTTTAT......................................................................................................................................................2111.001.00-----------------------------------------------------------------------------------------1.00----------------------
.............................................................................CGGCTGTAGCTGATTCGGTTTA.......................................................................................................................................................2211.001.00--------------------------------------------------1.00-------------------------------------------------------------
.....................................................................GAGGGTTTCGGCTGTAGCTGATTCGGT..........................................................................................................................................................2711.001.00----------------------------------------------------1.00-----------------------------------------------------------
...........................................................................TTCGGCTGTAGCTGATTCGGTTTA.......................................................................................................................................................2411.001.00-------------------------------------------------------------------1.00--------------------------------------------
..................................................GTGAGTTGGCTGTTGGGGT.....................................................................................................................................................................................1921.001.00---------0.50------------------0.50-----------------------------------------------------------------------------------
...................................................................GTGAGGGTTTCGGCTGTGGC...................................................................................................................................................................2011.001.00-1.00--------------------------------------------------------------------------------------------------------------
..............................................CATGGTGAGTTGGCTGTTGGGT......................................................................................................................................................................................2211.003.00-----------------------------------------------------------------------------------1.00----------------------------
.......................................TCCTTATCATGGTGAGTTGGCTG............................................................................................................................................................................................2311.001.00---------------------------------------------1.00------------------------------------------------------------------
...................TCCGGCGGGAGCTGTGCAGCTCCT...............................................................................................................................................................................................................2411.001.00-----------------------------------------1.00----------------------------------------------------------------------
........CCAGAACGGCTTCCGGCGGG..............................................................................................................................................................................................................................2011.001.00-----------------------------------------------------------------------------------------------1.00----------------
..........................................................................................................................................................................................CGGCTGTCTCCCAAAATGTTCCC.........................................2311.001.00-1.00--------------------------------------------------------------------------------------------------------------
........................................................TGGCTGTTGGGGTGAGGGTTT.............................................................................................................................................................................2111.001.001.00---------------------------------------------------------------------------------------------------------------
..................................................GTGAGTTGGCTGTTGGGGTGAGGG................................................................................................................................................................................2411.001.00-------------------------------------------1.00--------------------------------------------------------------------
................................................................................................................................................................GTTGAAGTCGGGCCCCTTGGCAGGAGCG..............................................................2811.001.00---------1.00------------------------------------------------------------------------------------------------------
........................................................................GGTTTCGGCTGTAGCTGA................................................................................................................................................................1811.001.00-------------------------------1.00--------------------------------------------------------------------------------
........................................................TGGCTGTTGGGGTGAGGGTTTCGGCTGTAGCT..................................................................................................................................................................3211.001.00---------1.00------------------------------------------------------------------------------------------------------
................GCTTCCGGCGGGAGCTGTGCAGCTCCTTA.............................................................................................................................................................................................................2911.001.00-------------------------1.00--------------------------------------------------------------------------------------
......................................................GTTGGCTGTTGGGGTGGGGG................................................................................................................................................................................201.000.00------------------------------------------------------------------------------------------1.00---------------------
................................................TGGTGAGTTGGCTGTTGGGGT.....................................................................................................................................................................................2111.001.00---------------------------------------------1.00------------------------------------------------------------------
.......................................................................GGGTTTCGGCTGTAGCTGATT..............................................................................................................................................................2111.001.001.00---------------------------------------------------------------------------------------------------------------
........................CGGGAGCTGTGCAGCTCCTTAT............................................................................................................................................................................................................2211.001.00------------------------------------------------------------------1.00---------------------------------------------
......................................................................AGGGTTTCGGCTGTAGC...................................................................................................................................................................1711.001.00----------1.00-----------------------------------------------------------------------------------------------------
................GCTTCCGGCGGGAGCTGTGCAG....................................................................................................................................................................................................................2211.001.00----------------------------------------------------------------------------------------------1.00-----------------
.......................................................TTGGCTGTTGGGGTGAGG.................................................................................................................................................................................1811.001.001.00---------------------------------------------------------------------------------------------------------------
..........................................................GCTGTTGGGGTGAGGGTTTCGG..........................................................................................................................................................................2211.001.00------------------------1.00---------------------------------------------------------------------------------------
.....................CGGCGGGAGCTGTGCAG....................................................................................................................................................................................................................1711.001.00------1.00---------------------------------------------------------------------------------------------------------
............................................ATCATGGTGAGTTGGCTGT...........................................................................................................................................................................................1911.001.00---------------------------------------------------1.00------------------------------------------------------------
...................................CAGCTCCTTATCATGGTGA....................................................................................................................................................................................................1911.001.00-------------------------------------------------------------------------1.00--------------------------------------
....................................................GAGTTGGCTGTTGGGGTGGG..................................................................................................................................................................................201.000.00-------------------------------------------------1.00--------------------------------------------------------------
........................................................TGGCTGTTGGGGTGAGGGTTTCGG..........................................................................................................................................................................2411.001.00--------------------1.00-------------------------------------------------------------------------------------------
...................................................................GTGAGGGTTTCGGCTGT......................................................................................................................................................................1711.001.00-1.00--------------------------------------------------------------------------------------------------------------
...............................................................TGGGGTGAGGGTTTCGGC.........................................................................................................................................................................1811.001.00----------1.00-----------------------------------------------------------------------------------------------------
................................GTGCAGCTCCTTATCATGGT......................................................................................................................................................................................................2011.001.00---------------------------------------1.00------------------------------------------------------------------------
..................................................GTGAGTTGGCTGTTGGGGTGAGGGT...............................................................................................................................................................................2511.001.00-----------------------------------1.00----------------------------------------------------------------------------
............................................................................TCGGCTGTAGCTGATTCGGT..........................................................................................................................................................2011.001.00-------------------------------------------------------------------------------1.00--------------------------------
.................................................GGTGAGTTGGCTGTTGGG.......................................................................................................................................................................................1821.001.001.00---------------------------------------------------------------------------------------------------------------
..........AGAACGGCTTCCGGCGGGAGCTGTGCAGCTCCTTA.............................................................................................................................................................................................................3511.001.00--------------------------------------------------------------------------------------------------------------1.00-
..............CGGCTTCCGGCGGGAGCTGTGCAGCTCCTT..............................................................................................................................................................................................................3011.001.00----------------------------1.00-----------------------------------------------------------------------------------
...............GGCTTCCGGCGGGAGCTGT........................................................................................................................................................................................................................1911.001.00-------------------------------------------------------------------------------------1.00--------------------------
.......................................................................GGGTTTCGGCTGTAGCTGATTCGG...........................................................................................................................................................2411.001.00----------------------------------------1.00-----------------------------------------------------------------------
......................................................GTTGGCTGTTGGGGTGAGGGTTT.............................................................................................................................................................................2311.001.001.00---------------------------------------------------------------------------------------------------------------
.....................................................................GAGGGTTTCGGCTGTAGC...................................................................................................................................................................1811.001.00---------------------------------1.00------------------------------------------------------------------------------
...................................................................GTGAGGGTTTCGGCTGGATC...................................................................................................................................................................201.000.00-1.00--------------------------------------------------------------------------------------------------------------
.....................................................................GAGGGTTTCGGCTGTAGG...................................................................................................................................................................181.000.00--1.00-------------------------------------------------------------------------------------------------------------
............................................ATCATGGTGAGTTGGCTGTTGGG.......................................................................................................................................................................................2311.001.00--------------------------------------------------------------1.00-------------------------------------------------
...........................................................................TTCGGCTGTAGCTGATT..............................................................................................................................................................1711.001.00------------------------------------------------------------1.00---------------------------------------------------
......................................................................AGGGTTTCGGCTGTAGCTGATT..............................................................................................................................................................2211.001.001.00---------------------------------------------------------------------------------------------------------------
.................................................................GGGTGAGGGTTTCGGCTGTAGCTGAT...............................................................................................................................................................2611.001.001.00---------------------------------------------------------------------------------------------------------------
........................................................TGGCTGTTGGGGTGAGGGAT..............................................................................................................................................................................2031.001.67-----------------------------------------------1.00----------------------------------------------------------------
............................................ATCATGGTGAGTTGGCTTTTT.........................................................................................................................................................................................211.000.00------------------------------------------1.00---------------------------------------------------------------------
...................................................................GTGAGGGTTTCGGCTGTAGCTG.................................................................................................................................................................2211.001.001.00---------------------------------------------------------------------------------------------------------------
...........................................................CTGTTGGGGTGAGGGTTTCGGCTGTAGC...................................................................................................................................................................2811.001.00----------------------------------------------1.00-----------------------------------------------------------------
.........................................................................................................................CTTGAAATCCCTCAGCCACCCAGAGGAGG....................................................................................................2911.001.00----------------1.00-----------------------------------------------------------------------------------------------
.......................GCGGGAGCTGTGCAGCTCCTTAT............................................................................................................................................................................................................2311.001.00-------------------------1.00--------------------------------------------------------------------------------------
........................................CCTTATCATGGTGAGTTGGCTG............................................................................................................................................................................................2211.001.00----------------------1.00-----------------------------------------------------------------------------------------
..................................................................GGTGAGGGTTTCGGCTGGAAT...................................................................................................................................................................211.000.00-1.00--------------------------------------------------------------------------------------------------------------
..........................................TTATCATGGTGAGTTGG...............................................................................................................................................................................................1711.001.00-------------1.00--------------------------------------------------------------------------------------------------
................GCTTCCGGCGGGAGCTGTGCAGCTCCTTAT............................................................................................................................................................................................................3011.001.00-------------------------1.00--------------------------------------------------------------------------------------
................................................................................................................................................AGGAGGGGTCATTGGAGT........................................................................................1811.001.00--------------------1.00-------------------------------------------------------------------------------------------
...........................................................................TTCGGCTGTAGCTGATTCGGT..........................................................................................................................................................2111.001.00------------------------------1.00---------------------------------------------------------------------------------
................................................TGGTGAGTTGGCTGTTGG........................................................................................................................................................................................1811.001.00----------1.00-----------------------------------------------------------------------------------------------------
............................................ATCATGGTGAGTTGGCTGTTT.........................................................................................................................................................................................211.000.00-1.00--------------------------------------------------------------------------------------------------------------
....................................................................TGAGGGTTTCGGCTGTAGGTG.................................................................................................................................................................211.000.00----------------------------------------------------------------------------------------1.00-----------------------
...............................................................TGGGGTGAGGGTTTCGGCTGTAGCTGATTCGGTT.........................................................................................................................................................3411.001.00------------------------------------------------------------------------------------------------------------1.00---
........................................................................GGTTTCGGCTGTAGCTGATTCGGTT.........................................................................................................................................................2511.001.00-----------------------------------------------1.00----------------------------------------------------------------
....................................................GAGTTGGCTGTTGGGGTGAGGGTT..............................................................................................................................................................................2411.001.00-------------------------------------------------------------------------------------------------------------1.00--
..................................................GTGAGTTGGCTGTTGGGGTGAGGGTTT.............................................................................................................................................................................2711.001.00----------------------------------------------------------------------1.00-----------------------------------------
...............................................ATGGTGAGTTGGCTGTTTGGG......................................................................................................................................................................................211.000.00-1.00--------------------------------------------------------------------------------------------------------------
...........................................................CTGTTGGGGTGAGGGTTTCG...........................................................................................................................................................................2011.001.00----------------------------------------------------------------------------------------------------1.00-----------
...................................................................GTGAGGGTTTCGGCTGGATG...................................................................................................................................................................201.000.00-1.00--------------------------------------------------------------------------------------------------------------
..................................................GTGAGTTGGCTGTTGGGGG.....................................................................................................................................................................................1921.0041.00-1.00--------------------------------------------------------------------------------------------------------------
.......................................................TTGGCTGTTGGGGTGAGGGTTT.............................................................................................................................................................................2211.001.00---------------------------------------------------------------------------------1.00------------------------------
......................................................................................................................................AGCCACCCAGAGGAGGGGTCATCGG...........................................................................................251.000.00-----------------------------------------1.00----------------------------------------------------------------------
.....................................................................GAGGGTTTCGGCTGTAGCTGA................................................................................................................................................................2111.001.00---------------------------------------------------------1.00------------------------------------------------------
.............................................................................CGGCTGTAGCTGATTCGGTTTATC.....................................................................................................................................................2411.001.00------------------------1.00---------------------------------------------------------------------------------------
.................CTTCCGGCGGGAGCTGTGCAGCTCCTTATCATG........................................................................................................................................................................................................3311.001.00---1.00------------------------------------------------------------------------------------------------------------
...................................................................GTGAGGGTTTCGGCTGTAGCTGATT..............................................................................................................................................................2511.001.00-------------------------------------------------------------1.00--------------------------------------------------
...................................................................GTGAGGGTTTCGGCTGGAGG...................................................................................................................................................................201.000.00-1.00--------------------------------------------------------------------------------------------------------------
............................................ATCATGGTGAGTTGGCTGTTGGGGTG....................................................................................................................................................................................2611.001.00----------------------------------1.00-----------------------------------------------------------------------------
..........................................TTATCATGGTGAGTTGGCTGTTGGG.......................................................................................................................................................................................2511.001.00---------------------------1.00------------------------------------------------------------------------------------
................................................TGGTGAGTTGGCTGTTGGGGTGTTT.................................................................................................................................................................................251.000.00------------------------1.00---------------------------------------------------------------------------------------
...................................................TGAGTTGGCTGTTGGGGT.....................................................................................................................................................................................1821.001.00----------0.50----------------0.50------------------------------------------------------------------------------------
............................................ATCATGGTGAGTTGGCTGATG.........................................................................................................................................................................................2111.009.00-1.00--------------------------------------------------------------------------------------------------------------
.............................................................................CGGCTGTAGCTGATTCGGTTTT.......................................................................................................................................................2211.004.00--------------------------------------------------------1.00-------------------------------------------------------
..............................................CATGGTGAGTTGGCTGTTGG........................................................................................................................................................................................2011.001.001.00---------------------------------------------------------------------------------------------------------------
......................................CTCCTTATCATGGTGAGTTGG...............................................................................................................................................................................................2111.001.00---------------------------------------------------1.00------------------------------------------------------------
..................................GCAGCTCCTTATCATGGTG.....................................................................................................................................................................................................1911.001.00--------1.00-------------------------------------------------------------------------------------------------------
............................................ATCATGGTGAGTTGGCTGTTG.........................................................................................................................................................................................2111.001.00-1.00--------------------------------------------------------------------------------------------------------------
....................................................GAGTTGGCTGTTGGGGTGT...................................................................................................................................................................................191.000.00--------------------------------------------------------------------------1.00-------------------------------------
...............................................ATGGTGAGTTGGCTGTTG.........................................................................................................................................................................................1811.001.00--------------------------------------------------------------------------------1.00-------------------------------
...........................................TATCATGGTGAGTTGGCTGTTGG........................................................................................................................................................................................2311.001.00---------------1.00------------------------------------------------------------------------------------------------
..........................................................GCTGTTGGGGTGAGGGT...............................................................................................................................................................................1730.670.67--------------0.33---------------------------------------------0.33---------------------------------------------------
.......................................................................GGGTTTCGGCTGTAGC...................................................................................................................................................................1620.500.50---0.50------------------------------------------------------------------------------------------------------------
.......................................................................GGGTTTCGGCTGTAGCT..................................................................................................................................................................1720.500.50-----------------------------------------------------------0.50----------------------------------------------------
.......................................................................GGGTTTCGGCTGTAG....................................................................................................................................................................1520.500.50---0.50------------------------------------------------------------------------------------------------------------
.CGAGCACCCAGAACGG.........................................................................................................................................................................................................................................1620.500.50-----------------------------------------------------0.50----------------------------------------------------------
.....................................................................................................................................................................AGTCGGGCCCCTTGG......................................................................1530.330.33---0.33------------------------------------------------------------------------------------------------------------
...............................TGTGCAGCTCCTTAT............................................................................................................................................................................................................1580.120.12---------------------------0.12------------------------------------------------------------------------------------

Antisense strand
TCGAGCACCCAGAACGGCTTCCGGCGGGAGCTGTGCAGCTCCTTATCATGGTGAGTTGGCTGTTGGGGTGAGGGTTTCGGCTGTAGCTGATTCGGTTTATCTTATTTGGTCCCGAAGCGACCTTGAAATCCCTCAGCCACCCAGAGGAGGGGTCATTGGAGTTGAAGTCGGGCCCCTTGGCAGGAGCGGCTGTCTCCCAAAATGTTCCCCTTCAGAGTTCTGGTCCCTTTCGGTCCCTCACCTGTTCCGC
...................................................(((((..((((((((((......)))))))...)))..)))))............................................................................................................................................................
..................................................51...............................................100....................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR029132(GSM416761)
MB-MDA231. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444065(SRX128913)
Sample 22cDNABarcode: AF-PP-335: ACG CTC TTC . (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR029124(GSM416753)
HeLa. (hela)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR040011(GSM532896)
G529T. (cervix)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040007(GSM532892)
G601T. (cervix)		TAX577739(Rovira)
total RNA. (breast)		GSM532890(GSM532890)
G576T. (cervix)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR040022(GSM532907)
G575N. (cervix)		SRR038861(GSM458544)
MM466. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		TAX577453(Rovira)
total RNA. (breast)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
....................................................................................................................................................................................................................AAAGGGACCAGAACTCTG.................... 18118.0018.00----7.00-4.00-2.001.00-3.00-----------------------------------------------1.00----------------------------------------------------
....................................................................................................................................................................................................................AAGGGACCAGAACTCTG..................... 17112.0012.00----3.00-1.00-1.00--------1.001.00-----------------1.00----------------1.00-----------------------1.00--------------------1.00--1.00----------
....................................................................................................................................................................................................................GAAAGGGACCAGAACTCTG................... 1912.002.00----1.00-1.00---------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................AGGGACCAGAACTCTG...................... 1631.001.00--------0.33--------------------------------------------0.33---------------------------------------------------------0.33
.......................................................................................................................................................................TCGGGCCCCTTGGCAAGCG................................................................ 191.000.00-----------------------1.00----------------------------------------------------------------------------------------
....................................................................................................CTTATTTGGTCCCGAC...................................................................................................................................... 161.000.00-----------------1.00----------------------------------------------------------------------------------------------
.............................................................GTTGGGGTGAGGGTTCCT........................................................................................................................................................................... 181.000.00---------------------------------------------------------------------------------------------------------1.00------
......................................................................................................................................................................................................................GAGTTCTGGTCCCTTTAG.................. 181.000.00----1.00-----------------------------------------------------------------------------------------------------------
...................TCCGGCGGGAGCTGTTGG..................................................................................................................................................................................................................... 181.000.00---------------------------------------------------------------------1.00------------------------------------------
..............................................................TTGGGGTGAGGGTTTCAAAG........................................................................................................................................................................ 201.000.00----------------------------------------------------------------1.00-----------------------------------------------
....................................................................................................................................................................................................................GGGACCAGAACTCTG....................... 1590.110.11--------0.11-------------------------------------------------------------------------------------------------------