ID: uc002rmy.2_intron_20_0_chr2_29519924_r.3p
GENE: (8)
chr2:29519874-29520123-


(1)
BREAST
(5)
CELL-LINE
(3)
CERVIX
(1)
HEART
(1)
KIDNEY
(1)
OTHER
(30)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
CGTTCAGTTATCCTAGGAAATGGGATACTTGAACTTCACTGAAAGCCTCTTGGTGAGACAGGTGGTGGGCATCCAGCTCTTCTCACCAGGCTGAACTCAGCTGAGTCTCTTATAAGGTCCTTGAAACTTCAGTGGAGAATTCCAGAAAGGGGACCTTTCAGCAATCATACCTTGTCCTCTGACTCTTCTCGCCCTCACAGCTCCGAATGTCCTGGCTCATTCGTGGAGTCTTGAGGGGAAACGTGTCCTT
..............................................................................(((.((....(((((....)))))((((((((....((((.......))))....))))).)))..))))).....................................................................................................
.............................................................................78......................................................................150..................................................................................................
SizePerfect hitTotal NormPerfect NormSRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189782SRR040008(GSM532893)
G727N. (cervix)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040006(GSM532891)
G601N. (cervix)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...............................................................................................................................TTCAGTGGAGAATTCTCGC........................................................................................................1934.000.003.001.00--2.001.002.002.001.002.001.001.001.00--1.00-1.001.001.00-1.001.001.00--1.001.00-1.00---1.001.001.00-1.001.00-1.00--1.00-
...............................................................................................................................TTCAGTGGAGAATTCTCG.........................................................................................................189.000.00---1.00----1.00-------1.00--------1.00--1.00---1.00---1.00--1.00--1.00--
...............................................................................................................................TTCAGTGGAGAATTCTC..........................................................................................................173.000.00-1.00----------------------1.00----------------1.00---
............................................................................................................................AACTTCAGTGGAGAAGGTA...........................................................................................................191.000.00---1.00-----------------------------------------
.............................................................................................................................ACTTCAGTGGAGAATTATTG.........................................................................................................201.000.00--1.00------------------------------------------
..................................................................................TCACCAGGCTGAACTCACTC....................................................................................................................................................201.000.00------------------------------1.00--------------
.GTTCAGTTATCCTAGGAAA......................................................................................................................................................................................................................................1911.001.00-------------------------------1.00-------------
.........................................................................................................................................................................................TTCTCGCCCTCACAGCCCCG.............................................201.000.00--1.00------------------------------------------
.............................................................................................................................................................................................................................CGTGGAGTCTTGAGGGGAAA.........2011.001.00--------------------1.00------------------------
............CTAGGAAATGGGATAGGTC...........................................................................................................................................................................................................................191.000.00--------------1.00------------------------------
..................................................................................................................................................AAGGGGACCTTTCAG.........................................................................................1540.250.25--------------------------------------------0.25

Antisense strand
CGTTCAGTTATCCTAGGAAATGGGATACTTGAACTTCACTGAAAGCCTCTTGGTGAGACAGGTGGTGGGCATCCAGCTCTTCTCACCAGGCTGAACTCAGCTGAGTCTCTTATAAGGTCCTTGAAACTTCAGTGGAGAATTCCAGAAAGGGGACCTTTCAGCAATCATACCTTGTCCTCTGACTCTTCTCGCCCTCACAGCTCCGAATGTCCTGGCTCATTCGTGGAGTCTTGAGGGGAAACGTGTCCTT
..............................................................................(((.((....(((((....)))))((((((((....((((.......))))....))))).)))..))))).....................................................................................................
.............................................................................78......................................................................150..................................................................................................
SizePerfect hitTotal NormPerfect NormSRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189782SRR040008(GSM532893)
G727N. (cervix)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040006(GSM532891)
G601N. (cervix)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.............................................................................................................................................................................................CGCCCTCACAGCTCCGGGAG......................................... 201.000.00-----1.00---------------------------------------
......................................................................................................................................................................................................................................TTGAGGGGAAACGTGTTTG. 191.000.00-------------1.00-------------------------------