ID: uc002qzh.2_intron_8_0_chr2_9475309_f.5p
GENE: ASAP2(9)
chr2:9475259-9475508+


(1)
AGO2.ip 		(1)
B-CELL 		(4)
BRAIN 		(2)
BREAST 		(5)
CELL-LINE 		(6)
CERVIX 		(2)
HEART 		(1)
LIVER 		(1)
OTHER 		(1)
RRP40.ip 		(5)
SKIN 		(1)
UTERUS

Sense strand
TACAGCTTCGAGATATTTTGAAATCCGCATTGCAGGTTGAACAGAAAGAGGTGAGGGGATTTAATTTTGAAAGATTGCAGTTTTCACCCCATTCTTGGAGGCTTTGGGTCTGAAGAACATGAAGTTCATGTCTTCTAGGAGCTCACAGTTCACTCGGGCTGTGTCAGGCACCAGTAAAACATTTAATGTATTCTTGCAATTTAGTTCTATAAAACCATCTTTTAAAATATGTTTATTTCAGGAGGAAGCA
......................................................................((((.((..((....))..)).)))).((((((.(((((((((((.(((((.....)))))))))..))).)))).)))...)))...............................................................................................
....................................................................69......................................................................................157...........................................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR040042(GSM532927)
G428N. (cervix)		SRR040043(GSM532928)
G428T. (cervix)		SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343336SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040014(GSM532899)
G623N. (cervix)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR343335SRR029130(GSM416759)
DLD2. (cell line)		SRR040012(GSM532897)
G648N. (cervix)		SRR040032(GSM532917)
G603N. (cervix)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029131(GSM416760)
MCF7. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040035(GSM532920)
G001T. (cervix)		SRR343337SRR553574(SRX182780)
source: Heart. (Heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
.....................................................................................................................................TCTAGGAGCTCACAGTCTAT.................................................................................................2089.000.0075.0011.002.00-1.00----------------------------
.....................................................................................................................................TCTAGGAGCTCACAGTCGAG.................................................................................................2022.000.0021.00--1.00-----------------------------
.....................................................................................................................................TCTAGGAGCTCACAGTCTAC.................................................................................................2016.000.0015.00----------------------1.00---------
.....................................................................................................................................TCTAGGAGCTCACAGTCTCG.................................................................................................209.000.009.00--------------------------------
.....................................................................................................................................TCTAGGAGCTCACAGTATAG.................................................................................................206.000.004.00---------------1.00---------1.00------
.....................................................................................................................................TCTAGGAGCTCACAGTTTAG.................................................................................................206.000.006.00--------------------------------
.....................................................................................................................................TCTAGGAGCTCACAGTCTTG.................................................................................................205.000.005.00--------------------------------
.....................................................................................................................................TCTAGGAGCTCACAGTCTTT.................................................................................................204.000.004.00--------------------------------
.....................................................................................................................................TCTAGGAGCTCACAGTGTAT.................................................................................................204.000.00-2.002.00------------------------------
.....................................................................................................................................TCTAGGAGCTCACAGTGTAG.................................................................................................204.000.004.00--------------------------------
.....................................................................................................................................TCTAGGAGCTCACAGTGTA..................................................................................................194.000.001.001.002.00------------------------------
.....................................................................................................................................TCTAGGAGCTCACAGTCGAT.................................................................................................203.000.003.00--------------------------------
.....................................................................................................................................TCTAGGAGCTCACAGTTTAGT................................................................................................213.000.001.00------------------1.00----------1.00--
.....................................................................................................................................TCTAGGAGCTCACAGTCACG.................................................................................................202.000.002.00--------------------------------
.....................................................................................................................................TCTAGGAGCTCACAGTCGA..................................................................................................192.000.002.00--------------------------------
..................................GGTTGAACAGAAAGATC.......................................................................................................................................................................................................172.000.00-----2.00---------------------------
.....................................................................................................................................TCTAGGAGCTCACAGTCCAT.................................................................................................202.000.002.00--------------------------------
......................ATCCGCATTGCAGGTTGAACAGAAAGAGGACTC...................................................................................................................................................................................................331.000.00------1.00--------------------------
.................................AGGTTGAACAGAAAGAGT.......................................................................................................................................................................................................181.000.00------------------------1.00--------
.....................................................................................................................................TCTAGGAGCTCACAGTCTTC.................................................................................................201.000.001.00--------------------------------
.....................................................................................................................................TCTAGGAGCTCACAGTAAAG.................................................................................................201.000.001.00--------------------------------
.....................................................................................................................................TCTAGGAGCTCACAGTGTAA.................................................................................................201.000.00-1.00-------------------------------
.....................................................................................................................................TCTAGGAGCTCACAGTCAAC.................................................................................................201.000.001.00--------------------------------
...............................GCAGGTTGAACAGAAAGAGGACT....................................................................................................................................................................................................231.000.00-------------------------1.00-------
.................................................................................................................................................................................................................TAAAACCATCTTTTAAATGGT....................211.000.00------------1.00--------------------
........................CCGCATTGCAGGTTGAACAGAAAGAGGACTC...................................................................................................................................................................................................311.000.00----1.00----------------------------
............................ATTGCAGGTTGAACAGAAAGAG........................................................................................................................................................................................................2211.001.00------------------1.00--------------
........CGAGATATTTTGAAATCCGCATTGCAGG......................................................................................................................................................................................................................2811.001.00-----------------1.00---------------
.....................................................................................................................................TCTAGGAGCTCACAGTCGAC.................................................................................................201.000.001.00--------------------------------
.................................AGGTTGAACAGAAAGCCA.......................................................................................................................................................................................................181.000.00---------------------1.00-----------
.....................................................................................................................................TCTAGGAGCTCACAGTCTCA.................................................................................................201.000.001.00--------------------------------
.....................................................................................................................................TCTAGGAGCTCACAGTGGAT.................................................................................................201.000.001.00--------------------------------
.....................................................................................................................................TCTAGGAGCTCACAGTCTTA.................................................................................................201.000.001.00--------------------------------
.......................TCCGCATTGCAGGTTGAACAGAAAGAGGA......................................................................................................................................................................................................291.000.00-------------------------------1.00-
..........................GCATTGCAGGTTGAACAGAAAGAGGACT....................................................................................................................................................................................................281.000.00----------1.00----------------------
.....................................................................................................................................TCTAGGAGCTCACAGTCTCT.................................................................................................201.000.001.00--------------------------------
..................................................................................................AGGCTTTGGGTCTGAAGAACATGAAGTTC...........................................................................................................................2911.001.00-----------1.00---------------------
.....................................................................................................................................TCTAGGAGCTCACAGTCCTC.................................................................................................201.000.001.00--------------------------------
.....................................................................................................................................TCTAGGAGCTCACAGTCCCG.................................................................................................201.000.001.00--------------------------------
.........................CGCATTGCAGGTTGAACAGAAAGAGG.......................................................................................................................................................................................................2611.001.00---------1.00-----------------------
.....................AATCCGCATTGCAGGTTGAACAGAAAGAGGAC.....................................................................................................................................................................................................321.000.00----1.00----------------------------
.....................................................................................................................................TCTAGGAGCTCACAGCGAG..................................................................................................191.000.00---1.00-----------------------------
.....................................................................................................................................TCTAGGAGCTCACAGTCTGT.................................................................................................201.000.001.00--------------------------------
...........................CATTGCAGGTTGAACAGAAAGAGGTGA....................................................................................................................................................................................................2711.001.00---------------------------1.00-----
.....................................................................................................................................TCTAGGAGCTCACAGTTTAGC................................................................................................211.000.001.00--------------------------------
.....................................................................................................................................TCTAGGAGCTCACAGTCGAA.................................................................................................201.000.001.00--------------------------------
........................................................................................................................................AGGAGCTCACAGTTCATTGA..............................................................................................201.000.00---------------1.00-----------------
.....................................................................................................................................TCTAGGAGCTCACAGTATAT.................................................................................................201.000.001.00--------------------------------
...............................GCAGGTTGAACAGAAAGAGGACTC...................................................................................................................................................................................................241.000.00-------1.00-------------------------
.........................................................................ATTGCAGTTTTCACCCCCGGT............................................................................................................................................................211.000.00--------------1.00------------------
.....................................................................................................................................TCTAGGAGCTCACAGTGAA..................................................................................................191.000.00-1.00-------------------------------
.....................................................................................................................................TCTAGGAGCTCACAGTAA...................................................................................................181.000.00----------------------1.00----------
......................................GAACAGAAAGAGGTGAGGG.................................................................................................................................................................................................1930.330.33--------------------------------0.33

Antisense strand
TACAGCTTCGAGATATTTTGAAATCCGCATTGCAGGTTGAACAGAAAGAGGTGAGGGGATTTAATTTTGAAAGATTGCAGTTTTCACCCCATTCTTGGAGGCTTTGGGTCTGAAGAACATGAAGTTCATGTCTTCTAGGAGCTCACAGTTCACTCGGGCTGTGTCAGGCACCAGTAAAACATTTAATGTATTCTTGCAATTTAGTTCTATAAAACCATCTTTTAAAATATGTTTATTTCAGGAGGAAGCA
......................................................................((((.((..((....))..)).)))).((((((.(((((((((((.(((((.....)))))))))..))).)))).)))...)))...............................................................................................
....................................................................69......................................................................................157...........................................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR040042(GSM532927)
G428N. (cervix)		SRR040043(GSM532928)
G428T. (cervix)		SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343336SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040014(GSM532899)
G623N. (cervix)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR343335SRR029130(GSM416759)
DLD2. (cell line)		SRR040012(GSM532897)
G648N. (cervix)		SRR040032(GSM532917)
G603N. (cervix)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029131(GSM416760)
MCF7. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040035(GSM532920)
G001T. (cervix)		SRR343337SRR553574(SRX182780)
source: Heart. (Heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
.....................................................................AAAGATTGCAGTTTTTG.................................................................................................................................................................... 173.000.002.00--1.00-----------------------------
..............................................................................................TTGGAGGCTTTGGGTAAAG......................................................................................................................................... 192.000.00--------1.00--------------------1.00---
.........................................................................................................................................................................................ATGTATTCTTGCAATTCTG.............................................. 192.000.001.00--1.00-----------------------------
..........................................................................................................................................................................................TGTATTCTTGCAATTGTCG............................................. 191.000.001.00--------------------------------
...............................................GAGGTGAGGGGATTTCCAG........................................................................................................................................................................................ 191.000.00--------------------1.00------------
.................................................................................................................................................................................AACATTTAATGTATTCAG....................................................... 181.000.00----------------------------1.00----
..............................................................................................................................................................................................................CTATAAAACCATCTTTTGGCG....................... 211.000.00-------------1.00-------------------