uc002quu.2_intron_0_0_chr1_1271896

CCCGGGCTTTAGCTATGGCAGCGGCAGCACCGGGAGTCAGCAGAGTGAAGGTGAGAACGCCGCCCCTACCTGCCCTTCCCCGGCTCCGCCCCCAGCTCCGCCCCACTCCACTGCTGCTCCGCCCCCAGTTCCACCCCACCCCGCTGCTGCTCCACCCCCAGCTCCACCCCACCCCGCTGCTGCTCCGCCCTGCTTCTCTGCTGACCCCAATCCCATGCTCCTGCTGTGTACTTGGGCCCTGGGTGGGCTC
.................................................................................(((...((.....))...))).......((((..((...))...)))).........................................................................................................................
.........................................................................74...............................................................139.............................................................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR040012(GSM532897)
G648N. (cervix)

SRR040011(GSM532896)
G529T. (cervix)

TAX577741(Rovira)
total RNA. (breast)

SRR040032(GSM532917)
G603N. (cervix)

SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR040018(GSM532903)
G701N. (cervix)

SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)

GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR040028(GSM532913)
G026N. (cervix)

SRR040008(GSM532893)
G727N. (cervix)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

TAX577589(Rovira)
total RNA. (breast)

SRR040024(GSM532909)
G613N. (cervix)

SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)

GSM532876(GSM532876)
G547T. (cervix)

SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)

SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)

SRR040029(GSM532914)
G026T. (cervix)

SRR189782

TAX577744(Rovira)
total RNA. (breast)

SRR040020(GSM532905)
G699N_2. (cervix)

SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)

RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)

SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)

SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)

SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)

SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)

SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)

SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)

SRR040030(GSM532915)
G013N. (cervix)

SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)

TAX577746(Rovira)
total RNA. (breast)

SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)

SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)

SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)

SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)

SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)

SRR040016(GSM532901)
G645N. (cervix)

GSM532880(GSM532880)
G659T. (cervix)

SRR040036(GSM532921)
G243N. (cervix)

SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)

SRR037937(GSM510475)
293cand2. (cell line)

SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)

SRR040007(GSM532892)
G601T. (cervix)

SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)

SRR029127(GSM416756)
A549. (cell line)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

TAX577590(Rovira)
total RNA. (breast)

SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)

SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)

TAX577742(Rovira)
total RNA. (breast)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

TAX577579(Rovira)
total RNA. (breast)

SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)

SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)

SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)

SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)

TAX577453(Rovira)
total RNA. (breast)

SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)

SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)

SRR191584(GSM715694)
98genomic small RNA (size selected RNA from t. (breast)

GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)

SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)

SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)

TAX577743(Rovira)
total RNA. (breast)

SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)

SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)

SRR343333(GSM796036)
KSHV (HHV8). (cell line)

SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)

..............................................................................CCCGGCTCCGCCCCCCGGC.........................................................................................................................................................

47.00

0.00

7.00

4.00

3.00

2.00

1.00

2.00

3.00

2.00

1.00

2.00

1.00

..............................................................................CCCGGCTCCGCCCCCCGG..........................................................................................................................................................

7.00

0.00

1.00

.............................................................................CCCCGGCTCCGCCCCCCGGC.........................................................................................................................................................

6.00

0.00

1.00

................................................................................CGGCTCCGCCCCCAGGCC........................................................................................................................................................

3.00

0.00

1.00

..............................................................................CCCGGCTCCGCCCCCCGCC.........................................................................................................................................................

3.00

0.00

1.00

.............................................................................CCCCGGCTCCGCCCCCCGG..........................................................................................................................................................

2.00

0.00

1.00

..............................................................................CCCGGCTCCGCCCCCAGGCC........................................................................................................................................................

2.00

0.00

1.00

..............................................................................CCCGGCTCCGCCCCCCCGC.........................................................................................................................................................

2.00

0.00

1.00

..............................................................................CCCGGCTCCGCCCCCCGTC.........................................................................................................................................................

1.00

0.00

1.00

............................................................................................CAGCTCCGCCCCACTCCACTGC........................................................................................................................................

1.00

........................................................................................................................................CACCCCGCTGCTGCTC..................................................................................................

1.00

...........................................................................................CCAGCTCCGCCCCACGGC.............................................................................................................................................

1.00

0.00

1.00

.....................CGGCAGCACCGGGAGTCAGCAGAGTG...........................................................................................................................................................................................................

1.00

.......................................................................................................................................................................................................................................TTGGGCCCTGGGTGGACG.

1.00

0.00

1.00

..............................................................................CCCGGCTCCGCCCCCCGGA.........................................................................................................................................................

1.00

0.00

1.00

.............................................................................CCCCGGCTCCGCCCCCCAGC.........................................................................................................................................................

1.00

0.00

1.00

...................................................................ACCTGCCCTTCCCCGGCTCCGCCCCC.............................................................................................................................................................

1.00

..............................................................................CCCGGCTCCGCCCCCCCG..........................................................................................................................................................

1.00

0.00

1.00

.............................................................................CCCCGGCTCCGCCCCCCG...........................................................................................................................................................

1.00

0.00

1.00

.........................................................................CCTTCCCCGGCTCCGCCCC..............................................................................................................................................................

1.00

..............................................................................CCCGGCTCCGCCCCCCGGT.........................................................................................................................................................

1.00

0.00

1.00

.....................CGGCAGCACCGGGAGCGAC..................................................................................................................................................................................................................

1.00

0.00

1.00

..............ATGGCAGCGGCAGCACC...........................................................................................................................................................................................................................

1.00

................................................................................................................GCTGCTCCGCCCCCAGTTCAAGC...................................................................................................................

1.00

0.00

1.00

.CCGGGCTTTAGCTATGGCAGCGGCAGCACC...........................................................................................................................................................................................................................

1.00

.........................................................................................................................................ACCCCGCTGCTGCTCCACC..............................................................................................

1.00

............................ACCGGGAGTCAGCAGAGTGAA.........................................................................................................................................................................................................

1.00

.................................GAGTCAGCAGAGTGAAGG.......................................................................................................................................................................................................

1.00

..CGGGCTTTAGCTATGGCAGCGGCAG...............................................................................................................................................................................................................................

1.00

............................................................................................................................................................CCCAGCTCCACCCCATCA............................................................................

1.00

0.00

1.00

...................AGCGGCAGCACCGGGAGTCAGC.................................................................................................................................................................................................................

1.00

...............................................................................CCGGCTCCGCCCCCAGGCCC.......................................................................................................................................................

1.00

0.00

1.00

.......................GCAGCACCGGGAGTCAGCAGAGTGA..........................................................................................................................................................................................................

1.00

.....................................................................................................................TCCGCCCCCAGTTCC......................................................................................................................

0.33

.....................................................................................................................TCCGCCCCCAGTTCCCCCC..................................................................................................................

0.33

Size

Perfect hit

Total Norm

Perfect Norm

SRR040012(GSM532897)
G648N. (cervix)

SRR040011(GSM532896)
G529T. (cervix)

TAX577741(Rovira)
total RNA. (breast)

SRR040032(GSM532917)
G603N. (cervix)

SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR040018(GSM532903)
G701N. (cervix)

SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)

GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR040028(GSM532913)
G026N. (cervix)

SRR040008(GSM532893)
G727N. (cervix)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

TAX577589(Rovira)
total RNA. (breast)

SRR040024(GSM532909)
G613N. (cervix)

SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)

GSM532876(GSM532876)
G547T. (cervix)

SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)

SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)

SRR040029(GSM532914)
G026T. (cervix)

SRR189782

TAX577744(Rovira)
total RNA. (breast)

SRR040020(GSM532905)
G699N_2. (cervix)

SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)

RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)

SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)

SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)

SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)

SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)

SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)

SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)

SRR040030(GSM532915)
G013N. (cervix)

SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)

TAX577746(Rovira)
total RNA. (breast)

SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)

SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)

SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)

SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)

SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)

SRR040016(GSM532901)
G645N. (cervix)

GSM532880(GSM532880)
G659T. (cervix)

SRR040036(GSM532921)
G243N. (cervix)

SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)

SRR037937(GSM510475)
293cand2. (cell line)

SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)

SRR040007(GSM532892)
G601T. (cervix)

SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)

SRR029127(GSM416756)
A549. (cell line)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

TAX577590(Rovira)
total RNA. (breast)

SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)

SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)

TAX577742(Rovira)
total RNA. (breast)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

TAX577579(Rovira)
total RNA. (breast)

SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)

SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)

SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)

SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)

TAX577453(Rovira)
total RNA. (breast)

SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)

SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)

SRR191584(GSM715694)
98genomic small RNA (size selected RNA from t. (breast)

GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)

SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)

SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)

TAX577743(Rovira)
total RNA. (breast)

SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)

SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)

SRR343333(GSM796036)
KSHV (HHV8). (cell line)

SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)

..............................................................................................................................AGTTCCACCCCACCCCTG..........................................................................................................

3.00

0.00

1.00

3.00

0.00

1.00

2.00

0.00

1.00

.....................................................................................................................................CCCCACCCCGCTGCTGCTCCAAGC.............................................................................................

1.00

0.00

1.00

0.00

1.00

...........................................................................................................................................................................CCCCGCTGCTGCTCCGAGAG...........................................................

1.00

0.00

1.00

0.00

1.00

.....................................................................................................CCCACTCCACTGCTGCTTTGT................................................................................................................................

1.00

0.00

1.00

.....................................................................................................CCCACTCCACTGCTGCTCTAT................................................................................................................................

1.00

0.00

1.00

.....................................................................................................CCCACTCCACTGCTGCTTCGT................................................................................................................................

1.00

0.00

1.00

0.00

1.00

0.00

1.00

0.00

1.00

.....................................................................................................CCCACTCCACTGCTGCTCTGT................................................................................................................................

1.00

0.00

1.00

.........................................................................CCTTCCCCGGCTCCGCCCGGG............................................................................................................................................................

1.00

0.00

1.00

.........................................................................................TGGGGCGGAGCTGGGG.................................................................................................................................................

0.11