ID: uc002qtn.2_intron_4_0_chr19_59082797_r.5p
GENE: (1)
chr19:59084540-59084789-


(15)
B-CELL 		(2)
BRAIN 		(4)
BREAST 		(28)
CELL-LINE 		(4)
CERVIX 		(2)
HEART 		(4)
HELA 		(7)
LIVER 		(2)
OTHER 		(2)
RRP40.ip 		(18)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
GGCCGTGATTGGTGCAGGATCCTGCTAATCTCAGGAAGGCCCGTAGAGAAGTGAGGAAAACGTGGTGGGGGGCATGCGCGATCTGGTAGGCGGTGCTGCCGTCTGTTGTACCTGAGAGGCTTGCGCATGCCGACGCACGGATTCGAGGCGGGGAGCATGGGAAGAAGCGGCCAGGAGTATGACCTGATCATTGCGACCACCGCTAGGGGAAGGGAGGAGAGGGTGTAGAAACGGGGACGAGGGTGGGGGA
............................................................(((((((.....))).))))..(((.....))).............................................................................................................................................................
..................................................51..........................................95..........................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR040028(GSM532913)
G026N. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR037936(GSM510474)
293cand1. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040011(GSM532896)
G529T. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		TAX577589(Rovira)
total RNA. (breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR189785SRR040031(GSM532916)
G013T. (cervix)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532890(GSM532890)
G576T. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR029127(GSM416756)
A549. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR038859(GSM458542)
MM386. (cell line)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038857(GSM458540)
D20. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR038862(GSM458545)
MM472. (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.........................................................................ATGCGCGATCTGGTAGGC...............................................................................................................................................................1818.008.00-2.003.00------------------1.00----------------------------------------1.00-----------------------1.00-
.....................................................................................................TCTGTTGTACCTGAGAGGCT.................................................................................................................................2016.006.00-1.00------------1.00----------1.00-----------------------1.00------------------------1.00-------1.00-----
...........................................................................GCGCGATCTGGTAGGCGGTG...........................................................................................................................................................2016.006.001.00----4.00-1.00--------------------------------------------------------------------------------
...................................AAGGCCCGTAGAGAAGTG.....................................................................................................................................................................................................1815.005.00----------2.00-1.002.00--------------------------------------------------------------------------
......................................................................................................CTGTTGTACCTGAGAGGCTTGC..............................................................................................................................2213.003.00------2.00------------------------------------------------------------------1.00--------------
.............................................................................................................ACCTGAGAGGCTTGCGC............................................................................................................................1713.003.00---2.00-------------1.00----------------------------------------------------------------------
...........................................................................................................................................................................................................................AGGGTGTAGAAACGGGGA.............1813.003.00---------------------------1.00-----------------------1.00---------------1.00--------------------
...................................................................................................CGTCTGTTGTACCTGAGAGG...................................................................................................................................2012.002.00----2.00-----------------------------------------------------------------------------------
........................................................................................................................................ACGGATTCGAGGCGGGGAGCA.............................................................................................2112.002.00-------------------2.00--------------------------------------------------------------------
...........................................................................GCGCGATCTGGTAGGCG..............................................................................................................................................................1712.002.00---2.00------------------------------------------------------------------------------------
................................................................................ATCTGGTAGGCGGTGCTG........................................................................................................................................................1812.002.001.00--------1.00------------------------------------------------------------------------------
....................................................................................................GTCTGTTGTACCTGAGAGGC..................................................................................................................................2012.002.00----1.00---------------------------------1.00-------------------------------------------------
.............................................................................................................ACCTGAGAGGCTTGCGCATG.........................................................................................................................2012.002.00----------------------1.001.00----------------------------------------------------------------
.............................................................................GCGATCTGGTAGGCGGTG...........................................................................................................................................................1812.002.00----------------------------1.00-----------------------------1.00-----------------------------
.......................................................................................................TGTTGTACCTGAGAGGCTTG...............................................................................................................................2012.002.00----------------------1.00--------------------------------------------------------1.00--------
...............................................GAAGTGAGGAAAACGTGGTG.......................................................................................................................................................................................2012.002.00---------------------------------------------------------------1.00------------1.00-----------
........................................................................................................................................ACGGATTCGAGGCGGGGAG...............................................................................................1912.002.00--------1.00---------------------------------------------------------1.00---------------------
............................................................................CGCGATCTGGTAGGCGGTG...........................................................................................................................................................1912.002.00-----------------------1.00-----------------------------------------------------1.00----------
............................................................................................................................................................ATGGGAAGAAGCGGCCAGGAGTAC......................................................................242.000.00-----------2.00----------------------------------------------------------------------------
...............................................................GGTGGGGGGCATGCGCGA.........................................................................................................................................................................1812.002.00------------------------2.00---------------------------------------------------------------
.............................................................................GCGATCTGGTAGGCGGTGCTG........................................................................................................................................................2112.002.00-------------------------------------1.00----------------------------------------------1.00---
.....................................................................................................................................................................................................................................AACGGGGACGAGGGTGGGGGA2112.002.00----------------------------------1.00-----1.00-----------------------------------------------
................................................................................................................................................................................................GCGACCACCGCTAGGGGAAGGGA...................................2311.001.00------------------------------------1.00---------------------------------------------------
...........................................................................................................................................................................................................TAGGGGAAGGGAGGAGAGGGTAA........................231.000.00--------------------------------------------------------------------------------1.00-------
..............................TCAGGAAGGCCCGTAGA...........................................................................................................................................................................................................1711.001.00------------------------------------------1.00---------------------------------------------
........................................................................................................................TTGCGCATGCCGACGCACGG..............................................................................................................2011.001.00--------------------------------------------1.00-------------------------------------------
....................................................................GGGGCATGCGCGATCTGGT...................................................................................................................................................................1911.001.00-------1.00--------------------------------------------------------------------------------
......................................................................................................................................GCACGGATTCGAGGCGGGGAG...............................................................................................2111.001.00-------1.00--------------------------------------------------------------------------------
...........................................................................GCGCGATCTGGTAGGCGGTGC..........................................................................................................................................................2111.001.001.00---------------------------------------------------------------------------------------
..............................................................................CGATCTGGTAGGCGGTG...........................................................................................................................................................1711.001.00-1.00--------------------------------------------------------------------------------------
..............................................................................CGATCTGGTAGGCGGTGCTG........................................................................................................................................................2011.001.00---------1.00------------------------------------------------------------------------------
....................................................................GGGGCATGCGCGATCTGG....................................................................................................................................................................1811.001.00---1.00------------------------------------------------------------------------------------
...........................................................................GCGCGATCTGGTAGGCGC.............................................................................................................................................................1811.002.001.00---------------------------------------------------------------------------------------
....................................AGGCCCGTAGAGAAGTGAG...................................................................................................................................................................................................1911.001.00-----------------------------------------------------------------1.00----------------------
.........................................................................................................................................................................................................................AGAGGGTGTAGAAACGGG...............1811.001.00------------------------------------------------------------------------1.00---------------
....................................................................................................................................ACGCACGGATTCGAGGCGGGG.................................................................................................2111.001.00---------------------1.00------------------------------------------------------------------
...........................................................................GCGCGATCTGGTAGGCGGTGCTGGC......................................................................................................................................................251.000.00--------------------1.00-------------------------------------------------------------------
.................................................................................................GCCGTCTGTTGTACCTG........................................................................................................................................1711.001.00--1.00-------------------------------------------------------------------------------------
..................................................GTGAGGAAAACGTGGTGGG.....................................................................................................................................................................................1911.001.00--------------------------------------------------------1.00-------------------------------
....................................AGGCCCGTAGAGAAGTGA....................................................................................................................................................................................................1811.001.00---------------------------------1.00------------------------------------------------------
.............................................................................GCGATCTGGTAGGCGGTGC..........................................................................................................................................................1911.001.001.00---------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................GTGTAGAAACGGGGACGAGGGTG.....2311.001.00------------1.00---------------------------------------------------------------------------
.........................................................................................................................TGCGCATGCCGACGCACGG..............................................................................................................1911.001.00--1.00-------------------------------------------------------------------------------------
........................................................................CATGCGCGATCTGGTAGGCG..............................................................................................................................................................2011.001.00-----------------------------1.00----------------------------------------------------------
................................................................................................................................................................................GTATGACCTGATCATTGC........................................................1811.001.00----1.00-----------------------------------------------------------------------------------
...........................................................................GCGCGATCTGGTAGGCGG.............................................................................................................................................................1811.001.001.00---------------------------------------------------------------------------------------
.........................................................................ATGCGCGATCTGGTAGGCGG.............................................................................................................................................................2011.001.00----------------------------------------------1.00-----------------------------------------
...................................................................................................................................................................................................................................GAAACGGGGACGAGGGTG.....1811.001.00-----------------------------------------------------1.00----------------------------------
.............................................................................................................ACCTGAGAGGCTTGCGCATGCCG......................................................................................................................2311.001.00-----------------------------------------------1.00----------------------------------------
.......................................................................................................................................................................................................................GGAGAGGGTGTAGAAACGG................1911.001.00---------------------------------------------------------------------------1.00------------
...........................................................................GCGCGATCTGGTAGGCGGTGCTGC.......................................................................................................................................................2411.001.00--------------------------1.00-------------------------------------------------------------
.........................................................................................................................................CGGATTCGAGGCGGGGAG...............................................................................................1811.001.00-----------------------------------------------------------------------------------1.00----
....................................................................................................GTCTGTTGTACCTGAGAG....................................................................................................................................1811.001.00---------------1.00------------------------------------------------------------------------
........................................................................................................................................ACGGATTCGAGGCGGGGAGCATGGGAAGA.....................................................................................2911.001.00--------------------------------------------------------------------1.00-------------------
....................................................................................................GTCTGTTGTACCTGAGAGGCTTGCGCATG.........................................................................................................................2911.001.00----------------------------------------------------------------------1.00-----------------
.........................................CGTAGAGAAGTGAGGAAAAC.............................................................................................................................................................................................2011.001.00----------------1.00-----------------------------------------------------------------------
...........................ATCTCAGGAAGGCCCGTAGA...........................................................................................................................................................................................................2011.001.00-----------------------------------------------------------------------1.00----------------
...................................................................................................................................................................................................................................GAAACGGGGACGAGGGTGGG...2011.001.00-------------------------------1.00--------------------------------------------------------
.....................................................................................................................................................................................ACCTGATCATTGCGACCAC..................................................1911.001.00------------1.00---------------------------------------------------------------------------
....................................................................................................................................................................................................................................AAACGGGGACGAGGGTGGG...1911.001.00----------------1.00-----------------------------------------------------------------------
...........................................................................................................................................................................................................TAGGGGAAGGGAGGAGAGGGTA.........................221.000.00-----------------------------------1.00----------------------------------------------------
.......................................................................................................TGTTGTACCTGAGAGGC..................................................................................................................................1711.001.00-1.00--------------------------------------------------------------------------------------
....................................................................................................GTCTGTTGTACCTGAGAGGCTTGCGC............................................................................................................................2611.001.00---------------------------------------1.00------------------------------------------------
..............................................................................................................................................................................................................................GTGTAGAAACGGGGACGAGGGT......2211.001.00------------------1.00---------------------------------------------------------------------
..........................................................................................................................................................................................................................GAGGGTGTAGAAACGGGGACGAGGGTGGGGGA3211.001.00--------------------------------------------------1.00-------------------------------------
.............................................................................................................................................................TGGGAAGAAGCGGCCAGGAG.........................................................................2011.001.00--------1.00-------------------------------------------------------------------------------
......................................................................................................CTGTTGTACCTGAGAGGC..................................................................................................................................1811.001.00--1.00-------------------------------------------------------------------------------------
................................................................................................................................................................................................................GAAGGGAGGAGAGGGTGTAGAAACGG................2611.001.00-----------------------------------------------------------1.00----------------------------
..............................................................................................................................................................................................................GGGAAGGGAGGAGAGGGTGTAGAAA...................2511.001.00------------------------------------------------------1.00---------------------------------
......................................................................................................................................................................................................................................ACGGGGACGAGGGTGGGGG.1911.001.00--------------------------------1.00-------------------------------------------------------
...........................................................................GCGCGATCTGGTAGGCGGT............................................................................................................................................................1911.001.00---------------------------------------------1.00------------------------------------------
............................................................................................................................................................................................CATTGCGACCACCGCTAGG...........................................1911.001.00---------------------------------------------------------------------1.00------------------
.............................CTCAGGAAGGCCCGTAGAGA.........................................................................................................................................................................................................2011.001.00------------------1.00---------------------------------------------------------------------
........................................................................................................................................................................................................................................GGGGACGAGGGTGGGGGACGGG221.000.00------------------------------------------------------------------------------1.00---------
.......................................................................................................................................CACGGATTCGAGGCGGGG.................................................................................................1811.001.00--------------------1.00-------------------------------------------------------------------
.............................................................................................TGCTGCCGTCTGTTGTACCTGAGAGGC..................................................................................................................................2711.001.00--------1.00-------------------------------------------------------------------------------
........................................................................................................GTTGTACCTGAGAGGCTTGCGCATG.........................................................................................................................2511.001.00------1.00---------------------------------------------------------------------------------
..........................................................AACGTGGTGGGGGGCATGCGCGATCCGG....................................................................................................................................................................281.000.00-----------1.00----------------------------------------------------------------------------
............................................................................................................................................................................................................AGGGGAAGGGAGGAGAGGGTG.........................2111.001.00-------1.00--------------------------------------------------------------------------------
...........................................................................................................................................................................................................TAGGGGAAGGGAGGAGAGGGTGTAG......................2511.001.00----------1.00-----------------------------------------------------------------------------
.......................................................................................................................................................................................................................................CGGGGACGAGGGTGGG...1611.001.00-------------------------------------------1.00--------------------------------------------
....................................................................................................................................................................................GACCTGATCATTGCGACCAC..................................................2011.001.00----1.00-----------------------------------------------------------------------------------
....................................................................................................................................................CGGGGAGCATGGGAAGAAT...................................................................................191.000.00------------------------------------------------------------1.00---------------------------
............................................................................................................................................................................AGGAGTATGACCTGATCATTGC........................................................2211.001.00------1.00---------------------------------------------------------------------------------
....................................................................................................................................................CGGGGAGCATGGGAAGAAGC..................................................................................2011.001.00----------------------------------------------------------------1.00-----------------------
.......................................................................................................................................................................................................................GGAGAGGGTGTAGAACTGG................191.000.00-------------------------------------------------------------1.00--------------------------
..................................................................................................CCGTCTGTTGTACCTGAGAGG...................................................................................................................................2111.001.00---------------1.00------------------------------------------------------------------------
.................................................................................................GCCGTCTGTTGTACCTGAG......................................................................................................................................1911.001.00---1.00------------------------------------------------------------------------------------
.................................................................................................................................................................AAGAAGCGGCCAGGAGTA.......................................................................1811.001.001.00---------------------------------------------------------------------------------------
...CGTGATTGGTGCAGGATCCTGC.................................................................................................................................................................................................................................2211.001.00-----------------------------------------1.00----------------------------------------------
..........................................................................TGCGCGATCTGGTAGGCG..............................................................................................................................................................1811.001.00-----------------1.00----------------------------------------------------------------------
...........................................................................GCGCGATCTGGTAGGCGGTGCT.........................................................................................................................................................2211.001.001.00---------------------------------------------------------------------------------------
.....................................................................................................................................................GGGGAGCATGGGAAGAAG...................................................................................1840.250.25--------0.25-------------------------------------------------------------------------------
...............................................................................................................................................................................................................GGAAGGGAGGAGAGGGTG.........................1840.250.25-------------------------0.25--------------------------------------------------------------

Antisense strand
GGCCGTGATTGGTGCAGGATCCTGCTAATCTCAGGAAGGCCCGTAGAGAAGTGAGGAAAACGTGGTGGGGGGCATGCGCGATCTGGTAGGCGGTGCTGCCGTCTGTTGTACCTGAGAGGCTTGCGCATGCCGACGCACGGATTCGAGGCGGGGAGCATGGGAAGAAGCGGCCAGGAGTATGACCTGATCATTGCGACCACCGCTAGGGGAAGGGAGGAGAGGGTGTAGAAACGGGGACGAGGGTGGGGGA
............................................................(((((((.....))).))))..(((.....))).............................................................................................................................................................
..................................................51..........................................95..........................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR040028(GSM532913)
G026N. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR037936(GSM510474)
293cand1. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040011(GSM532896)
G529T. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		TAX577589(Rovira)
total RNA. (breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR189785SRR040031(GSM532916)
G013T. (cervix)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532890(GSM532890)
G576T. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR029127(GSM416756)
A549. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR038859(GSM458542)
MM386. (cell line)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038857(GSM458540)
D20. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR038862(GSM458545)
MM472. (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.......................................................................................................................................................................................................ACCCTCTCCTCCCTTCCCCTAGCGG.......................... 2511.001.00---------------------------------------------------------1.00------------------------------
...................................................................................................................................GCCTCGAATCCGTGCGTC..................................................................................................... 1811.001.00-1.00--------------------------------------------------------------------------------------
.............................................................................................................................................................................................................GGGGAAGGGAGGAGAGGCGC......................... 201.000.00---------------------------------------------------------------------------------1.00------
........................................................................................................................................................................................................................TCCCCGTTTCTACACCCTCTC............. 2111.001.00---------1.00------------------------------------------------------------------------------
.................................................................................................................................CTCGAATCCGTGCGTCGG....................................................................................................... 1811.001.00--------------1.00-------------------------------------------------------------------------
.................................GGAAGGCCCGTAGAGCTG....................................................................................................................................................................................................... 181.000.00-------------------------------------------------------1.00--------------------------------
.................................................................................................GGTACAACAGACGGC.......................................................................................................................................... 1511.001.00------------------------------------------------1.00---------------------------------------
...................................................................................................................................................................TCAGGTCATACTCCTGGCCGCTTC............................................................... 2411.001.00------------------------------1.00---------------------------------------------------------
...........................................................................................GGTGCTGCCGTCTGTTGC............................................................................................................................................. 181.000.00----------------------------------------------------1.00-----------------------------------
...........................................................................................GGTGCTGCCGTCTGTTTG............................................................................................................................................. 181.000.00-------------------------------------------------------------------------------------1.00--
.........AGCAGGATCCTGCACCA................................................................................................................................................................................................................................ 1720.500.50-0.50--------------------------------------------------------------------------------------
..........................................................................................................................................................................................................TCTCCTCCCTTCCCCTAG.............................. 1840.250.25---------------------------------------------------------------------------------------0.25