ID: uc002qnj.2_intron_6_0_chr19_57061975_f.5p
GENE: (7)
chr19:57061925-57062174+


(1)
BRAIN
(2)
BREAST
(6)
CELL-LINE
(4)
HEART
(2)
LIVER
(5)
OTHER
(5)
SKIN

Sense strand
GAAGGAGCCCTGGATGGTGAAGCGAGAGCTGACAGGAAGCCTGTTCTCAGGTGAGTGCAGGAGAGCCTGGTGTGGAAAATCTACTGCAAGAGAGAGCGGAGCTTTTACCAAAAAGGCTGCATCCTCACTAATATACAGTAGGAAACTTTACCCAGGGTCTCTGGGTCTGGAAAGAAAATTGAACTCTGGGAGTTCCAAATAATTCTTTCCTCCTCCTTTGCCCCCTTCTCTCCAGTAACTGCCATTTCCC
...........................................................(((((.(((((.(((((...(((((((....((.(((.(((((((((.....)))))))...))))).))......)))))))....)))))))))).)))))........................................................................................
..................................................51................................................................................................................165...................................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR343335SRR343334GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189786TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
..............................................................................................................................................AAACTTTACCCAGGGGATG.........................................................................................1944.000.0031.009.004.00----------------------
..............................................................................................................................................AAACTTTACCCAGGGGAT..........................................................................................187.000.005.00-2.00----------------------
.............ATGGTGAAGCGAGAGGA............................................................................................................................................................................................................................171.000.00---------1.00---------------
...................................................TGAGTGCAGGAGAGCAAAA....................................................................................................................................................................................191.000.00-------1.00-----------------
...................................................TGAGTGCAGGAGAGCCTGGTG..................................................................................................................................................................................2111.001.00------1.00------------------
.........CTGGATGGTGAAGCGAGA...............................................................................................................................................................................................................................1811.001.00---1.00---------------------
..............................................................................................................................................AAACTTTACCCAGGGGACG.........................................................................................191.000.001.00------------------------
......................CGAGAGCTGACAGGAAGCCTGTTCTCA.........................................................................................................................................................................................................2711.001.00---------------1.00---------
.........................................................................................................................................................................................................................TTGCCCCCTTCTCTCCTCCT.............201.000.00-----1.00-------------------
..............................................................................................................................................AAACTTTACCCAGGGGAGG.........................................................................................191.000.001.00------------------------
.........................................................................................................................................................................................CTGGGAGTTCCAAATAATTCTTTCC........................................2511.001.00----------------1.00--------
................................................................................................................................TAATATACAGTAGGACATA.......................................................................................................191.000.00--------------1.00----------
.........................................................CAGGAGAGCCTGGTGTCTAG.............................................................................................................................................................................201.000.00-------------1.00-----------
...............................ACAGGAAGCCTGTTCTCAGGCGAG...................................................................................................................................................................................................241.000.00------------1.00------------
....GAGCCCTGGATGGTGAAG....................................................................................................................................................................................................................................1820.500.50-----------------0.50-------
...........................................................................................................................................................................AAGAAAATTGAACTCTG..............................................................1740.250.25-------------------0.25-----
.................................AGGAAGCCTGTTCTCAG........................................................................................................................................................................................................1760.170.17------------------------0.17
.................................................................................................................................AATATACAGTAGGAAA.........................................................................................................1660.170.17-----------------------0.17-
...............................................................................................................................CTAATATACAGTAGG............................................................................................................1560.170.17------------------0.17------

Antisense strand
GAAGGAGCCCTGGATGGTGAAGCGAGAGCTGACAGGAAGCCTGTTCTCAGGTGAGTGCAGGAGAGCCTGGTGTGGAAAATCTACTGCAAGAGAGAGCGGAGCTTTTACCAAAAAGGCTGCATCCTCACTAATATACAGTAGGAAACTTTACCCAGGGTCTCTGGGTCTGGAAAGAAAATTGAACTCTGGGAGTTCCAAATAATTCTTTCCTCCTCCTTTGCCCCCTTCTCTCCAGTAACTGCCATTTCCC
...........................................................(((((.(((((.(((((...(((((((....((.(((.(((((((((.....)))))))...))))).))......)))))))....)))))))))).)))))........................................................................................
..................................................51................................................................................................................165...................................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR343335SRR343334GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189786TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
....................AGCGAGAGCTGACAGGGC.................................................................................................................................................................................................................... 182.000.00----2.00--------------------
....................AGCGAGAGCTGACAGGAGGC.................................................................................................................................................................................................................. 201.000.00--------1.00----------------
.....................................................................................................................................................................................................................TCCTTTGCCCCCTTCATTT.................. 191.000.00----------1.00--------------
.............................................................................................................................................................................................................................CCCCTTCTCTCCAGTACCTG......... 201.000.00-----------1.00-------------
...........................................................................................................................................................................................................TCTTTCCTCCTCCTTTGGCAG.......................... 211.000.00---1.00---------------------
..................................................................................................................................................GAGACCCTGGGTAAA......................................................................................... 1550.600.60------------------0.20-0.200.20---
..................................................................................................................................................TTTACCCAGGGTCTCAAA...................................................................................... 180.200.00----------------------0.20--