ID: uc002qei.1_intron_8_0_chr19_54725252_r.5p
GENE: LILRB3(4)
chr19:54745252-54745501-


(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(2)
AGO2.ip 		(25)
B-CELL 		(8)
BRAIN 		(14)
BREAST 		(25)
CELL-LINE 		(8)
CERVIX 		(6)
HEART 		(1)
HELA 		(1)
KIDNEY 		(6)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(43)
SKIN 		(4)
UTERUS 		(1)
XRN.ip

Sense strand
CCCCCGGGTGTGGTCCCACCCCAGTGACCCCCTGGAGATTCTGCCCTCAGGTGAGGGAGCCACGGCCTTGTCTAACACACTTTCGGGGCAGCTGACAGGTTGTGGGGAGTTTGGCTGGTGACTGAATCTGGAAAGGACCCAGAGTGATGTGTTGAAGGACGGGCTGAAGGCATGAGGGAGACCCCATGGGGAGGCTCTGACATGGGAGGAGGAGCCCTTGACCACGTTCACCTGGAAGGGGAGGACTCAG
...................................................................................................((.((((...(((..((((.........))))..))).)))).))..........................................................................................................
................................................................................................97........................................................155.............................................................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR189784SRR189785SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR189782SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR343337SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189786SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR343336SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189787SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343335SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR343334RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015362(GSM380327)
NaÌøve B Cell (Naive138). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040011(GSM532896)
G529T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040016(GSM532901)
G645N. (cervix)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038863(GSM458546)
MM603. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		GSM532877(GSM532877)
G691N. (cervix)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR040010(GSM532895)
G529N. (cervix)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040029(GSM532914)
G026T. (cervix)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR191494(GSM715604)
157genomic small RNA (size selected RNA from . (breast)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191416(GSM715526)
34genomic small RNA (size selected RNA from t. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)		SRR038859(GSM458542)
MM386. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR038860(GSM458543)
MM426. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM532879(GSM532879)
G659N. (cervix)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040027(GSM532912)
G220T. (cervix)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
.....................................................................................................GTGGGGAGTTTGGCTGGGGCG................................................................................................................................214250.000.2526.0079.0026.0010.0010.0023.00-8.003.006.0010.009.001.001.00-3.00-2.004.001.002.00-1.002.003.00---1.003.00--3.001.00------1.001.00-----2.00---1.00-----------------1.00--------1.00--1.00------------------------------1.00----1.00-1.00---------1.00----------------------
.....................................................................................................GTGGGGAGTTTGGCTGGGG..................................................................................................................................194227.000.25177.007.003.00--2.002.004.002.007.003.002.00-1.004.00------------2.001.00----------------1.00---2.00----1.00--------1.00---------1.00------------------------1.00--------------------------------------1.00--1.001.00----------
.....................................................................................................GTGGGGAGTTTGGCTGGGGC.................................................................................................................................204185.000.2531.0047.0015.00--14.0011.00-8.0010.001.005.001.004.003.003.00---1.00---4.00----2.001.00--2.001.00---2.00----1.001.00-1.00------2.00----1.001.002.00--1.00-------1.00--------1.00--1.00----------1.00-1.001.00------------1.00-----------------1.00--------1.00---------------
.......................................................................................................GGGGAGTTTGGCTGGGGCG................................................................................................................................19174.000.00-9.0017.0039.0039.00--6.001.00-1.00--1.00-7.0015.007.003.002.004.00-1.00-1.00-1.00--2.00-----4.002.001.001.00--------1.00-1.00---------------1.001.00----1.00-----------------1.00------------1.00-------------1.00-----1.001.00----------------------------
......................................................................................................TGGGGAGTTTGGCTGGGGCG................................................................................................................................206143.000.176.0018.0022.009.009.006.006.0011.0010.00-3.001.00-8.001.001.001.003.00-1.00---1.003.00-4.00-1.00----2.002.00-2.00-2.00---1.001.00--3.00-------1.00------------1.00-----------------1.00-----------1.00----------------------1.00-------------------------------
.....................................................................................................GTGGGGAGTTTGGCTGGG...................................................................................................................................184114.000.25-19.008.001.001.001.0010.00-2.00-3.003.009.001.007.001.001.00-1.002.001.00------4.00--2.00--1.001.00--1.00-3.00-2.001.002.00-1.00--1.00--1.00-3.00-1.00-1.001.00---1.00--1.00-1.00--1.00--1.00------1.00-------------------1.001.00---1.00-1.00-----------------1.001.00----1.001.00-1.001.00-------1.00--------
.....................................................................................................GTGGGGAGTTTGGCTGGGGGG................................................................................................................................2145.000.25-1.00------------------------------1.00--------1.00---------------------------1.00----------------------------------------1.00-----------------------------------------
.....................................................................................................GTGGGGAGTTTGGCTGGGGCA................................................................................................................................2144.000.25-2.00-1.001.00---------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................TGGGGAGTTTGGCTGGGAC.................................................................................................................................1964.000.17--------1.00----3.00------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................GTGGGGAGTTTGGCTG.....................................................................................................................................1653.403.40----------0.40---0.20--------0.20----------0.20---0.20---------------------------------------0.60--0.20--------------------------------------------------------------0.600.40---0.200.20-
.....................................................................................................GTGGGGAGTTTGGCTGGTGC.................................................................................................................................203.000.00---1.001.00---------1.00-----------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................TGTGGGGAGTTTGGCTGGGGC.................................................................................................................................213.000.00-1.001.00-------------------------------1.00---------------------------------------------------------------------------------------------------------------------
.....................................................................................................GTGGGGAGTTTGGCTGGTGCG................................................................................................................................213.000.00--1.00-----------------------1.00-------------------------1.00---------------------------------------------------------------------------------------------------
......................................................................................................TGGGGAGTTTGGCTGGTGCGGC..............................................................................................................................222.000.00--2.00-----------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................TGTGGGGAGTTTGGCTGGGGCG................................................................................................................................222.000.00--1.00-------------------1.00---------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................GGGGAGTTTGGCTGGGGCC................................................................................................................................192.000.00---------------2.00----------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................GGAGTTTGGCTGGTGCGGC..............................................................................................................................192.000.00-----------------1.00--1.00-----------------------------------------------------------------------------------------------------------------------------------
......................................................................................................TGGGGAGTTTGGCTGGGGA.................................................................................................................................1962.000.17----------------------------------1.00---1.00-----------------------------------------------------------------------------------------------------------------
......................................................................................................TGGGGAGTTTGGCTGGTGCGG...............................................................................................................................212.000.00-1.00-----------1.00------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................GTGGGGAGTTTGGCTGGGGA.................................................................................................................................2042.000.25-1.00------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................GTGGGGAGTTTGGCTGAA...................................................................................................................................1852.003.40----------------------------2.00---------------------------------------------------------------------------------------------------------------------------
.......................................................................................................GGGGAGTTTGGCTGGCGGC................................................................................................................................192.000.00-1.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................GTGGGGAGTTTGGCTGGGGT.................................................................................................................................2042.000.251.00----1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................GGAGTTTGGCTGGTGCAA...............................................................................................................................182.000.00-------------------2.00------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................GTGGGGAGTTTGGCTGGGTC.................................................................................................................................2042.000.25--1.00------1.00----------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................TGGGGAGTTTGGCTGGGCCG................................................................................................................................2062.000.17---------------------------------------------------------------------------2.00----------------------------------------------------------------------------
......................................................................................................TGGGGAGTTTGGCTGGCAA.................................................................................................................................1962.000.17---1.001.00---------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................TGGGGAGTTTGGCTGGCG..................................................................................................................................1862.000.17--2.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................GGGGAGTTTGGCTGGGGTG................................................................................................................................192.000.00-----1.00-----------------------------1.00--------------------------------------------------------------------------------------------------------------------
......................................................................................................TGGGGAGTTTGGCTGGCGG.................................................................................................................................1962.000.17-----2.00--------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................GTGGGGAGTTTGGCTGGGGAG................................................................................................................................2142.000.25-2.00------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................TGGGGAGTTTGGCTGGGGCT................................................................................................................................2062.000.17--2.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................GTGGGGAGTTTGGCTGGTGGCA...............................................................................................................................221.000.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................GTGGGGAGTTTGGCTGTGGC.................................................................................................................................2051.003.40------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................TGGGGAGTTTGGCTGGTGCG................................................................................................................................201.000.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................GGGGAGTTTGGCTGGGGCT................................................................................................................................191.000.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................GGGGAGTTTGGCTGGGC..................................................................................................................................171.000.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................GTGGGGAGTTTGGCTGGTTCG................................................................................................................................211.000.00--------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................GTGGGGAGTTTGGCTGGGTCG................................................................................................................................2141.000.25-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................GTGGGGAGTTTGGCTGGGCCG................................................................................................................................2141.000.25-1.00------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................GTGGGGAGTTTGGCTGGTCGGC...............................................................................................................................221.000.00----------1.00---------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................GTGGGGAGTTTGGCTGGA...................................................................................................................................1841.000.25-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................GTGGGGAGTTTGGCTCGGG..................................................................................................................................191.000.00-1.00------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................GTGGGGAGTTTGGCTGGTGGTG...............................................................................................................................221.000.00----------------------------------------------------------------------------------------------------------------------1.00---------------------------------
.......................................................................................................GGGGAGTTTGGCTGGTGCAG...............................................................................................................................201.000.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................TGGGGAGTTTGGCTGGGA..................................................................................................................................1861.000.17--------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................TGGGGAGTTTGGCTGGTGGG................................................................................................................................201.000.00------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................GTGGGGAGTTTGGCTGGAG..................................................................................................................................1941.000.251.00-------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................GGGAGTTTGGCTGGTGCG................................................................................................................................181.000.00--------------------------------------------------------------------1.00-----------------------------------------------------------------------------------
........................................................................................................GGGAGTTTGGCTGGTGCGG...............................................................................................................................191.000.00---------------1.00----------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................GTGGGGAGTTTGGCTTGTG..................................................................................................................................191.000.00-----------------------------------------------------------------------1.00--------------------------------------------------------------------------------
.....................................................................................................GTGGGGAGTTTGGCTGGGGCT................................................................................................................................2141.000.25--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................TGGGGAGTTTGGCTGGGCG.................................................................................................................................1961.000.17--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................TGGGGAGTTTGGCTGGGGG.................................................................................................................................1961.000.17--------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................TGGGGAGTTTGGCTGGTGCGGA..............................................................................................................................221.000.00-1.00------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................TGGGGAGTTTGGCTGGTGGGCA..............................................................................................................................221.000.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................GGAAAGGACCCAGAGTGATGTG...................................................................................................2231.001.00------------------------------------------------------------------------------------------------------------1.00-------------------------------------------
.......................................................................................................GGGGAGTTTGGCTGGCGG.................................................................................................................................181.000.00------------------------------------------------------------------1.00-------------------------------------------------------------------------------------
.......................................................................................................GGGGAGTTTGGCTGGGCCG................................................................................................................................191.000.00------------------------------------------------------------------------------------1.00-------------------------------------------------------------------
.......................................................................................................GGGGAGTTTGGCTGGTGCGG...............................................................................................................................201.000.00------------------------------------1.00-------------------------------------------------------------------------------------------------------------------
......................................................................................................TGGGGAGTTTGGCTGGGGTG................................................................................................................................2061.000.17----------------------1.00---------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................GTGGGGAGTTTGGCTGGGCGG................................................................................................................................2141.000.25-----------------1.00--------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................TGGGGAGTTTGGCTGGCGCA................................................................................................................................2061.000.17------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................TGGGGAGTTTGGCTGGGC..................................................................................................................................1861.000.17---------------------------------------------------1.00----------------------------------------------------------------------------------------------------
........................................................................................................GGGAGTTTGGCTGGTGTGGC..............................................................................................................................201.000.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................GGGGAGTTTGGCTGGTGCGGC..............................................................................................................................211.000.00------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................GTGGGGAGTTTGGCTGGCGGC................................................................................................................................2141.000.25--------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
......................................................................................................TGGGGAGTTTGGCTGGGTAG................................................................................................................................2061.000.17-1.00------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................GTGGGGAGTTTGGCTGGGGTG................................................................................................................................2141.000.25-1.00------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................GGGGAGTTTGGCTGGGT..................................................................................................................................171.000.00-------------------------1.00------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................GTGGGGAGTTTGGCTGGGACG................................................................................................................................2141.000.25-1.00------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................AAGGACGGGCTGAAGGC...............................................................................1720.500.50---------------------0.50----------------------------------------------------------------------------------------------------------------------------------
...........................CCCCCTGGAGATTCTGCCCTC..........................................................................................................................................................................................................2130.330.33----------------------------------------------------------------------------------------------------------------------------------------------------0.33---
......................................................................................................TGGGGAGTTTGGCTGGTGA.................................................................................................................................1930.330.33--0.33-----------------------------------------------------------------------------------------------------------------------------------------------------
........................TGACCCCCTGGAGATTCTG...............................................................................................................................................................................................................1930.330.33--------------------------------------------------------------------------------------------------------------------------------------------------0.33-----
.....................................................................................................GTGGGGAGTTTGGCTGG....................................................................................................................................1740.250.25-------------------------------------0.25------------------------------------------------------------------------------------------------------------------
......................................................................................................TGGGGAGTTTGGCTGG....................................................................................................................................1660.170.17------------------------------------------------------0.17-------------------------------------------------------------------------------------------------
.........................................................................................................................CTGAATCTGGAAAGGA.................................................................................................................1670.140.14---------------------------------------------0.14----------------------------------------------------------------------------------------------------------

Antisense strand
CCCCCGGGTGTGGTCCCACCCCAGTGACCCCCTGGAGATTCTGCCCTCAGGTGAGGGAGCCACGGCCTTGTCTAACACACTTTCGGGGCAGCTGACAGGTTGTGGGGAGTTTGGCTGGTGACTGAATCTGGAAAGGACCCAGAGTGATGTGTTGAAGGACGGGCTGAAGGCATGAGGGAGACCCCATGGGGAGGCTCTGACATGGGAGGAGGAGCCCTTGACCACGTTCACCTGGAAGGGGAGGACTCAG
...................................................................................................((.((((...(((..((((.........))))..))).)))).))..........................................................................................................
................................................................................................97........................................................155.............................................................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR189784SRR189785SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR189782SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR343337SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189786SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR343336SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189787SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343335SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR343334RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015362(GSM380327)
NaÌøve B Cell (Naive138). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040011(GSM532896)
G529T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040016(GSM532901)
G645N. (cervix)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038863(GSM458546)
MM603. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		GSM532877(GSM532877)
G691N. (cervix)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR040010(GSM532895)
G529N. (cervix)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040029(GSM532914)
G026T. (cervix)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR191494(GSM715604)
157genomic small RNA (size selected RNA from . (breast)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191416(GSM715526)
34genomic small RNA (size selected RNA from t. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)		SRR038859(GSM458542)
MM386. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR038860(GSM458543)
MM426. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM532879(GSM532879)
G659N. (cervix)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040027(GSM532912)
G220T. (cervix)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
............................CCCCTGGAGATTCTGTACA........................................................................................................................................................................................................... 1940.000.00---------------------8.00-----1.00---5.00-1.00-----1.00--1.00-1.00-----1.00------------1.00--------2.00-2.00-2.00------1.00---1.001.00-1.00-1.00-1.00----1.00---1.00--1.00----1.00---1.00--------------1.00--------1.00--1.00---------
...........................CCCCCTGGAGATTCTAT.............................................................................................................................................................................................................. 1725.000.00------------6.00------------5.00----4.00---------3.00---------------2.00---1.00-------1.00----------------------1.00------------------------------------1.00----1.00------------------
............................CCCCTGGAGATTCTGTAAA........................................................................................................................................................................................................... 196.000.00------------------------------------------------1.00-2.00----------1.00------------------------1.00-----------------1.00-----------------------------------------------
............................CCCCTGGAGATTCTGCAC............................................................................................................................................................................................................ 185.000.00-----------1.00----------4.00---------------------------------------------------------------------------------------------------------------------------------
...........................CCCCCTGGAGATTCTACT............................................................................................................................................................................................................. 184.000.00------------1.00----------------------------------------------------------------1.00------------------------------------1.00---------1.00---------------------------
...........................CCCCCTGGAGATTCTATT............................................................................................................................................................................................................. 182.000.00-------------------------1.00----------------------------------1.00-------------------------------------------------------------------------------------------
......GGTGTGGTCCCACCCCAACA................................................................................................................................................................................................................................ 201.000.00----------------------------------------------------------------1.00---------------------------------------------------------------------------------------
...........................CCCCCTGGAGATTCTACAA............................................................................................................................................................................................................ 191.000.00------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
...........................CCCCCTGGAGATTCTGC.............................................................................................................................................................................................................. 171.000.00-------------------------------------------------------------------------------------------------------------------------1.00------------------------------
............................CCCCTGGAGATTCTGTCA............................................................................................................................................................................................................ 181.000.00-------------------------------------------------------------1.00------------------------------------------------------------------------------------------
............................CCCCTGGAGATTCTGTAAT........................................................................................................................................................................................................... 191.000.00-----------------------------------------------------------------------------------------------------------------1.00--------------------------------------
...........................CCCCCTGGAGATTCTAAT............................................................................................................................................................................................................. 181.000.00-------------------------------------------------------1.00------------------------------------------------------------------------------------------------
...........................CCCCCTGGAGATTCTGAC............................................................................................................................................................................................................. 181.000.00--------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
............................CCCCTGGAGATTCTGTTA............................................................................................................................................................................................................ 181.000.00--------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
............................CCCCTGGAGATTCTGTAGA........................................................................................................................................................................................................... 191.000.00------------------------------------------------1.00-------------------------------------------------------------------------------------------------------
...........................CCCCCTGGAGATTCTGACT............................................................................................................................................................................................................ 191.000.00-------------------------------1.00------------------------------------------------------------------------------------------------------------------------
...........................CCCCCTGGAGATTCTACG............................................................................................................................................................................................................. 181.000.00----------1.00---------------------------------------------------------------------------------------------------------------------------------------------
............................CCCCTGGAGATTCTGTACG........................................................................................................................................................................................................... 191.000.00------------------------------------------------------------------------------------------------------------------------------------------1.00-------------
...........................CCCCCTGGAGATTCTCC.............................................................................................................................................................................................................. 171.000.00-----------------------------------------------------------------------------1.00--------------------------------------------------------------------------
.....GGGTGTGGTCCCACCCCAC.................................................................................................................................................................................................................................. 191.000.00----------------------------------------------------------------1.00---------------------------------------------------------------------------------------
............................CCCCTGGAGATTCTGAACA........................................................................................................................................................................................................... 191.000.00--------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
................................................................CCCGAAAGTGTGTTAGACAAGGC................................................................................................................................................................... 2320.500.50-------------------------------------------------------------------------------0.50------------------------------------------------------------------------
..................................................AGACAAGGCCGTGGCTCCCTCAC................................................................................................................................................................................. 2330.330.33--------------------------------------------------------------------------------0.33-----------------------------------------------------------------------
..........................................................................................................................................................................CCCCATGGGGTCTCCCTCATG........................................................... 2130.330.33---------------------------------------------------------------------------------------------------------------------------------------------------0.33----
.................................................................................................................................................................................................CCTCCCATGTCAGAGC......................................... 1660.170.17-------------------------------------------------------------------------------------------------------------------------------------------------------0.17