ID: uc002qat.2_intron_1_0_chr19_53618561_r.5p
GENE: (3)
chr19:53619366-53619615-


(4)
B-CELL
(1)
BREAST
(5)
CELL-LINE
(5)
CERVIX
(1)
FIBROBLAST
(2)
HEART
(2)
HELA
(1)
KIDNEY
(4)
LIVER
(2)
OTHER
(6)
SKIN
(1)
TESTES

Sense strand
TTTATACAGGGATGTGATGTTGGAGAACTACAGGAACCTGGTCTCCCTGGGTGAGGATAATTTTCTTCCAGAAGTCAAAATCTGCCCTTGGTATCTTTCCATTTTCCCTTGTGTGCCTCTTGGGAGCCCCTGCATTACCTGACTGAGTTTGAGGCCTTGTTGACTCTGAAATGAAAAGCTCCATAATGTGAACTCTGGAGTTTAACCATCCCCTTTTTCCAGATTTTCTGACCCCTTCATGATACAACAG
.........................................................................................((((..........(((((.............))))).........)))).....(((((............)))))....................................................................................
...............................................................................80.......................................................................................169...............................................................................
SizePerfect hitTotal NormPerfect NormSRR040035(GSM532920)
G001T. (cervix)
SRR040037(GSM532922)
G243T. (cervix)
SRR040034(GSM532919)
G001N. (cervix)
SRR040036(GSM532921)
G243N. (cervix)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189782SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040038(GSM532923)
G531N. (cervix)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
GSM359178(GSM359178)
hela_nucl_t. (hela)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
..................................................................................................................................................GTTTGAGGCCTTGTTCCGA.....................................................................................1925.000.0017.005.002.00-----------1.00--------------------
..................................................................................................................................................GTTTGAGGCCTTGTTCCG......................................................................................1819.000.0011.005.002.001.00-------------------------------
..................................................................................................................................................GTTTGAGGCCTTGTTCCGC.....................................................................................193.000.003.00----------------------------------
....................................................................................CCCTTGGTATCTTTCCATTTT.................................................................................................................................................2113.003.00----2.001.00-----------------------------
..................................................................................................................................................GTTTGAGGCCTTGTTCCTA.....................................................................................191.000.00--1.00--------------------------------
.............GTGATGTTGGAGAACTCTG..........................................................................................................................................................................................................................191.000.00-----1.00-----------------------------
..................................................................................................................................................GTTTGAGGCCTTGTTCCTT.....................................................................................191.000.001.00----------------------------------
.....ACAGGGATGTGATGTTGGAGAACTTT...........................................................................................................................................................................................................................2681.000.12-------1.00---------------------------
...........ATGTGATGTTGGAGAACTCTG..........................................................................................................................................................................................................................211.000.00---------------1.00-------------------
.............................................................................................TCTTTCCATTTTCCCTTCCT.........................................................................................................................................201.000.00----------------1.00------------------
.................................................................................................................................................................GACTCTGAAATGAAAAGGCT.....................................................................201.000.00-------------1.00---------------------
.............................ACAGGAACCTGGTCTCCCTGGGAACC...................................................................................................................................................................................................2661.000.17------1.00----------------------------
.......AGGGATGTGATGTTGGAGT................................................................................................................................................................................................................................191.000.00-------------------1.00---------------
.........GGATGTGATGTTGGAGAATT.............................................................................................................................................................................................................................201.000.00------------------1.00----------------
.....ACAGGGATGTGATGTTGGAGAAT..............................................................................................................................................................................................................................2381.000.12--------1.00--------------------------
..................................................................................................................................................GTTTGAGGCCTTGTTCCGT.....................................................................................191.000.00-1.00---------------------------------
..................................................................................................................................................GTTTGAGGCCTTGTTCTGA.....................................................................................191.000.00---1.00-------------------------------
.......AGGGATGTGATGTTGGAGAACTACAGGA.......................................................................................................................................................................................................................2820.500.50---------------------0.50-------------
.......AGGGATGTGATGTTGGAGAACTACAGG........................................................................................................................................................................................................................2720.500.50--------------------0.50--------------
.....ACAGGGATGTGATGTTGGAG.................................................................................................................................................................................................................................2080.380.38-----------------------0.25--------0.12--
.TTATACAGGGATGTGATGT......................................................................................................................................................................................................................................1930.330.33----------------------0.33------------
.....ACAGGGATGTGATGTTGGAGA................................................................................................................................................................................................................................2180.250.25-------------------------0.25---------
....TACAGGGATGTGATGTTGGAGAACT.............................................................................................................................................................................................................................2580.250.25------------------------0.12------0.12---
..........GATGTGATGTTGGAGAACTACAGGA.......................................................................................................................................................................................................................2590.220.22--------------------------0.22--------
...................TTGGAGAACTACAGGAACCTGGTCTC.............................................................................................................................................................................................................2660.170.17---------------------------0.17-------
............................TACAGGAACCTGGTCTCCCTGGGT......................................................................................................................................................................................................2460.170.17----------------------------0.17------
.............................ACAGGAACCTGGTCTCCCTGGG.......................................................................................................................................................................................................2260.170.17------0.17----------------------------
..........................ACTACAGGAACCTGGTCTCCC...........................................................................................................................................................................................................2170.140.14-----------------------------0.14-----
..........................ACTACAGGAACCTGGTCTCC............................................................................................................................................................................................................2070.140.14------------------------------0.14----
......CAGGGATGTGATGTTGGAG.................................................................................................................................................................................................................................1980.120.12---------------------------------0.12-
..................GTTGGAGAACTACAGGAACCTGGTC...............................................................................................................................................................................................................2580.120.12------------------------0.12----------
.....ACAGGGATGTGATGTTGGAGAA...............................................................................................................................................................................................................................2280.120.12----------------------------------0.12
....TACAGGGATGTGATGTTGGAG.................................................................................................................................................................................................................................2180.120.12--------------------0.12--------------
.....ACAGGGATGTGATGTTGGAGAACT.............................................................................................................................................................................................................................2480.120.12--------------------0.12--------------

Antisense strand
TTTATACAGGGATGTGATGTTGGAGAACTACAGGAACCTGGTCTCCCTGGGTGAGGATAATTTTCTTCCAGAAGTCAAAATCTGCCCTTGGTATCTTTCCATTTTCCCTTGTGTGCCTCTTGGGAGCCCCTGCATTACCTGACTGAGTTTGAGGCCTTGTTGACTCTGAAATGAAAAGCTCCATAATGTGAACTCTGGAGTTTAACCATCCCCTTTTTCCAGATTTTCTGACCCCTTCATGATACAACAG
.........................................................................................((((..........(((((.............))))).........)))).....(((((............)))))....................................................................................
...............................................................................80.......................................................................................169...............................................................................
SizePerfect hitTotal NormPerfect NormSRR040035(GSM532920)
G001T. (cervix)
SRR040037(GSM532922)
G243T. (cervix)
SRR040034(GSM532919)
G001N. (cervix)
SRR040036(GSM532921)
G243N. (cervix)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189782SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040038(GSM532923)
G531N. (cervix)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
GSM359178(GSM359178)
hela_nucl_t. (hela)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
................................................................................................................................CCTGCATTACCTGACATAG....................................................................................................... 191.000.00------------1.00----------------------
.................................GAACCTGGTCTCCCTTATA...................................................................................................................................................................................................... 191.000.00-----------1.00-----------------------
...................................................................................................................................................TTTGAGGCCTTGTTGGG...................................................................................... 171.000.00----------1.00------------------------
..................................................................................................CCATTTTCCCTTGTGTGTAA.................................................................................................................................... 201.000.001.00----------------------------------
..........................................................................................................................................CAGAGTCAACAAGGCCTCAAACTCAGTCAG.................................................................................. 3011.001.00-----------------1.00-----------------
..............TGATGTTGGAGAACTACAGGATA..................................................................................................................................................................................................................... 231.000.00---------1.00-------------------------