ID: uc002pyi.3_intron_4_0_chr19_52529215_r.3p
GENE: (1)
chr19:52529165-52529414-


(6)
BREAST
(10)
CELL-LINE
(1)
CERVIX
(1)
OTHER
(3)
SKIN

Sense strand
TCTCTATAATAGTCATGCCACTTCTACTTCACAAAAGAAAGGCATAGATTTCACACATTTAGAACCATGAAAACCTCTGAGGCAGCAAATAAAGGAACTGTTAGAAATATTAGGGTCTTTTATTTAAGGTAAGTGCAGAGCAGCAGTGACAATGTCTGGACCCAGGGTTAATGTACACTGAAAGCCATTTTGTTTATCAGTCCTCAGGTCCTGGCTCCCAGAAGCAAAATAACTCAAGTGAAGCAATGAA
.................................................................................................(((.((....)).)))..............(((...(((...))).((((((((.((((((....))))..)).))).)))))...)))................................................................
................................................................................................97..........................................................................................189...........................................................
SizePerfect hitTotal NormPerfect NormSRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR189782SRR037937(GSM510475)
293cand2. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)
GSM532886(GSM532886)
G850T. (cervix)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.....................................................................................................TAGAAATATTAGGGTCGAGG.................................................................................................................................2059.000.0017.0034.001.00-2.00-2.003.00-------------
.....................................................................................................TAGAAATATTAGGGTCGA...................................................................................................................................1833.000.0014.00-15.00-3.001.00---------------
.....................................................................................................TAGAAATATTAGGGTCGAG..................................................................................................................................1914.000.009.00-1.00-3.00-1.00--------------
....................................................................................................TTAGAAATATTAGGGTCGAGG.................................................................................................................................2110.000.002.008.00-------------------
......................................................................................................AGAAATATTAGGGTCGATC.................................................................................................................................197.000.00---7.00-----------------
.....................................................................................................TAGAAATATTAGGGTCGATC.................................................................................................................................204.000.00---4.00-----------------
......................................................................................................AGAAATATTAGGGTCGAGG.................................................................................................................................193.000.001.00---1.00-1.00--------------
......................................................................................................AGAAATATTAGGGTCG....................................................................................................................................163.000.00-----3.00---------------
....................................................................................................TTAGAAATATTAGGGTCGAG..................................................................................................................................201.000.00----1.00----------------
......................................................................................................................................................................................................................CTCCCAGAAGCAAAATAA..................1811.001.00------------1.00--------
....................................................................................................................................................................GGGTTAATGTACACTGAAAGC.................................................................2111.001.00------------------1.00--
....................................................................................................................................................................................................TCAGTCCTCAGGTCCGACT...................................191.000.00---------------1.00-----
.....................................................................................................TAGAAATATTAGGGTCGC...................................................................................................................................181.000.00--------1.00------------
.....................................................................................................................................................................GGTTAATGTACACTGAAT...................................................................181.000.00-----------1.00---------
......................................................................................................................................................AATGTCTGGACCCAGT....................................................................................161.000.00-------------1.00-------
......................................................................................................AGAAATATTAGGGTCGC...................................................................................................................................171.000.00----1.00----------------
.............................................................................................................................AAGGTAAGTGCAGAGCAGCAGTG......................................................................................................2311.001.00---------1.00-----------
......................................................................................AAATAAAGGAACTGTTAGA.................................................................................................................................................1930.330.33-------------------0.33-

Antisense strand
TCTCTATAATAGTCATGCCACTTCTACTTCACAAAAGAAAGGCATAGATTTCACACATTTAGAACCATGAAAACCTCTGAGGCAGCAAATAAAGGAACTGTTAGAAATATTAGGGTCTTTTATTTAAGGTAAGTGCAGAGCAGCAGTGACAATGTCTGGACCCAGGGTTAATGTACACTGAAAGCCATTTTGTTTATCAGTCCTCAGGTCCTGGCTCCCAGAAGCAAAATAACTCAAGTGAAGCAATGAA
.................................................................................................(((.((....)).)))..............(((...(((...))).((((((((.((((((....))))..)).))).)))))...)))................................................................
................................................................................................97..........................................................................................189...........................................................
SizePerfect hitTotal NormPerfect NormSRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR189782SRR037937(GSM510475)
293cand2. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)
GSM532886(GSM532886)
G850T. (cervix)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...................................................................................................................................................................................GAAAGCCATTTTGTTTCA..................................................... 182.000.00----------------1.001.00---
...................................................................................................................................................................................GAAAGCCATTTTGTTTCAC.................................................... 191.000.00--------------1.00------
.................................................................................GCAGCAAATAAAGGAATCC...................................................................................................................................................... 191.000.00----------1.00----------
.................................................................................................................................................................................................................................TCACTTGAGTTATTTT......... 1650.200.20--------------------0.20