ID: uc002pwg.2_intron_3_0_chr19_51856545_r.3p
GENE: (1)
chr19:51856495-51856744-


(1)
AGO2.ip
(4)
B-CELL
(2)
BRAIN
(3)
BREAST
(5)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(2)
HEART
(3)
LIVER
(1)
OTHER
(7)
SKIN

Sense strand
TCCTGGGTCTGAGGAAGGAGGGGATGGGGGCCCGGACTCCTGGGTCTGAGGAAGGAGGGGATGGGGGCCTGGACTCCTGGGTCTGAGGAAGGAGGGGATGGGGCCCTGGACTCCTGGGTCTGAGGAAGGAGGGGCTGCGAGCCAGACTCCTAGGTCCCCCTGAGGATAGCAGCCAAGTCAAGCCCCTCTGTCCTTGGCAGGAGACGATTCGTACCGCCCTGGCCATGGGTGCAGACCGAGGTATCCACGT
.................................................................................(((.(((.((((((((......)))....)))))...))).))).............................................................................................................................
................................................................................81.....................................................136................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189785SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189784SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189782SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR040035(GSM532920)
G001T. (cervix)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
TAX577590(Rovira)
total RNA. (breast)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577738(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...............................................GAGGAAGGAGGGGATGATG........................................................................................................................................................................................1936.000.009.009.00----6.003.00--3.00-3.00-------3.00------------
.....................................................................................AGGAAGGAGGGGATGATGT..................................................................................................................................................1921.000.00--9.003.00---------3.00----3.003.00-------------
....................................................................................GAGGAAGGAGGGGATGATGT..................................................................................................................................................209.000.003.003.00-----3.00-------------------------
.....................................................................................AGGAAGGAGGGGATGACGT..................................................................................................................................................196.000.00---3.003.00----------------------------
.........TGAGGAAGGAGGGGATGATG.............................................................................................................................................................................................................................206.000.00---3.00-----------3.00-----------------
..............................................TGAGGAAGGAGGGGATGATGT.......................................................................................................................................................................................216.000.00-----6.00---------------------------
.................................................................................................................CTGGGTCTGAGGAAGGAGG......................................................................................................................1904.004.00---------4.00-----------------------
......................................................................................................................................................................................................AGGAGACGATTCGTACCGCCCT..............................2213.003.00--------3.00------------------------
................................................AGGAAGGAGGGGATGACG........................................................................................................................................................................................183.000.00----3.00----------------------------
..............................................TGAGGAAGGAGGGGATGACG........................................................................................................................................................................................203.000.00-----------3.00---------------------
..........GAGGAAGGAGGGGATGACG.............................................................................................................................................................................................................................193.000.00----------------------3.00----------
..........GAGGAAGGAGGGGATGACGA............................................................................................................................................................................................................................203.000.00----------------3.00----------------
.......................................................................................GAAGGAGGGGATGGGTACA................................................................................................................................................193.000.00---------------------3.00-----------
................................................AGGAAGGAGGGGATGACAA.......................................................................................................................................................................................193.000.00--------------3.00------------------
.........TGAGGAAGGAGGGGATGACGT............................................................................................................................................................................................................................213.000.00-----------------3.00---------------
.......................................................................................................................................................................................................GGAGACGATTCGTACCGCCTT..............................211.000.00--------1.00------------------------
................................................................................................................................................................................................................TCGTACCGCCCTGGC...........................1511.001.00----------------------------1.00----
...............AGGAGGGGATGGGGGCCCTTTC.....................................................................................................................................................................................................................221.000.00-------------------------1.00-------
......................................................................................................................................................................................................AGGAGACGATTCGTACCGTC................................201.000.00--------1.00------------------------
........................................................................................................................................................................................................GAGACGATTCGTACCGCCC...............................1911.001.00----1.00----------------------------
..............................................................................................................................AGGAGGGGCTGCGAGCCCT.........................................................................................................191.000.00-----------------------1.00---------
...................................................................................................................................................................................AAGCCCCTCTGTCCTTGGCA...................................................2020.500.50-----------------------------0.50---
...........................................................................................................................................................CCCCCTGAGGATAGCAG..............................................................................1720.500.50------------------------------0.50--
.............................................................................TGGGTCTGAGGAAGGAGGGGATGGGGCCCTG..............................................................................................................................................3130.330.33-------------------------------0.33-
.............................GCCCGGACTCCTGGGTCTGAGGAAGGAGGGG..............................................................................................................................................................................................3160.170.17-------------------------------0.17-

Antisense strand
TCCTGGGTCTGAGGAAGGAGGGGATGGGGGCCCGGACTCCTGGGTCTGAGGAAGGAGGGGATGGGGGCCTGGACTCCTGGGTCTGAGGAAGGAGGGGATGGGGCCCTGGACTCCTGGGTCTGAGGAAGGAGGGGCTGCGAGCCAGACTCCTAGGTCCCCCTGAGGATAGCAGCCAAGTCAAGCCCCTCTGTCCTTGGCAGGAGACGATTCGTACCGCCCTGGCCATGGGTGCAGACCGAGGTATCCACGT
.................................................................................(((.(((.((((((((......)))....)))))...))).))).............................................................................................................................
................................................................................81.....................................................136................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189785SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189784SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189782SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR040035(GSM532920)
G001T. (cervix)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
TAX577590(Rovira)
total RNA. (breast)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577738(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.......................................................................................................CCCTGGACTCCTGGGTT.................................................................................................................................. 171.000.00---------------------------1.00-----
.............................................................................................................................AAGGAGGGGCTGCGATTTT.......................................................................................................... 191.000.00--------------------------1.00------
..............................................................................................................................AGGAGGGGCTGCGAGGGTT......................................................................................................... 191.000.00------------------------1.00--------
......................................................................................................................................................................................TGCCAAGGACAGAGGGG................................................... 1730.330.33--------------------------------0.33