ID: uc002pmr.2_intron_27_0_chr19_49652976_f
GENE: (28)
chr19:49652926-49653386+


(1)
AGO2.ip
(3)
B-CELL
(2)
BRAIN
(12)
BREAST
(21)
CELL-LINE
(5)
CERVIX
(2)
HEART
(2)
HELA
(1)
KIDNEY
(2)
LIVER
(1)
OTHER
(1)
RRP40.ip
(28)
SKIN
(1)
UTERUS
(1)
XRN.ip

Sense strand
GGGAGCCCTGGGCTCTCCGGGGCTCCCTCTCCGCAAGCTGCAGCCAGAAGGTGGGGGGCTCCCAAATGCGACAGCCCTTCCTCGCTTCCCTAGGGTGGGGCATGGACCACCTCAGTAGTCCGGGTTCTGGAATGGCCTAGTCCTTTCTCGCCCACCCCTGAGGAATGGACTGCTCCAACGTTCCGGACTCCCCCGTCAGGATGAAATGGATAAATCCCACTCCCCCTTCCCAGGGCGGGAGTGAACTCGCCCAATGCGAGTTTGAGTCCTTGGCTGCGGGGAAGGGAGGGAAACCCATGTGGAGCCCGGCGATCGTTGTGACATCGGGAAGGGAAGTCCAAAGGGAGGAATCCTGGAGAGGAACAGGGAGGAGGGTGCTCCAGGCTGAACCGCTGCTCGCTCTCCCTCCAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGGACCTAT
...............................................................................................................................................................................................................................................................................................((....))....((((.(((..((((.((....))))))....)))...)))).........................................................................................................................
..............................................................................................................................................................................................................................................................................................287...................................................341......................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040028(GSM532913)
G026N. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR040035(GSM532920)
G001T. (cervix)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR029125(GSM416754)
U2OS. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR037935(GSM510473)
293cand3. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189783SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR189782SRR037937(GSM510475)
293cand2. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR040031(GSM532916)
G013T. (cervix)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR040008(GSM532893)
G727N. (cervix)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577741(Rovira)
total RNA. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR038860(GSM458543)
MM426. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR553575(SRX182781)
source: Kidney. (Kidney)
...................................................................................................................................................................................................................................................................................................AACCCATGTGGAGCCCGGA.......................................................................................................................................................1916.001.006.00----------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................GACATCGGGAAGGGAAGT............................................................................................................................1815.005.003.00-----------------2.00----------------------------------------------------------------
.............................................................................................................................................................................................................................................................................TTGGCTGCGGGGAAGGGAGGG...........................................................................................................................................................................2113.003.00-------1.00----------------------1.00---------------------------1.00------------------------
..................................................................................................................................................................................................................................................................................................................CGGCGATCGTTGTGACAT.........................................................................................................................................1813.003.00--2.00-----------------------------------------------------1.00--------------------------
.......................................................................................................................................................................................................................................................................................................CATGTGGAGCCCGGCGATCGTTGTGA............................................................................................................................................2612.002.00-2.00---------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................CCCGGCGATCGTTGTGACATC........................................................................................................................................2112.002.00------------------------------------1.00-1.00--------------------------------------------
.................................................................................................................................................................................................................................................................................................GAAACCCATGTGGAGCCCGGC.......................................................................................................................................................2112.002.00---------------------2.00-------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................TTGTGACATCGGGAAGGGAAGT............................................................................................................................2212.002.00------2.00----------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................GGAGGAATCCTGGAGAGGAAC.................................................................................................2112.002.00--------------------2.00--------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................CGGCGATCGTTGTGACATC........................................................................................................................................1912.002.00--------------1.00------------------------------------1.00-------------------------------
....................................................................................................................................................................................................................................................................................................ACCCATGTGGAGCCCGGC.......................................................................................................................................................1812.002.00---------1.00---------------------------------------------------1.00---------------------
................................................................................................................................................................................................................................................................................................................CCCGGCGATCGTTGTGACAT.........................................................................................................................................2011.001.00----------------1.00------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................CCCGGCGATCGTTGTGACATCGG......................................................................................................................................2311.001.00----------------------------------------------------------------------1.00------------
..................................................................................................................................................................................................................................................................................................................CGGCGATCGTTGTGACATCGGGAAG..................................................................................................................................2511.001.00-----------------------------------1.00-----------------------------------------------
..............................................................................................................................................................................................................................................................................................AGGGAAACCCATGTGGA..............................................................................................................................................................1711.001.00---------1.00-------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................GAGGAACAGGGAGGAGGGTG....................................................................................2011.001.00-------------------------1.00---------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................GGAATCCTGGAGAGGCTAA................................................................................................191.000.00-----------------------------------------------------------------------1.00-----------
...................................................................................................................................................................................................................................................................................................AACCCATGTGGAGCCCGGC.......................................................................................................................................................1911.001.001.00----------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................CGTTGTGACATCGGGAAGGGAAG.............................................................................................................................2311.001.00----------------------------------------------------------------1.00------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGGAGTTCCCGGGCAGCTAA...................231.000.00-----------------1.00-----------------------------------------------------------------
................................................................................................................CAGTAGTCCGGGTTCTGGAATGGC.....................................................................................................................................................................................................................................................................................................................................2411.001.00--------------------------------------------------------------------1.00--------------
................................................................................................................................................................................................................................................................................................................................................................................AGGAGGGTGCTCCAGGCACC.........................................................................201.000.00--------------------------1.00--------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGGA.....3611.001.00---------------------------1.00-------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................GTTGTGACATCGGGAAGGGAAGT............................................................................................................................2311.001.00-1.00---------------------------------------------------------------------------------
........................................................................................................................CGGGTTCTGGAATGGCCTAGTCCT.............................................................................................................................................................................................................................................................................................................................2411.001.00-----------------------------------------------------------1.00-----------------------
...........................................................................................................................................................................................................................................................................................................TGGAGCCCGGCGATC...................................................................................................................................................1511.001.00----------------------------------------1.00------------------------------------------
...................................................................................................................................................................................................................................................................................................AACCCATGTGGAGCCCGG........................................................................................................................................................1811.001.00---------------------------------1.00-------------------------------------------------
.............................................................................................................................................................................................................................................................................................................GAGCCCGGCGATCGTTG...............................................................................................................................................1711.001.00----1.00------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................TGGAGAGGAACAGGGAGGAGGGT.....................................................................................2311.001.00-----------------------------------------1.00-----------------------------------------
........TGGGCTCTCCGGGGCTGGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00-----------------1.00-----------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................ACCCATGTGGAGCCCGGCGATCG..................................................................................................................................................2311.001.00----------------------------------1.00------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................GTTGTGACATCGGGAAGGGA...............................................................................................................................2011.001.00---1.00-------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................CCCATGTGGAGCCCGGCGATC...................................................................................................................................................2111.001.00-----1.00-----------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................ATGTGGAGCCCGGCGATCGTTGTG.............................................................................................................................................2411.001.00----1.00------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................TGGCTGCGGGGAAGGGAGGG...........................................................................................................................................................................2011.001.00-------1.00---------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................ATCGTTGTGACATCGGGAAGGG................................................................................................................................2211.001.00-------------------------------------------------------------------1.00---------------
.............................................................................................................................................................................................................................................................................................................GAGCCCGGCGATCGTTGTG.............................................................................................................................................1911.001.00----------------------------------------------------1.00------------------------------
.............................................................................................................................................................................................................................................................................TTGGCTGCGGGGAAGGGAGGGTA.........................................................................................................................................................................2311.003.00-------------------1.00---------------------------------------------------------------
...................................................................................................................................................................................................................................................................................GCGGGGAAGGGAGGGAAACC......................................................................................................................................................................2011.001.00---------------------------------------------------------------1.00-------------------
................................................................................................................................................................................................................................................................................................................CCCGGCGATCGTTGTGACA..........................................................................................................................................1911.001.001.00----------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................GAAACCCATGTGGAGCCCGGCG......................................................................................................................................................2211.001.00----------------------------------------------1.00------------------------------------
.................................................................................................................................................................................................................................................................................................................CCGGCGATCGTTGTGACATCG.......................................................................................................................................2111.001.00-------------1.00---------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................CGGCGATCGTTGTGAC...........................................................................................................................................1611.001.00--1.00--------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................AGAGGAACAGGGAGGAGGGT.....................................................................................2011.001.00-------------------------------------1.00---------------------------------------------
......................................................................................................................TCCGGGTTCTGGAATGG......................................................................................................................................................................................................................................................................................................................................1711.001.00------------------------------------------------------------1.00----------------------
..........................................................................................................................................................................................................................................................................................................GTGGAGCCCGGCGATCGTTGTGA............................................................................................................................................2311.001.00-1.00---------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................CGGGGAAGGGAGGGACGG.......................................................................................................................................................................181.000.00-------------------------------1.00---------------------------------------------------
.......................TCCCTCTCCGCAAGCTGCAGCCAGAA............................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00-----------------------------------------------------1.00-----------------------------
......................................................................................................................................................................................................................................................................................................CCATGTGGAGCCCGGCGATCGA.................................................................................................................................................221.000.00------1.00----------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................CCCGGCGATCGTTGTGA............................................................................................................................................1711.001.00-----1.00-----------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................ATCCTGGAGAGGAACAGGGAGGAGGGTG....................................................................................2811.001.00------------------------------------------------------1.00----------------------------
..........................................................................................................................................................................................................................................................................................................................................................................ACAGGGAGGAGGGTGTATA................................................................................191.000.00----1.00------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCCGGGCAGACGGCGTTT..............2111.001.00--------------------------------------------------1.00--------------------------------
..................................................................................................................................................................................................GTCAGGATGAAATGGAAGCA.......................................................................................................................................................................................................................................................201.000.00-1.00---------------------------------------------------------------------------------
............................................................................................................................................TCCTTTCTCGCCCACCCCTGAGG..........................................................................................................................................................................................................................................................................................................2311.001.00-------------------1.00---------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGGGCAGACGGCGTTTCGGTCC........2411.001.00----------1.00------------------------------------------------------------------------
.............................................................................................GGTGGGGCATGGACCACTG.............................................................................................................................................................................................................................................................................................................................................................191.000.00---------------------------------------1.00-------------------------------------------
.................................................................................................................................................................................................................................................................................................................CCGGCGATCGTTGTGACATC........................................................................................................................................2011.001.00----------------------------1.00------------------------------------------------------
............................................................................................................................................................CCTGAGGAATGGACTGC................................................................................................................................................................................................................................................................................................1711.001.00-----------1.00-----------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................GGAGCCCGGCGATCGTTGTGACATCGGGA....................................................................................................................................2911.001.00------------------------1.00----------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................GAGCCCGGCGATCGTTGTGA............................................................................................................................................2011.001.00-------------------------------------------------------1.00---------------------------
....................................................................................................................................................................................................................................................................................................ACCCATGTGGAGCCCGGCGATCGTT................................................................................................................................................2511.001.00-------------1.00---------------------------------------------------------------------
.........................................................................................................................GGGTTCTGGAATGGCCTAGTCCTTTC..........................................................................................................................................................................................................................................................................................................................2611.001.001.00----------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................GGGAAACCCATGTGGGGCC...........................................................................................................................................................191.000.00------------------------------------------------1.00----------------------------------
........................................................................................................................................................................................................................................................................................................................................................................GAACAGGGAGGAGGGTGCTCCAGGCTGA.........................................................................2811.001.00------------------------------------------1.00----------------------------------------
..................................................................................................................................................................................................................................................................................................................CGGCGATCGTTGTGACATCGGGAAGGGAA..............................................................................................................................2911.001.00----------------------1.00------------------------------------------------------------
.................................................................................................................................................................................................................................................................................CTGCGGGGAAGGGAGGGA..........................................................................................................................................................................1820.500.50----------------------0.50------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................TTGTGACATCGGGAA...................................................................................................................................1520.500.50-------------------------------------------------------------------------0.50---------
.......................................................................................................................................................................................................................................................................................................CATGTGGAGCCCGGC.......................................................................................................................................................1540.250.25----------------------------------------------------------------------------0.25------

Antisense strand
GGGAGCCCTGGGCTCTCCGGGGCTCCCTCTCCGCAAGCTGCAGCCAGAAGGTGGGGGGCTCCCAAATGCGACAGCCCTTCCTCGCTTCCCTAGGGTGGGGCATGGACCACCTCAGTAGTCCGGGTTCTGGAATGGCCTAGTCCTTTCTCGCCCACCCCTGAGGAATGGACTGCTCCAACGTTCCGGACTCCCCCGTCAGGATGAAATGGATAAATCCCACTCCCCCTTCCCAGGGCGGGAGTGAACTCGCCCAATGCGAGTTTGAGTCCTTGGCTGCGGGGAAGGGAGGGAAACCCATGTGGAGCCCGGCGATCGTTGTGACATCGGGAAGGGAAGTCCAAAGGGAGGAATCCTGGAGAGGAACAGGGAGGAGGGTGCTCCAGGCTGAACCGCTGCTCGCTCTCCCTCCAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCGGTCCGGACCTAT
...............................................................................................................................................................................................................................................................................................((....))....((((.(((..((((.((....))))))....)))...)))).........................................................................................................................
..............................................................................................................................................................................................................................................................................................287...................................................341......................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040028(GSM532913)
G026N. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR040035(GSM532920)
G001T. (cervix)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR029125(GSM416754)
U2OS. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR037935(GSM510473)
293cand3. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189783SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR189782SRR037937(GSM510475)
293cand2. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR040031(GSM532916)
G013T. (cervix)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR040008(GSM532893)
G727N. (cervix)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577741(Rovira)
total RNA. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR038860(GSM458543)
MM426. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR553575(SRX182781)
source: Kidney. (Kidney)
...........................................................................................................................................................................................................................................................................................................................................................................................................CTCGCTCTCCCTCCAGGC................................................ 182.000.00---2.00-------------------------------------------------------------------------------
...................................................................................................................CTAGGCCATTCCAGAACCCGGACTA................................................................................................................................................................................................................................................................................................................................. 2512.002.00---------------2.00-------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................GATGTCACAACGATCGCCGG........................................................................................................................................ 2012.002.00------------2.00----------------------------------------------------------------------
............CTCTCCGGGGCTCCCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................ 172.000.00-----------------------1.00--------1.00--------------------------------------------------
..........................................................................................................................................................................................................................................................................................................GTGGAGCCCGGCGATCCAT................................................................................................................................................ 191.000.00--------------------------------------------1.00--------------------------------------
...................................................................GCGACAGCCCTTCCTTC......................................................................................................................................................................................................................................................................................................................................................................................... 171.000.00----------1.00------------------------------------------------------------------------
.......................TGGCTGCAGCTTGCGGAGAGGGA............................................................................................................................................................................................................................................................................................................................................................................................................................... 2311.001.00---------------------------------------------------------------------1.00-------------
......................CTCCCTCTCCGCAAGCTGCAGCCAA.............................................................................................................................................................................................................................................................................................................................................................................................................................. 251.000.00---------------------------------------------------------1.00-------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................TGCTCGCTCTCCCTCACAG................................................. 191.000.00--------1.00--------------------------------------------------------------------------
................CCGGGGCTCCCTCTCCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00------------------------------------------------------------------1.00----------------
......CCTGGGCTCTCCGGGGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00--------------------------------------------------------------1.00--------------------
............................................................................CTTCCTCGCTTCCCTAAC............................................................................................................................................................................................................................................................................................................................................................................... 181.000.00-----1.00-----------------------------------------------------------------------------
.......CTGGGCTCTCCGGGGTCGG................................................................................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00-----------------------------1.00-----------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTTTCGGTCCGGAACGC. 201.000.00-------------------------------------------1.00---------------------------------------
.................................................................................................................................................................................................................................................................................................................TCACAACGATCGCCGG............................................................................................................................................ 1611.001.00-----------1.00-----------------------------------------------------------------------
...................GGGCTCCCTCTCCGCATTC....................................................................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00---------------------------------------------1.00-------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................TGCTCGCTCTCCCTCAGAG................................................. 191.000.00--------1.00--------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................CCAGAAGTCTGGCCTGGAGGGAG..................................... 2311.001.00--------------1.00--------------------------------------------------------------------
.......CTGGGCTCTCCGGGGCGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00----------------1.00------------------------------------------------------------------
...........GAGAGGGAGCCCCGGAGAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................. 2011.001.00-------------------------------------------------1.00---------------------------------
.....................CACCTTCTGGCTGCAGCTTGCGGAGAGGGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................ 3211.001.00-----------------------------------------------------------------1.00-----------------
.....................................................................................................................................................................................................................................................AAGGACTCAAACTCGCATTGGGCGAG.............................................................................................................................................................................................. 2611.001.00-1.00---------------------------------------------------------------------------------
......................................................................................................................................................................................................................TCCCACTCCCCCTTCCCGG.................................................................................................................................................................................................................................... 191.000.00-----------------------------------------------1.00-----------------------------------
....................GGCTCCCTCTCCGCAATGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................... 200.500.00-------------------------0.25-------------------------------------------------------0.25-
.....................TTGCGGAGAGGGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................... 1540.500.50----------------------0.25------------------------------------------------------0.25-----
..................GGGGCTCCCTCTCCGTCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................ 190.500.00------------------------------------------------------------------------0.25------0.25---
...................................................................................................CTGAGGTGGTCCATGC.......................................................................................................................................................................................................................................................................................................................................................... 1630.330.33-----------------------0.33-----------------------------------------------------------
..................GGGGCTCCCTCTCCGCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................ 190.250.00---------------------------------------------------------------------------0.25-------
....................GGCTCCCTCTCCGCAATGG...................................................................................................................................................................................................................................................................................................................................................................................................................................... 190.250.00--------------------------------------------------------------------------0.25--------
..................CGGAGAGGGAGCCCC............................................................................................................................................................................................................................................................................................................................................................................................................................................ 1540.250.25------------------------------------------------------------------------0.25----------
..................GGGGCTCCCTCTCCGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................... 170.250.00------------------------0.25----------------------------------------------------------
..................GGGGCTCCCTCTCCGCCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................ 190.250.00------------------------------------------------------------------------0.25----------
....................TTGCGGAGAGGGAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................... 1640.250.25--------------------------------------------------------------------------------0.25--
....................GGCTCCCTCTCCGCAATGA...................................................................................................................................................................................................................................................................................................................................................................................................................................... 190.250.00------------------------------------------------------------------------------0.25----
.................................................................................................................................................................................................................................TCCCGCCCTGGGAAG............................................................................................................................................................................................................................. 1570.140.14--------------------------0.14--------------------------------------------------------
...........................................................................................................................................................................................................................CCCTGGGAAGGGGGAG.................................................................................................................................................................................................................................. 1680.120.12--------------------------------------------------------------------------0.12--------
................................................................................................................................................................................................................................................................................................................................................................................................................CTGGCCTGGAGGGAGA............................................. 1690.110.11----------------------------------------------------------------------------------0.11