ID: uc002pjl.2_intron_4_0_chr19_49096074_f.5p
GENE: (5)
chr19:49096024-49096273+


(1)
AGO2.ip
(1)
BRAIN
(3)
BREAST
(2)
CELL-LINE
(3)
CERVIX
(1)
LIVER
(4)
OTHER
(13)
SKIN
(1)
TESTES

Sense strand
TGAAGGGCAAAGACAACTTCCTATTTATCACCTACGAGGAGCTGCAGCAGGTGAGTCCCCACCTCCTCCAGGTGCAGCGTCCCCCCCATACCCTCTGCTCACACCCCACACTCTCCCCTTCCCGAGGGTCTCAGGACCCCTCCGCTTCCCCATGCAATGCGCCAGCCCCTGGGGATACTGCAGGAACAGAACAGAGGCCCTGAGCCTGTGAGCAAGACCACAGACAAAATCCCTAAACCACACAGCAGGC
...........................................................................................((((((.((.........................(((((....))))).(((((.((((((......((....))...))))))....)).)))...)).)))))).....................................................
........................................................................................89.............................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR343337SRR343336RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343335SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR040037(GSM532922)
G243T. (cervix)
SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
.............................................................................................TCTGCTCACACCCCATG............................................................................................................................................17232.000.00125.00107.00--------------------------
.............................................................................................TCTGCTCACACCCCATGA...........................................................................................................................................185.000.002.003.00--------------------------
....GGGCAAAGACAACTTCCTATTTATCACCTACGAG....................................................................................................................................................................................................................3413.003.00--3.00-------------------------
.....................................................................................................CACCCCACACTCTCCTTTC..................................................................................................................................192.000.00----2.00-----------------------
...........................................................................................................................................................................GGGATACTGCAGGAACAGAAC..........................................................2112.002.00---2.00------------------------
................................TACGAGGAGCTGCAGCAGGTGA....................................................................................................................................................................................................2211.001.00------1.00---------------------
.........................TATCACCTACGAGGAGCTGCAGCAGGACTT...................................................................................................................................................................................................301.000.00-------------1.00--------------
.....................................................AGTCCCCACCTCCTCCAGGTGCAGCG...........................................................................................................................................................................2611.001.00-----1.00----------------------
...................................................................................................................................................................................GCAGGAACAGAACAGAGAAGG..................................................211.000.00------------------------1.00---
.................................ACGAGGAGCTGCAGCAGGACT....................................................................................................................................................................................................211.000.00------------------1.00---------
................................................................................................................................................................................................AGAGGCCCTGAGCCTGTGAGCAAGACC...............................2711.001.00--------------1.00-------------
.....GGCAAAGACAACTTCCTATTTATCACCTACGAGG...................................................................................................................................................................................................................3411.001.00--1.00-------------------------
........................................................................................................................................................................CTGGGGATACTGCAGGAACAGAAC..........................................................2411.001.00------------1.00---------------
.....................................GGAGCTGCAGCAGGTGCAGA.................................................................................................................................................................................................201.000.00----------1.00-----------------
.................................ACGAGGAGCTGCAGCAGATC.....................................................................................................................................................................................................201.000.00---------------1.00------------
.................................................................................CCCCCCATACCCTCTCTA.......................................................................................................................................................181.000.00--------1.00-------------------
..............................CCTACGAGGAGCTGCAGC..........................................................................................................................................................................................................1811.001.00---------1.00------------------
.................................................................................................................................................................................CTGCAGGAACAGAACAGAGGCCCT.................................................2411.001.00-----------------------1.00----
........................TTATCACCTACGAGGAGCTGC.............................................................................................................................................................................................................2111.001.00-----------------1.00----------
....................CTATTTATCACCTACGAGGAGCTGCAGC..........................................................................................................................................................................................................2811.001.00-------1.00--------------------
..............................CCTACGAGGAGCTGCAGCAGGAC.....................................................................................................................................................................................................231.000.00---------------------1.00------
..................................CGAGGAGCTGCAGCAGGACT....................................................................................................................................................................................................201.000.00-------------------1.00--------
................................TACGAGGAGCTGCAG...........................................................................................................................................................................................................1570.710.71-----0.57--------------------0.14-
..............................................................................................................................................................GCGCCAGCCCCTGGG.............................................................................1550.200.20------0.20---------------------
...AGGGCAAAGACAACTT.......................................................................................................................................................................................................................................1660.170.17-----0.17----------------------
.................................ACGAGGAGCTGCAGC..........................................................................................................................................................................................................1570.140.14---------------------------0.14

Antisense strand
TGAAGGGCAAAGACAACTTCCTATTTATCACCTACGAGGAGCTGCAGCAGGTGAGTCCCCACCTCCTCCAGGTGCAGCGTCCCCCCCATACCCTCTGCTCACACCCCACACTCTCCCCTTCCCGAGGGTCTCAGGACCCCTCCGCTTCCCCATGCAATGCGCCAGCCCCTGGGGATACTGCAGGAACAGAACAGAGGCCCTGAGCCTGTGAGCAAGACCACAGACAAAATCCCTAAACCACACAGCAGGC
...........................................................................................((((((.((.........................(((((....))))).(((((.((((((......((....))...))))))....)).)))...)).)))))).....................................................
........................................................................................89.............................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR343337SRR343336RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343335SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR040037(GSM532922)
G243T. (cervix)
SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
..................................................................................................TCACACCCCACACTCTGG...................................................................................................................................... 181.000.00-----------1.00----------------
....................................................................................................................................................................................CAGGAACAGAACAGAAGAG................................................... 191.000.00-------------------------1.00--
.........................................................CCCACCTCCTCCAGGTCCT.............................................................................................................................................................................. 191.000.00----------------------1.00-----
.........................................................CCCACCTCCTCCAGGATAG.............................................................................................................................................................................. 191.000.00----------------1.00-----------
......................................................................................................................................................................................................................................CCTGCTGTGTGGTTTAGGG. 1911.001.00--------------------1.00-------