ID: uc002pev.1_intron_2_0_chr19_47030330_r.5p
GENE: (1)
chr19:47103940-47104189-


(2)
B-CELL 		(2)
BREAST 		(14)
CELL-LINE 		(1)
CERVIX 		(1)
FIBROBLAST 		(8)
HEART 		(2)
HELA 		(1)
KIDNEY 		(3)
LIVER 		(3)
OTHER 		(11)
SKIN 		(1)
UTERUS

Sense strand
CTTCCCTGCAATGCGTCAAACTGGGGCGAGCCACTGCAAGGTGGTGGTGGGTAAGTCTGAACTCTGTGGCCGCGTGGGGCTTTGAGGAGTAACGAGGCGAAGGGGGAAACGGCGTCGCCGTTAGAGAAGCAAATACGTCGTTTCTGTGGCCAGGAGGTGGTAAAAAGGCTGGCGACAAATGCAGAAGGGCTTTCTCGGCTCTCCCCTTTAACCGACGGACGATGGTTCAATCCAAAATGCTAGGGTTTAG
.............................................((.(((..((((....((((.(((((((.....((((((........))))))......(((((((((((....(((.....)))....)))))))))))))))))))))).......((((.((.(((.....)))....)).))))...))))..)))))...........................................
............................................45................................................................................................................................................................207.........................................
SizePerfect hitTotal NormPerfect NormSRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040029(GSM532914)
G026T. (cervix)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM339994(GSM339994)
hues6. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
.................................................GGTAAGTCTGAACTCTG........................................................................................................................................................................................17127.0027.0012.003.001.002.003.00---2.002.00--1.00----------------------------1.00-------
..................................................GTAAGTCTGAACTCTG........................................................................................................................................................................................16321.6721.6712.333.331.670.670.33--0.670.670.67--1.00-----------------------------------0.33
...............................................TGGGTAAGTCTGAACTCTG........................................................................................................................................................................................1916.006.002.00-1.002.00--------------------------------------1.00------
....................................................AAGTCTGAACTCTGTGGC....................................................................................................................................................................................1815.005.00-----3.00-------------------1.00-----1.00-----------------
................................................GGGTAAGTCTGAACTCTG........................................................................................................................................................................................1813.003.001.00-1.00----1.00-----------------------------------------
...................................GCAAGGTGGTGGTGGGTAAGTC.................................................................................................................................................................................................2212.002.00-----------2.00-------------------------------------
..........ATGCGTCAAACTGGGGCGAGCCACT.......................................................................................................................................................................................................................2512.002.00---------------2.00---------------------------------
..............................................GTGGGTAAGTCTGAACTCTG........................................................................................................................................................................................2012.002.00------2.00------------------------------------------
.........................................................................................................................................................................................AGGGCTTTCTCGGCTGTA...............................................182.000.00---------------------------1.00-----------1.00---------
....................................................................................................................................ATACGTCGTTTCTGTGGC....................................................................................................1812.002.00----------2.00--------------------------------------
........CAATGCGTCAAACTGGGGCGAGCCA.........................................................................................................................................................................................................................2512.002.00-------------2.00-----------------------------------
..................................................GTAAGTCTGAACTCTGTGGC....................................................................................................................................................................................2012.002.00--1.00---1.00------------------------------------------
....................................CAAGGTGGTGGTGGGTAAGTCTG...............................................................................................................................................................................................2311.001.00----------------------------------1.00--------------
.........................................................................GTGGGGCTTTGAGGAGTAACG............................................................................................................................................................2111.001.00-------------------------------------1.00-----------
...............................CACTGCAAGGTGGTGGTGG........................................................................................................................................................................................................1911.001.00----------------------------------------------1.00--
............................AGCCACTGCAAGGTGGTGGT..........................................................................................................................................................................................................2011.001.00--------------------1.00----------------------------
.....................................AAGGTGGTGGTGGGTAAGTCT................................................................................................................................................................................................2111.001.00-----------------------1.00-------------------------
..................................................GTAAGTCTGAACTCTGTGG.....................................................................................................................................................................................1911.001.001.00------------------------------------------------
...................................GCAAGGTGGTGGTGGGTAAGTCTGAA.............................................................................................................................................................................................2611.001.00--------------------------------1.00----------------
..................................TGCAAGGTGGTGGTGGGTAAGTCTG...............................................................................................................................................................................................2511.001.00---------------------------------------------1.00---
...........TGCGTCAAACTGGGGC...............................................................................................................................................................................................................................1611.001.00-----------------------------1.00-------------------
........................................................................CGTGGGGCTTTGAGGAGTAACGAGGCG.......................................................................................................................................................2711.001.00-----------------------------------1.00-------------
......................................................................................................................................................................................AGAAGGGCTTTCTCG.....................................................1511.001.00------------------------------------1.00------------
............................................................................GGGCTTTGAGGAGTAACGAGGCG.......................................................................................................................................................2311.001.00------------------------1.00------------------------
................................................................................TTTGAGGAGTAACGAGGCGAAGG...................................................................................................................................................2311.001.00------------------------------1.00------------------
...................ACTGGGGCGAGCCACTGCA....................................................................................................................................................................................................................1911.001.00---------------------1.00---------------------------
......................................................GTCTGAACTCTGTGGCCGCGTGGGGCTT........................................................................................................................................................................2811.001.00----------------------------1.00--------------------
..............................................GTGGGTAAGTCTGAACTC..........................................................................................................................................................................................1811.001.00-------------------1.00-----------------------------
...................................................................GGCCGCGTGGGGCTTGTTG....................................................................................................................................................................191.000.00--------------------------1.00----------------------
.....................................................AGTCTGAACTCTGTGGCCGC.................................................................................................................................................................................2011.001.00--------------1.00----------------------------------
................................ACTGCAAGGTGGTGGTGGGTAAGTCTG...............................................................................................................................................................................................2711.001.00-------1.00-----------------------------------------
..............................................GTGGGTAAGTCTGAACTCTGTGGCC...................................................................................................................................................................................2511.001.00----------------------------------------1.00--------
..........................................................................................................................................CGTTTCTGTGGCCAGGAGG.............................................................................................1911.001.00--------------------------------------------1.00----
............................................................................................CGAGGCGAAGGGGGAAACGGCGT.......................................................................................................................................2311.001.00-------------------------------------------1.00-----
......TGCAATGCGTCAAACTGGGGC...............................................................................................................................................................................................................................2111.001.00----------------------1.00--------------------------
.......................................GGTGGTGGTGGGTAAGTCTG...............................................................................................................................................................................................2011.001.00-----------------1.00-------------------------------
...............................................TGGGTAAGTCTGAACTC..........................................................................................................................................................................................1711.001.00--------------1.00----------------------------------
..............................................................................................AGGCGAAGGGGGAAACGG..........................................................................................................................................1811.001.00------------------1.00------------------------------
............................................TGGTGGGTAAGTCTGAACTCTGT.......................................................................................................................................................................................2311.001.00---1.00---------------------------------------------
..........................................................GAACTCTGTGGCCGCGT...............................................................................................................................................................................1720.500.50-----------------------------------------------0.50-

Antisense strand
CTTCCCTGCAATGCGTCAAACTGGGGCGAGCCACTGCAAGGTGGTGGTGGGTAAGTCTGAACTCTGTGGCCGCGTGGGGCTTTGAGGAGTAACGAGGCGAAGGGGGAAACGGCGTCGCCGTTAGAGAAGCAAATACGTCGTTTCTGTGGCCAGGAGGTGGTAAAAAGGCTGGCGACAAATGCAGAAGGGCTTTCTCGGCTCTCCCCTTTAACCGACGGACGATGGTTCAATCCAAAATGCTAGGGTTTAG
.............................................((.(((..((((....((((.(((((((.....((((((........))))))......(((((((((((....(((.....)))....)))))))))))))))))))))).......((((.((.(((.....)))....)).))))...))))..)))))...........................................
............................................45................................................................................................................................................................207.........................................
SizePerfect hitTotal NormPerfect NormSRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040029(GSM532914)
G026T. (cervix)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM339994(GSM339994)
hues6. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
.................................................................................................................................................................................................................GAACCATCGTCCGTCGGTT...................... 1911.001.00--------------------------------------1.00----------
...................................................................................................................................................................................................ATCGTCCGTCGGTTAAAGGGGAGAGCCG........................... 2811.001.00----------------1.00--------------------------------
.....................................................................................................................................................................AGGCTGGCGACAAATACC................................................................... 181.000.00---------------------------------1.00---------------