ID: uc002pcz.2_intron_0_0_chr19_46216832_r.5p
GENE: (1)
chr19:46233907-46234156-


(2)
AGO2.ip
(13)
B-CELL
(6)
BRAIN
(27)
BREAST
(22)
CELL-LINE
(10)
CERVIX
(1)
FIBROBLAST
(3)
HEART
(3)
HELA
(3)
LIVER
(1)
OTHER
(16)
SKIN
(1)
TESTES
(1)
UTERUS
(1)
XRN.ip

Sense strand
GCGAGTGGGGGAAACCCGCGTAGCCGAGGGAGATGCAGCGCGCGGCGATGGTGAGAGCCCAGGCGCGGGCCGGGGGCGCTGGAGAGTCGGGACGGGGGTTCGGGACCGGGTGACGAGGGGGAAGAGGCAGGGGCGAAAGAAGGGGCTGGGTGAGGGGAGATTGCCTGGGGGAGAGGACTGGGAGGAATGGGAGCCGGAGGTAGTAGTAGAAGAATGGTGGCTTGGGGAGGGGTCTTGGAGGTGGGGTGGG
.....................................................................((((.(((........))).((((....))))....((.(((...............((....))...........((((((((.......))))))))........))).))...........)))).....................................................
.....................................................................70................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR038852(GSM458535)
QF1160MB. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
TAX577744(Rovira)
total RNA. (breast)
SRR040037(GSM532922)
G243T. (cervix)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577579(Rovira)
total RNA. (breast)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
TAX577746(Rovira)
total RNA. (breast)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577741(Rovira)
total RNA. (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
TAX577743(Rovira)
total RNA. (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR040035(GSM532920)
G001T. (cervix)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
TAX577739(Rovira)
total RNA. (breast)
TAX577590(Rovira)
total RNA. (breast)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR343334SRR191396(GSM715506)
29genomic small RNA (size selected RNA from t. (breast)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040040(GSM532925)
G612N. (cervix)
SRR191419(GSM715529)
41genomic small RNA (size selected RNA from t. (breast)
SRR029124(GSM416753)
HeLa. (hela)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR191457(GSM715567)
27genomic small RNA (size selected RNA from t. (breast)
SRR040011(GSM532896)
G529T. (cervix)
GSM532880(GSM532880)
G659T. (cervix)
SRR040036(GSM532921)
G243N. (cervix)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR189782SRR037937(GSM510475)
293cand2. (cell line)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR029128(GSM416757)
H520. (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577742(Rovira)
total RNA. (breast)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR040017(GSM532902)
G645T. (cervix)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
SRR038860(GSM458543)
MM426. (cell line)
SRR191505(GSM715615)
139genomic small RNA (size selected RNA from . (breast)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR191572(GSM715682)
66genomic small RNA (size selected RNA from t. (breast)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
GSM359189(GSM359189)
HepG2_2pm_3. (cell line)
SRR040015(GSM532900)
G623T. (cervix)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
..........................................................................GGCGCTGGAGAGTCGGGC..............................................................................................................................................................18127.003.001.007.00---2.00---3.00---2.00-1.002.00----------------1.00---1.00------------------1.00-1.00------------1.00-----1.001.001.00-------------1.00----------------
...........................................................................GCGCTGGAGAGTCGGGCCCA...........................................................................................................................................................20210.001.505.00--4.50-----------------------------------------------------------------------------------------------------0.50----
.................GCGTAGCCGAGGGAGATG.......................................................................................................................................................................................................................1818.008.00------3.00-------------------------1.00---------1.00-------------------------1.00-------------------------1.00--1.00------------
..........................................................................GGCGCTGGAGAGTCGGGCCCA...........................................................................................................................................................2117.003.002.00--------1.00--------2.00---------------1.00------------------------------------------------------------1.00--------------
...........................................................................GCGCTGGAGAGTCGGGCCC............................................................................................................................................................1925.001.501.00--1.50------1.50---------------------0.50--------------------------------------------------------------------------0.50--
............................................................................CGCTGGAGAGTCGGGC..............................................................................................................................................................164.000.00-------------------------------1.00---------------------1.00------------1.00--------1.00----------------------------------
...............CCGCGTAGCCGAGGGAGATG.......................................................................................................................................................................................................................2013.003.00------------------------------------1.00---------------------------------------------1.00---------1.00-----------------
..........................................................................GGCGCTGGAGAGTCGGGG..............................................................................................................................................................1813.003.00-------1.00------1.00-----1.00-----------------------------------------------------------------------------------------
..........................................................................GGCGCTGGAGAGTCGGG...............................................................................................................................................................1713.003.00-1.00---1.00-------1.00------------------------------------------------------------------------------------------------
...........................................................................GCGCTGGAGAGTCGGGCC.............................................................................................................................................................1822.501.50---0.500.50--0.50--------------------------0.50-------------------------------------------------------------------0.50-------
....................................................................GCCGGGGGCGCTGGAGAG....................................................................................................................................................................1812.002.00----2.00---------------------------------------------------------------------------------------------------------
............................................................................................................................................................................GAGGACTGGGAGGAATGGGAGCCGG.....................................................2512.002.00--2.00-----------------------------------------------------------------------------------------------------------
..............CCCGCGTAGCCGAGGGAGA.........................................................................................................................................................................................................................1912.002.00-------------------2.00------------------------------------------------------------------------------------------
................CGCGTAGCCGAGGGAGATGC......................................................................................................................................................................................................................2012.002.00--------------------------------------1.00-1.00---------------------------------------------------------------------
..........................................................................................................................................................................................ATGGGAGCCGGAGGTAGTAGTAGA........................................2412.002.00--2.00-----------------------------------------------------------------------------------------------------------
.............................................................GGCGCGGGCCGGGGGCGCTGGAGAG....................................................................................................................................................................2512.002.00--2.00-----------------------------------------------------------------------------------------------------------
..........................................................CCAGGCGCGGGCCGGGGG..............................................................................................................................................................................1812.002.00-----------2.00--------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................GGAGGTAGTAGTAGAAGAATGGTGG..............................2512.002.00-----------------------2.00--------------------------------------------------------------------------------------
...................GTAGCCGAGGGAGATGC......................................................................................................................................................................................................................1712.002.00------------------------2.00-------------------------------------------------------------------------------------
.............................................................GGCGCGGGCCGGGGGGCGG..........................................................................................................................................................................192.000.00------------------------------1.00----------------------------1.00--------------------------------------------------
..........................................................................GGCGCTGGAGAGTCGGGCC.............................................................................................................................................................1912.003.00-------1.00------------1.00-----------------------------------------------------------------------------------------
........................................................................GGGGCGCTGGAGAGTCGGGA..............................................................................................................................................................2012.002.00---------------2.00----------------------------------------------------------------------------------------------
..........................................................................GGCGCTGGAGAGTCGGGCCC............................................................................................................................................................2012.003.001.00---1.00---------------------------------------------------------------------------------------------------------
................CGCGTAGCCGAGGGAGATGCA.....................................................................................................................................................................................................................2112.002.00--------------------------------------------------1.00-----------------------------------1.00-----------------------
..........................................................................................................................................................................................ATGGGAGCCGGAGGTAGTA.............................................1912.002.00-----------------2.00--------------------------------------------------------------------------------------------
............................................................................................................................AGGCAGGGGCGAAAGACTA...........................................................................................................192.000.00--------2.00-----------------------------------------------------------------------------------------------------
..............CCCGCGTAGCCGAGGGAGATG.......................................................................................................................................................................................................................2112.002.00-------------------------------------------------------1.00-------------------------1.00----------------------------
..........................................................................GGCGCTGGAGAGTCGGGCA.............................................................................................................................................................1912.003.00-------1.00--------------------------------------------------------------1.00---------------------------------------
...........................................................................GCGCTGGAGAGTCGGG...............................................................................................................................................................1621.501.50---------------------0.50------------------------------------------------------------------------------0.50-----0.50---
.................................................................................................................................................................TGCCTGGGGGAGAGGACTGGGAGG.................................................................2411.001.00-------------------------------------------------------------------------1.00------------------------------------
...........................................................................GCGCTGGAGAGTCGGGAA.............................................................................................................................................................181.000.00-1.00------------------------------------------------------------------------------------------------------------
......................................CGCGCGGCGATGGTGAGAGCC...............................................................................................................................................................................................2111.001.00---------------------------------------------------------------1.00----------------------------------------------
.......GGGGAAACCCGCGTAGCCGAG..............................................................................................................................................................................................................................2111.001.00------------------------------------------------1.00-------------------------------------------------------------
.....................................................................................................................GGGGAAGAGGCAGGGGACT..................................................................................................................191.000.00------------1.00-------------------------------------------------------------------------------------------------
..............................AGATGCAGCGCGCGGCGATG........................................................................................................................................................................................................2011.001.00------------------------------------------------------------------------------------------------1.00-------------
..........................................................................GGCGCTGGAGAGTCGGGTGC............................................................................................................................................................2011.003.00------------1.00-------------------------------------------------------------------------------------------------
....................................................................................................................GGGGGAAGAGGCAGGGGT....................................................................................................................181.000.00------------------------------1.00-------------------------------------------------------------------------------
.....................................GCGCGCGGCGATGGTGAGAGCA...............................................................................................................................................................................................221.000.00----------------------1.00---------------------------------------------------------------------------------------
.............................................CGATGGTGAGAGCCCAGGCGCGGGCC...................................................................................................................................................................................2611.001.00---------------------1.00----------------------------------------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGAGGACTGGGCTTG................................................................211.000.00--------------1.00-----------------------------------------------------------------------------------------------
..........................AGGGAGATGCAGCGCGCGGCGATGGTGGCAC.................................................................................................................................................................................................311.000.00---------------------------1.00----------------------------------------------------------------------------------
..........................................................................................................................................................................GAGAGGACTGGGAGGGACG.............................................................191.000.00---------------------1.00----------------------------------------------------------------------------------------
....................................................................................................................................................................................................GAGGTAGTAGTAGAAGAATGGTGGC.............................2511.001.00-----------------------------1.00--------------------------------------------------------------------------------
.........................................................................GGGCGCTGGAGAGTCGGG...............................................................................................................................................................1811.001.00--------------------------------------------------------------------------1.00-----------------------------------
...........................................................................GCGCTGGAGAGTCGGGC..............................................................................................................................................................1721.001.50---------------------------------0.50---------------------------------------------------------------------0.50------
...........................................GGCGATGGTGAGAGCCCA.............................................................................................................................................................................................1811.001.00----------------------1.00---------------------------------------------------------------------------------------
........................................CGCGGCGATGGTGAGAGCC...............................................................................................................................................................................................1911.001.00------------------------------------------------------------------------------------1.00-------------------------
................................ATGCAGCGCGCGGCGATG........................................................................................................................................................................................................1811.001.00-----------------------------------------------------------------1.00--------------------------------------------
..........................................................................GGCGCTGGAGAGTCGGGA..............................................................................................................................................................1811.001.00------------1.00-------------------------------------------------------------------------------------------------
.........................................GCGGCGATGGTGAGAGCCC..............................................................................................................................................................................................1911.001.00---------------------------------------------1.00----------------------------------------------------------------
................CGCGTAGCCGAGGGAGA.........................................................................................................................................................................................................................1711.001.00-------------------------------------------1.00------------------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGAGGACTGGAT...................................................................181.000.00-----1.00--------------------------------------------------------------------------------------------------------
........................................CGCGGCGATGGTGAGAGC................................................................................................................................................................................................1811.001.00----1.00---------------------------------------------------------------------------------------------------------
...................GTAGCCGAGGGAGATGCAG....................................................................................................................................................................................................................1911.001.00------------------------------------------------------------1.00-------------------------------------------------
..........................................................................GGCGCTGGAGAGTCGCGC..............................................................................................................................................................181.000.00--------------------1.00-----------------------------------------------------------------------------------------
...............................................................................................................................................GGCTGGGTGAGGGGACCCA........................................................................................191.000.00---------------------------1.00----------------------------------------------------------------------------------
.........................................................................GGGCGCTGGAGAGTCGGGA..............................................................................................................................................................1911.001.00-----------------1.00--------------------------------------------------------------------------------------------
.........................GAGGGAGATGCAGCGCGCGGCGATGT.......................................................................................................................................................................................................261.000.00-------------------------------------------------------------------1.00------------------------------------------
.....................................................................................................................................................................TGGGGGAGAGGACTGGACTT.................................................................201.000.00----------------------------------------------------------------------------1.00---------------------------------
..........................................................................GGCGCTGGAGAGTCGGGACGG...........................................................................................................................................................2111.001.00--1.00-----------------------------------------------------------------------------------------------------------
..........................................................................GGCGCTGGAGAGTCGGGTCCA...........................................................................................................................................................2111.003.00------------------1.00-------------------------------------------------------------------------------------------
............................................................................CGCTGGAGAGTCGGGACCA...........................................................................................................................................................191.000.00--------------------------------------------1.00-----------------------------------------------------------------
.........................................................................................................................................AGAAGGGGCTGGGTGAGGGGAGA..........................................................................................2311.001.00----------------------------1.00---------------------------------------------------------------------------------
...........................................................................GCGCTGGAGAGTCGGGACC............................................................................................................................................................191.000.00-------------------------1.00------------------------------------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGAGGACTGTT....................................................................171.000.00-----------------------------------------1.00--------------------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGAGGACTGGGTTG.................................................................201.000.00--------------1.00-----------------------------------------------------------------------------------------------
............................................................AGGCGCGGGCCGGGGGCG............................................................................................................................................................................1841.001.00----------------------0.25----------------------------------------------------------------------------0.75----------
..........................................CGGCGATGGTGAGAGCCC..............................................................................................................................................................................................1811.001.00-----------------------------------------------------------------------------------1.00--------------------------
................................ATGCAGCGCGCGGCGATGG.......................................................................................................................................................................................................1911.001.00-----------1.00--------------------------------------------------------------------------------------------------
........................................CGCGGCGATGGTGAGAGCCC..............................................................................................................................................................................................2011.001.00--------------------------1.00-----------------------------------------------------------------------------------
................................................................................................................ACGAGGGGGAAGAGGCT.........................................................................................................................171.000.00---------------------------------------------------1.00----------------------------------------------------------
.....................................GCGCGCGGCGATGGTGA....................................................................................................................................................................................................1711.001.00--------1.00-----------------------------------------------------------------------------------------------------
..........................................................................GGCGCTGGAGAGTCGGCC..............................................................................................................................................................181.000.00-------------------1.00------------------------------------------------------------------------------------------
......................GCCGAGGGAGATGCAGCGCGCGG.............................................................................................................................................................................................................2311.001.00-------------------------------------------------------------------------------------1.00------------------------
..........................................................................GGCGCTGGAGAGTCGGGCCCC...........................................................................................................................................................2111.003.00----------1.00---------------------------------------------------------------------------------------------------
............................................................................CGCTGGAGAGTCGGGCCC............................................................................................................................................................181.000.00-------------------------1.00------------------------------------------------------------------------------------
...............................................................................TGGAGAGTCGGGACGGGGGTTCG....................................................................................................................................................2311.001.00---------------------------------------------------------------------1.00----------------------------------------
..........................................................................................................................................................................GAGAGGACTGGGAGGGAC..............................................................181.000.00-------------------------------1.00------------------------------------------------------------------------------
....................................................GAGAGCCCAGGCGCGGG.....................................................................................................................................................................................1711.001.00-------------------------------------------------------------1.00------------------------------------------------
.................GCGTAGCCGAGGGAGATGCAGCGCGCGGC............................................................................................................................................................................................................2911.001.00-----1.00--------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGAGGACTGGACAG.................................................................201.000.00----------------------------------------------------------------1.00---------------------------------------------
..............................................................................CTGGAGAGTCGGGACGGG..........................................................................................................................................................1811.001.00----1.00---------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGAGGACTGGATAT.................................................................201.000.00-----------------------------------------------------------------------------------------1.00--------------------
...............................................................................................................................CAGGGGCGAAAGAAGGGGC........................................................................................................1911.001.00------------------------------------------------------------------------1.00-------------------------------------
.......................................................................GGGGGCGCTGGAGAGTCGGGA..............................................................................................................................................................2111.001.00-----------------------------1.00--------------------------------------------------------------------------------
...........................................................................GCGCTGGAGAGTCGGGACCA...........................................................................................................................................................201.000.001.00-------------------------------------------------------------------------------------------------------------
..........................................................................GGCGCTGGAGAGTCGGGCAGG...........................................................................................................................................................2111.003.00--1.00-----------------------------------------------------------------------------------------------------------
..........................................CGGCGATGGTGAGAGCCCAGG...........................................................................................................................................................................................2111.001.00-----------------------------------------------1.00--------------------------------------------------------------
....................................................................GCCGGGGGCGCTGGAGAGTCGGGACGGGGGTTCG....................................................................................................................................................3411.001.00--------------------------------------------------------------1.00-----------------------------------------------
...........................................................CAGGCGCGGGCCGGGGGG.............................................................................................................................................................................181.000.00---------------------------------------------------------1.00----------------------------------------------------
.........................................................................................................................................AGAAGGGGCTGGGTGAGGGGAGG..........................................................................................231.000.00----------------------------1.00---------------------------------------------------------------------------------
..........................................CGGCGATGGTGAGAGGGCA.............................................................................................................................................................................................191.000.00--------------------------1.00-----------------------------------------------------------------------------------
................CGCGTAGCCGAGGGAGATG.......................................................................................................................................................................................................................1911.001.00-------------------------------------------------1.00------------------------------------------------------------
..........................................................................GGCGCTGGAGAGTCGAGC..............................................................................................................................................................181.000.00----------------1.00---------------------------------------------------------------------------------------------
.................GCGTAGCCGAGGGAGCTG.......................................................................................................................................................................................................................181.000.00------1.00-------------------------------------------------------------------------------------------------------
..........................................................................GGCGCTGGAGAGTCGGGGACA...........................................................................................................................................................2111.003.001.00-------------------------------------------------------------------------------------------------------------
.....................................GCGCGCGGCGATGGTGG....................................................................................................................................................................................................171.000.00--------1.00-----------------------------------------------------------------------------------------------------
............................................................................CGCTGGAGAGTCGGGCACA...........................................................................................................................................................191.000.00----------1.00---------------------------------------------------------------------------------------------------
......................GCCGAGGGAGATGCAGCG..................................................................................................................................................................................................................1811.001.00--------------------------------------------------------------------------------1.00-----------------------------
.....................................................................................................................................................................TGGGGGAGAGGACTGGGTGTG................................................................211.000.00------------------------------------------------------------------------------------------1.00-------------------
............................................................................CGCTGGAGAGTCGGGCCCA...........................................................................................................................................................191.000.00----------------------------------------------1.00---------------------------------------------------------------
................CGCGTAGCCGAGGGAGGTG.......................................................................................................................................................................................................................191.000.00------------------------------------------------------1.00-------------------------------------------------------
...........................................................................GCGCTGGAGAGTCGGGCG.............................................................................................................................................................1820.501.50--------------------------------------------------------------------------------------------------------0.50-----
...........................................................................GCGCTGGAGAGTCGG................................................................................................................................................................1520.500.50-----------------------------------------------------------------------------------------------------0.50--------
...........................................................................GCGCTGGAGAGTCGGGCT.............................................................................................................................................................1820.501.50-------0.50------------------------------------------------------------------------------------------------------
...........................................................................GCGCTGGAGAGTCGGGGCCA...........................................................................................................................................................2020.501.500.50-------------------------------------------------------------------------------------------------------------
...........................................................................GCGCTGGAGAGTCGGGCCAA...........................................................................................................................................................2020.501.50---0.50----------------------------------------------------------------------------------------------------------
...............CCGCGTAGCCGAGGGAG..........................................................................................................................................................................................................................1730.330.33--------------------------------------------------------------------------------------------------0.33-----------
...............................................ATGGTGAGAGCCCAGGC..........................................................................................................................................................................................1740.250.25------------------------------------------------------------------------------------------------------------0.25-
.............................................................................................................................................................................AGGACTGGGAGGAATGG............................................................1740.250.25-------------------------------------------------------------------------------------------------------------0.25

Antisense strand
GCGAGTGGGGGAAACCCGCGTAGCCGAGGGAGATGCAGCGCGCGGCGATGGTGAGAGCCCAGGCGCGGGCCGGGGGCGCTGGAGAGTCGGGACGGGGGTTCGGGACCGGGTGACGAGGGGGAAGAGGCAGGGGCGAAAGAAGGGGCTGGGTGAGGGGAGATTGCCTGGGGGAGAGGACTGGGAGGAATGGGAGCCGGAGGTAGTAGTAGAAGAATGGTGGCTTGGGGAGGGGTCTTGGAGGTGGGGTGGG
.....................................................................((((.(((........))).((((....))))....((.(((...............((....))...........((((((((.......))))))))........))).))...........)))).....................................................
.....................................................................70................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR038852(GSM458535)
QF1160MB. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
TAX577744(Rovira)
total RNA. (breast)
SRR040037(GSM532922)
G243T. (cervix)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577579(Rovira)
total RNA. (breast)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
TAX577746(Rovira)
total RNA. (breast)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577741(Rovira)
total RNA. (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
TAX577743(Rovira)
total RNA. (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR040035(GSM532920)
G001T. (cervix)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
TAX577739(Rovira)
total RNA. (breast)
TAX577590(Rovira)
total RNA. (breast)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR343334SRR191396(GSM715506)
29genomic small RNA (size selected RNA from t. (breast)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040040(GSM532925)
G612N. (cervix)
SRR191419(GSM715529)
41genomic small RNA (size selected RNA from t. (breast)
SRR029124(GSM416753)
HeLa. (hela)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR191457(GSM715567)
27genomic small RNA (size selected RNA from t. (breast)
SRR040011(GSM532896)
G529T. (cervix)
GSM532880(GSM532880)
G659T. (cervix)
SRR040036(GSM532921)
G243N. (cervix)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR189782SRR037937(GSM510475)
293cand2. (cell line)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR029128(GSM416757)
H520. (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577742(Rovira)
total RNA. (breast)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR040017(GSM532902)
G645T. (cervix)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
SRR038860(GSM458543)
MM426. (cell line)
SRR191505(GSM715615)
139genomic small RNA (size selected RNA from . (breast)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR191572(GSM715682)
66genomic small RNA (size selected RNA from t. (breast)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
GSM359189(GSM359189)
HepG2_2pm_3. (cell line)
SRR040015(GSM532900)
G623T. (cervix)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
.............................................................GGCGCGGGCCGGGGGCGACTC........................................................................................................................................................................ 211.000.00----------------------------------------------------------------------------------------1.00---------------------
......................................................................................................................................................TGAGGGGAGATTGCCTAG.................................................................................. 181.000.00-----------------------------------1.00--------------------------------------------------------------------------
.......GGGGAAACCCGCGTAGGA................................................................................................................................................................................................................................. 181.000.00---------------------------------------------------------------------------------------1.00----------------------
..................................................................................................................................................................................................CTACTACTACCTCCG......................................... 1511.001.00---------------------------------------1.00----------------------------------------------------------------------
......................................................................................................................................................................GGGGGAGAGGACTGGGCGG................................................................. 191.000.00-------------------------------------------------------------------------------------------1.00------------------
...........................................GCTCTCACCATCGCC................................................................................................................................................................................................ 1520.500.50--------------------------------------------------------------------------------------------------0.50-----------