ID: uc002onx.2_intron_15_0_chr19_41026059_f.5p
GENE: (16)
chr19:41026009-41026258+


(1)
B-CELL
(1)
BRAIN
(2)
BREAST
(4)
CELL-LINE
(3)
CERVIX
(1)
FIBROBLAST
(4)
HEART
(4)
HELA
(6)
OTHER
(30)
SKIN
(1)
UTERUS

Sense strand
AGCTCTTCCTGCGGGATCTACGCCAGGCGCTCGTGGTGCTGCGTAACCAGGTGCCCACTCGGGGTGTACATTTCGGAGAGGGAGAGTCCGAGGCCGCGGGGGGATTGCAGGGACAGGGACATGCGGGGGTGGGGAGGAGGGTGTTTCCTGGGACCACTGGGTTCTGAGGTGGGTGGGAGGTGAGAGAGTATCCGGAATGGATAACTGAGTTTGTGGAACATCCAGTGTGTGTGGAAGTGTGTATGTAACA
......................................................................((((.....))))..((((....(((((......(((......))).....))))).....((((((......)))))).))))................................................................................................
................................................................65.......................................................................................154..............................................................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR189782SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR343336SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189784SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040041(GSM532926)
G612T. (cervix)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189787SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR189785SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR040006(GSM532891)
G601N. (cervix)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR343337TAX577580(Rovira)
total RNA. (breast)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577590(Rovira)
total RNA. (breast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
.....................................................................ATTTCGGAGAGGGAGC.....................................................................................................................................................................16118.008.00-4.001.001.00-1.00-1.001.00---1.00-2.00---2.00----------1.00-1.00----------1.001.00-------------
.....................................................................ATTTCGGAGAGGGAGCC....................................................................................................................................................................17111.008.00-1.004.00-------1.00--------------1.00-1.00--1.00--1.00-----1.00-----------------
.....................................................................ATTTCGGAGAGGGAGCCTG..................................................................................................................................................................19110.008.00-2.00-4.002.00---------------1.00-1.00----------------------------------
.....................................................................ATTTCGGAGAGGGAG......................................................................................................................................................................1518.008.00-1.00----------1.00------1.00------1.00--------1.00--1.00-1.00--------1.00-------
...................................................................................................................................GGGAGGAGGGTGTTTAGTT....................................................................................................197.000.002.00------------2.00--1.00----1.00-------------------------1.00---------
...................................................................................................................................GGGAGGAGGGTGTTTTGTT....................................................................................................195.000.004.00---------------1.00----------------------------------------
.....................................................................ATTTCGGAGAGGGAGCCT...................................................................................................................................................................1814.008.00----1.001.00----1.00-------------1.00--------------------------------
...................................................................................................................................GGGAGGAGGGTGTTTTGGT....................................................................................................193.000.003.00--------------------------------------------------------
.................................................................................................................................TGGGGAGGAGGGTGTTTTGTT....................................................................................................2141.250.25---------0.25-----------------------------------------0.750.25----
...................................................................................................................................GGGAGGAGGGTGTTTTGG.....................................................................................................181.000.00-----------------------------------------1.00---------------
................................................................................................CGGGGGGATTGCAGGGGTG.......................................................................................................................................191.000.00-----------1.00---------------------------------------------
...................................................................................................................................GGGAGGAGGGTGTTTAGG.....................................................................................................181.000.00---------------------------------------------1.00-----------
.....................................................................ATTTCGGAGAGGGAGCATG..................................................................................................................................................................1911.008.00------------------------------------1.00--------------------
.................................................................................................................................TGGGGAGGAGGGTGTTTCGGT....................................................................................................211.000.00----------------------------1.00----------------------------
.....................................................................ATTTCGGAGAGGGAGCCCG..................................................................................................................................................................1911.008.00----1.00----------------------------------------------------
...................................................................................................................................GGGAGGAGGGTGTTTAGT.....................................................................................................181.000.001.00--------------------------------------------------------
.................................................................................................................................TGGGGAGGAGGGTGTTTTGG.....................................................................................................2040.750.25---------0.50---------------------------------------------0.25-
.................................................................................................................................TGGGGAGGAGGGTGTTTTGGT....................................................................................................2140.500.25---------0.50-----------------------------------------------
.................................................................................................................................TGGGGAGGAGGGTGTTTGGGT....................................................................................................2140.500.25---------0.25-------------------------------------------0.25---
.................................................................................................................................TGGGGAGGAGGGTGTTTAAT.....................................................................................................2040.250.25---------0.25-----------------------------------------------
.................................................................................................................................TGGGGAGGAGGGTGTTTAGT.....................................................................................................2040.250.25---------0.25-----------------------------------------------
.................................................................................................................................TGGGGAGGAGGGTGTTT........................................................................................................1740.250.25------------------------------------------------------0.25--
.................................................................................................................................TGGGGAGGAGGGTGTTTAGG.....................................................................................................2040.250.25---------0.25-----------------------------------------------
.................................................................................................................................TGGGGAGGAGGGTGTTTTATT....................................................................................................2140.250.25---------0.25-----------------------------------------------
.................................................................................................................................TGGGGAGGAGGGTGTTTAGGT....................................................................................................2140.250.25---------0.25-----------------------------------------------

Antisense strand
AGCTCTTCCTGCGGGATCTACGCCAGGCGCTCGTGGTGCTGCGTAACCAGGTGCCCACTCGGGGTGTACATTTCGGAGAGGGAGAGTCCGAGGCCGCGGGGGGATTGCAGGGACAGGGACATGCGGGGGTGGGGAGGAGGGTGTTTCCTGGGACCACTGGGTTCTGAGGTGGGTGGGAGGTGAGAGAGTATCCGGAATGGATAACTGAGTTTGTGGAACATCCAGTGTGTGTGGAAGTGTGTATGTAACA
......................................................................((((.....))))..((((....(((((......(((......))).....))))).....((((((......)))))).))))................................................................................................
................................................................65.......................................................................................154..............................................................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR189782SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR343336SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189784SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040041(GSM532926)
G612T. (cervix)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189787SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR189785SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR040006(GSM532891)
G601N. (cervix)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR343337TAX577580(Rovira)
total RNA. (breast)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577590(Rovira)
total RNA. (breast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
................................................................................................................................................................GTTCTGAGGTGGGTGTCTG....................................................................... 1914.000.00------3.00-2.00------2.00-2.00-----1.00--------1.00-1.00-----------1.00-1.00--------
.........................................................................................................................................................................................................................................GAAGTGTGTATGTAAAGA 183.000.00-------2.00------------------------------------------1.00------
..................................................................................................................................................CCTGGGACCACTGGGTCTGC.................................................................................... 201.000.00-----------1.00---------------------------------------------
..............................................................................................................................................................GGGTTCTGAGGTGGGTGGTG........................................................................ 201.000.00-----1.00---------------------------------------------------
..........................................................................................................................GCGGGGGTGGGGAGGGCTT............................................................................................................. 191.000.00--------------------------------------------1.00------------
.......................................................................................CCGAGGCCGCGGGGGGACC................................................................................................................................................ 191.000.00-------------------------------------1.00-------------------
.............................................................................CTCGGACTCTCCCTC.............................................................................................................................................................. 1550.200.20--------------------------------------------------------0.20