ID: uc002obz.3_intron_4_0_chr19_36350534_f.5p
GENE: (5)
chr19:36350484-36350733+


(1)
AGO2.ip 		(2)
B-CELL 		(2)
BRAIN 		(4)
BREAST 		(16)
CELL-LINE 		(5)
CERVIX 		(1)
HEART 		(7)
LIVER 		(1)
OTHER 		(2)
SKIN 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
CCAGGCCCTGCCCACAGGAAGAGACACAGCTATCACACTGAGCCTGCAGTGTGAGTGCAGCTGGCCCTGGGAAAGAGGGGTGTGGGGCCCTGACTCCTGGGTATGAGGAAGGAGGGGACTGTGGCCCTTGGGGAATGAGGAAACTGGAGCCTGGACTCCTGGATCTAAGATAGCAGGAGAGGGCTGGGTATGGTAGCTCACGCCTGTACTCACAGAACTTTGGGAGGTCGAGGCAGGCGGATCATCTAAG
................................................................((((......(((((.(((((..((((..(((((.......))).))..)))).))))).))))))))).....................................................................................................................
.......................................................56...........................................................................133...................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040029(GSM532914)
G026T. (cervix)		SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		TAX577740(Rovira)
total RNA. (breast)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR191419(GSM715529)
41genomic small RNA (size selected RNA from t. (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR189787SRR040011(GSM532896)
G529T. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR040031(GSM532916)
G013T. (cervix)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038859(GSM458542)
MM386. (cell line)		SRR040017(GSM532902)
G645T. (cervix)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038857(GSM458540)
D20. (cell line)
............................................................CTGGCCCTGGGAAAGCGTT...........................................................................................................................................................................1963.000.0027.005.0014.005.003.00-1.001.001.00-2.00------------1.001.00-----1.00-1.00-----------
............................................................CTGGCCCTGGGAAAGCGTA...........................................................................................................................................................................1933.000.0010.008.003.004.001.00-2.002.00----1.00-------------------------1.00-1.00---
............................................................CTGGCCCTGGGAAAGCGC............................................................................................................................................................................185.000.001.003.00----------------1.00-------------------------
............................................................CTGGCCCTGGGAAAGAGT............................................................................................................................................................................182.000.001.00-----1.00-------------------------------------
...........................................................GCTGGCCCTGGGAAAGCGT............................................................................................................................................................................192.000.00--------1.00-----------1.00-----------------------
............................................................CTGGCCCTGGGAAAGCGG............................................................................................................................................................................181.000.00---------------------------1.00----------------
..................................................................................................................................................................................................................................GTCGAGGCAGGCGGACCG......181.000.00----------------1.00---------------------------
............................................................................................................................................................................................................................TGGGAGGTCGAGGCAGGCGGGGC.......231.000.00-----1.00--------------------------------------
........................................................................................................................................................................................................................ACTTTGGGAGGTCGAGGCA...............1901.001.00-------------------------------1.00------------
..............................................................................................................GGAGGGGACTGTGGCGGTC.........................................................................................................................191.000.00-----------1.00--------------------------------
............................................................CTGGCCCTGGGAAAGCTTA...........................................................................................................................................................................191.000.00-------1.00------------------------------------
............................................................CTGGCCCTGGGAAAGAGTC...........................................................................................................................................................................191.000.00----------------------------------1.00---------
............................................................CTGGCCCTGGGAAAGCGCT...........................................................................................................................................................................191.000.00----------1.00---------------------------------
............................................................CTGGCCCTGGGAAAGCGCA...........................................................................................................................................................................191.000.00-1.00------------------------------------------
........................................................................................................................................................................................................................ACTTTGGGAGGTCGAGGCAGGCGGGCCA......281.000.00-----1.00--------------------------------------
............................................................CTGGCCCTGGGAAAGCGGC...........................................................................................................................................................................191.000.00------------1.00-------------------------------
................................................................................................................................................................................GAGAGGGCTGGGTATTGG........................................................181.000.00--------1.00-----------------------------------
............................................................CTGGCCCTGGGAAAGAGTCCC.........................................................................................................................................................................211.000.00-------------------------1.00------------------
.............................................................................................................................................................................................ATGGTAGCTCACGCCTGTA..........................................1901.001.00--------------------------1.00-----------------
.............................................................................................................................................................CCTGGATCTAAGATAGCAGGAGAGGGC..................................................................2711.001.00---------------------1.00----------------------
.......................................................................................................................................................................................................................AACTTTGGGAGGTCGAGGCAGCTGG..........251.000.00-------------1.00------------------------------
............................................................................................................................................................................................................................TGGGAGGTCGAGGCAGGCGGACCGC.....251.000.00-----1.00--------------------------------------
.............................................................................................................AGGAGGGGACTGTGGTT............................................................................................................................171.000.00---------------1.00----------------------------
........................................................................................................................................................................................................................ACTTTGGGAGGTCGAGGCAGGGTG..........241.000.00-------------1.00------------------------------
.......................................................................................................TGAGGAAGGAGGGGACGAT................................................................................................................................191.000.00------------------------------------1.00-------
............................................................CTGGCCCTGGGAAAGAGTA...........................................................................................................................................................................191.000.00-1.00------------------------------------------
............................................................CTGGCCCTGGGAAAGTGT............................................................................................................................................................................181.000.00-----------------------------1.00--------------
.....................................................................................................................................................................................................................AGAACTTTGGGAGGTCGAGGCGGGG............251.000.00---------------------------------------1.00----
............................................................CTGGCCCTGGGAAAGCGTG...........................................................................................................................................................................191.000.00----1.00---------------------------------------
.......................................................................................................TGAGGAAGGAGGGGACAGTT...............................................................................................................................201.000.00-------------------1.00------------------------
............................................................CTGGCCCTGGGAAAGCGA............................................................................................................................................................................181.000.00----------------------1.00---------------------
...........................................................................................................................................................................................................................TTGGGAGGTCGAGGCAGGCGGGCC.......241.000.00-----1.00--------------------------------------
............................................................................................................AAGGAGGGGACTGTGGCCA...........................................................................................................................191.000.00-------------------------------------1.00------
.........................................................................................................AGGAAGGAGGGGACTGTG...............................................................................................................................1820.500.50-------------------------------------------0.50

Antisense strand
CCAGGCCCTGCCCACAGGAAGAGACACAGCTATCACACTGAGCCTGCAGTGTGAGTGCAGCTGGCCCTGGGAAAGAGGGGTGTGGGGCCCTGACTCCTGGGTATGAGGAAGGAGGGGACTGTGGCCCTTGGGGAATGAGGAAACTGGAGCCTGGACTCCTGGATCTAAGATAGCAGGAGAGGGCTGGGTATGGTAGCTCACGCCTGTACTCACAGAACTTTGGGAGGTCGAGGCAGGCGGATCATCTAAG
................................................................((((......(((((.(((((..((((..(((((.......))).))..)))).))))).))))))))).....................................................................................................................
.......................................................56...........................................................................133...................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040029(GSM532914)
G026T. (cervix)		SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		TAX577740(Rovira)
total RNA. (breast)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR191419(GSM715529)
41genomic small RNA (size selected RNA from t. (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR189787SRR040011(GSM532896)
G529T. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR040031(GSM532916)
G013T. (cervix)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038859(GSM458542)
MM386. (cell line)		SRR040017(GSM532902)
G645T. (cervix)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038857(GSM458540)
D20. (cell line)
..............................................................................................................................................................................................................................CGCCTGCCTCGACCTCC........... 1703.003.00---------3.00----------------------------------
...........................................................................................................................................................................................................................TTGGGAGGTCGAGGCAGGCGGAGTAA..... 261.000.00-----------------1.00--------------------------
.........................................................................................................................................AGGAAACTGGAGCCTTCAG.............................................................................................. 191.000.00-----1.00--------------------------------------
................................................GTGTGAGTGCAGCTGATTG....................................................................................................................................................................................... 191.000.00--------------1.00-----------------------------
.........................................................................................................................................................................................................GCCTGTACTCACAGAACTA.............................. 191.000.00----------------------------1.00---------------
............................................................................................................................................................................................................................TGGGAGGTCGAGGCAGGCGGATCACAG... 271.000.00------------------------------------------1.00-
..........................................................................................................................................................................TAGCAGGAGAGGGCTCTTA............................................................. 191.000.00-----------1.00--------------------------------
..............................................................................................................................................................................................TGGTAGCTCACGCCTGTGAC........................................ 201.000.00-----------------------------------1.00--------
..................................................................................................................GGGACTGTGGCCCTTGACGA.................................................................................................................... 201.000.00-----------------------------------------1.00--
........................................................................................................................................GAGGAAACTGGAGCCTGGA............................................................................................... 191.000.00---------------------------------1.00----------