ID: uc002oam.6
GENE: HAUS5(7)
chr19:36108046-36108238+


(2)
AGO1.ip 		(4)
AGO2.ip 		(1)
AGO3.ip 		(2)
B-CELL 		(2)
BRAIN 		(5)
BREAST 		(33)
CELL-LINE 		(1)
CERVIX 		(3)
FIBROBLAST 		(2)
HEART 		(3)
HELA 		(3)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(16)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
CCTTTGGATCCCTCACGTCGGCAGCTCTGGGCCTGGAGCCCGTGGTCCTGGTAAGAGTCCTGGTCATGGGAGAAGGGGCAGGGAGCCTGGAGTCAGGCAGATGCTAGGGTCCCCCTCAGGTCCCTTCCTCCTCTTCTCCCTAGCGTGATGTCCGAACAGCCTGCACCCTCCGGGCCCAGTTCCTGCAGAACCT
...................................................................(((((((((((.((((.(((((....))))).......((((.((......)).))))))))))))))))))).....................................................
............................................................61................................................................................143................................................
SizePerfect hitTotal NormPerfect NormSRR189786SRR189782SRR189784SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189787SRR189785SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		TAX577738(Rovira)
total RNA. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040028(GSM532913)
G026N. (cervix)		SRR189783SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
...........................................................................................................................CTTCCTCCTCTTCTCCCTAGT.................................................21135.0013.00-2.002.001.00-1.004.002.002.003.00-2.002.002.00---1.00--2.00---------1.00-1.00--------1.00-1.00-1.00-----1.00-----1.001.00--1.00-----------------
...........................................................................................................................CTTCCTCCTCTTCTCCCTAG..................................................20113.0013.00-2.001.002.00-3.00---------1.00-----------------1.00---1.00----------1.00-------1.00----------------------
.................................................................ATGGGAGAAGGGGCAGGGAGC...........................................................................................................2126.006.00---1.00------2.50-------------0.50---------0.500.50-----------------------------------0.50-0.50-----
.................................................................ATGGGAGAAGGGGCAGGGAGCC..........................................................................................................2215.005.00---1.001.00----------------1.00-------------------------1.00-----1.00-------------------------
...........................................................................................................................CTTCCTCCTCTTCTCCTTAG..................................................203.000.00-3.00-----------------------------------------------------------------------------
.................................................................ATGGGAGAAGGGGCAGGGAGCCT.........................................................................................................2313.003.00---------------------------------------1.00------------1.00--1.00-----------------------
.................................................................ATGGGAGAAGGGGCAGGGAGCCTCT.......................................................................................................2512.003.002.00------------------------------------------------------------------------------
.................................................................ATGGGAGAAGGGGCAGGGAGCCTTT.......................................................................................................2512.003.00-1.00--------------------------1.00--------------------------------------------------
.................................................................ATGGGAGAAGGGGCAGGGAGCCTACT......................................................................................................2612.003.002.00------------------------------------------------------------------------------
...........................................................................................................................CTTCCTCCTCTTCTCCCTAGTAA...............................................2312.0013.00------------------1.00----------1.00-------------------------------------------------
................................................................CATGGGAGAAGGGGCAGGGAGCCCTT.......................................................................................................262.000.002.00------------------------------------------------------------------------------
.................................................................ATGGGAGAAGGGGCAGGGAGA...........................................................................................................2122.001.50------------------------------------------------------0.50----------0.50---0.50-----0.50---
.................................................................ATGGGAGAAGGGGCAGGGAGCCCT........................................................................................................2412.005.002.00------------------------------------------------------------------------------
...........................................................................................................................CTTCCTCCTCTTCTCCCTAGA.................................................2112.0013.00--------------1.00---------------------------------------------1.00------------------
.................................................................ATGGGAGAAGGGGCAGGGAG............................................................................................................2021.501.50------------------------0.50---------------------------------------0.50-----------0.50--
.................................................................ATGGGAGAAGGGGCAGGG..............................................................................................................1821.501.50-0.50--------------------0.50-----------0.50--------------------------------------------
...............................................................TCATGGGAGAAGGGGCAGGGAGCAGA........................................................................................................261.000.00-------------------1.00-----------------------------------------------------------
...........................TGGGCCTGGAGCCCGTGGTCCTGCGTG...........................................................................................................................................271.000.00---------------------1.00---------------------------------------------------------
........................................................................................................................TCCCTTCCTCCTCTTCTCCCTAG..................................................2311.001.00-1.00-----------------------------------------------------------------------------
.................................................................ATGGGAGAAGGGGCAGGGAAA...........................................................................................................2121.001.00------------------0.50----------------------------------------------------------0.50-
................................................................CATGGGAGAAGGGGCAGGGAGCCAAA.......................................................................................................261.000.00--1.00----------------------------------------------------------------------------
................................................................CATGGGAGAAGGGGCAGGGAGCCTT........................................................................................................251.000.00--------------------------------------------1.00----------------------------------
........................................................................................................................TCCCTTCCTCCTCTTCTCCCTAGC.................................................2411.001.001.00------------------------------------------------------------------------------
..........................................................................................................................................................................CGGGCCCAGTTCCTGC.......1611.001.00----------------------------------------------1.00--------------------------------
................................................................CATGGGAGAAGGGGCAGGGAGCCATT.......................................................................................................261.000.00---------------------------1.00---------------------------------------------------
.................................................................ATGGGAGAAGGGGCAGGGAGCCTTGT......................................................................................................2611.003.00-1.00-----------------------------------------------------------------------------
...........................................................................................................................CTTCCTCCTCTTCTCCCTAGCT................................................221.000.00----1.00--------------------------------------------------------------------------
.................................................................ATGGGAGAAGGGGCAGGGAGCCC.........................................................................................................2311.005.001.00------------------------------------------------------------------------------
.................................................................ATGGGAGAAGGGGCAGGGAGCCTA........................................................................................................2411.003.00-------1.00-----------------------------------------------------------------------
........................................................................................................................TCCCTTCCTCCTCTTCTCCCTAGAC................................................2511.001.001.00------------------------------------------------------------------------------
.................................................................ATGGGAGAAGGGGCAGGGAGCCAT........................................................................................................2411.005.00--1.00----------------------------------------------------------------------------
.................................................................ATGGGAGAAGGGGCAGGGAGCCAAAT......................................................................................................2611.005.00-----------------------1.00-------------------------------------------------------
..................................................GTAAGAGTCCTGGTCATG.............................................................................................................................1811.001.00--------------------------------------------------1.00----------------------------
.................................................................ATGGGAGAAGGGGCAGGGAGCCAAT.......................................................................................................2511.005.00-------------------------------------------------1.00-----------------------------
................................................................CATGGGAGAAGGGGCAGGGAGCCTAAA......................................................................................................271.000.00----1.00--------------------------------------------------------------------------
.................................................................ATGGGAGAAGGGGCAGGGAGCCA.........................................................................................................2311.005.00-------------------1.00-----------------------------------------------------------
...........................................................................................................................CTTCCTCCTCTTCTCCCTATA.................................................211.000.00--------1.00----------------------------------------------------------------------
................................................................CATGGGAGAAGGGGCAGGGAAT...........................................................................................................221.000.00----------------------1.00--------------------------------------------------------
.................................................................ATGGGAGAAGGGGCAGGGA.............................................................................................................1921.001.00-----------------------------------0.50--------------------------0.50----------------
................................................................CATGGGAGAAGGGGCAGGGAGCCAT........................................................................................................251.000.00----1.00--------------------------------------------------------------------------
................................................................CATGGGAGAAGGGGCAGGGAAAA..........................................................................................................231.000.00-------------------------1.00-----------------------------------------------------
.................................................................ATGGGAGAAGGGGCAGGGAGCAT.........................................................................................................2321.006.00------------------0.50------------------------------------------------0.50-----------
...........................................................................................................................CTTCCTCCTCTTCTCCCTAGTT................................................2211.0013.00--------------------------1.00----------------------------------------------------
...........................................................................................................................CTTCCTCCTCTTCTCCCTAGTA................................................2211.0013.00--------------1.00----------------------------------------------------------------
..................................................................................................................................................GATGTCCGAACAGCCTGCA............................1911.001.00--------------------------------------1.00----------------------------------------
.................................................................ATGGGAGAAGGGGCAGGGAGCCTAC.......................................................................................................2511.003.001.00------------------------------------------------------------------------------
...........................................................................................................................CTTCCTCCTCTTCTCCCTATTT................................................221.000.00-------------------------------1.00-----------------------------------------------
...........................................................................................................................CTTCCTCCTCTTCTCCCTAGG.................................................2111.0013.00--1.00----------------------------------------------------------------------------
..........................................................................................................................CCTTCCTCCTCTTCTCCCTAGTCA...............................................241.000.00----------------------------------------1.00--------------------------------------
.................................................................ATGGGAGAAGGGGCAGGGAGCCTT........................................................................................................2411.003.001.00------------------------------------------------------------------------------
...........................................................................................................................................................ACAGCCTGCACCCTCCGGGCCCAGTTCCTGCAG.....3311.001.00------------------------------------------1.00------------------------------------
.......ATCCCTCACGTCGGCAGCGC......................................................................................................................................................................201.000.00----------------1.00--------------------------------------------------------------
..........................................................................................................................................................AACAGCCTGCACCCTCCG.....................1811.001.00---------------1.00---------------------------------------------------------------
.................................................................ATGGGAGAAGGGGCAGGGAAT...........................................................................................................2120.501.00----------------------------------------------------------------------0.50--------
.................................................................ATGGGAGAAGGGGCAGGGAGCAAAT.......................................................................................................2520.506.00--------------------------------------------------------------------------0.50----
.................................................................ATGGGAGAAGGGGCAGGGAAAC..........................................................................................................2220.501.000.50------------------------------------------------------------------------------
.................................................................ATGGGAGAAGGGGCAGGGAACCA.........................................................................................................2320.501.00-----------------------0.50-------------------------------------------------------
................................................................CATGGGAGAAGGGGCAGGGAGCTCAT.......................................................................................................2620.500.500.50------------------------------------------------------------------------------
................................................................CATGGGAGAAGGGGCAGGGAGA...........................................................................................................2220.500.50-----------------0.50-------------------------------------------------------------
.................................................................ATGGGAGAAGGGGCAGGGAGCAA.........................................................................................................2320.506.00------------------------------------------------------0.50------------------------
.................................................................ATGGGAGAAGGGGCAGGGAGAAAA........................................................................................................2420.501.50---------------------------------------------------------------0.50---------------
................................................................CATGGGAGAAGGGGCAGGG..............................................................................................................1920.500.50------------------------------------------------------------------0.50------------
.................................................................ATGGGAGAAGGGGCAGGGAGCAAAA.......................................................................................................2520.506.00--------------------------------------------------------------------0.50----------
................................................................CATGGGAGAAGGGGCAGGGAGC...........................................................................................................2220.500.50-----------------0.50-------------------------------------------------------------
................................................................CATGGGAGAAGGGGCAGGGAG............................................................................................................2120.500.50------------------------------------------------------------------------0.50------

Antisense strand
CCTTTGGATCCCTCACGTCGGCAGCTCTGGGCCTGGAGCCCGTGGTCCTGGTAAGAGTCCTGGTCATGGGAGAAGGGGCAGGGAGCCTGGAGTCAGGCAGATGCTAGGGTCCCCCTCAGGTCCCTTCCTCCTCTTCTCCCTAGCGTGATGTCCGAACAGCCTGCACCCTCCGGGCCCAGTTCCTGCAGAACCT
...................................................................(((((((((((.((((.(((((....))))).......((((.((......)).))))))))))))))))))).....................................................
............................................................61................................................................................143................................................
SizePerfect hitTotal NormPerfect NormSRR189786SRR189782SRR189784SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189787SRR189785SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		TAX577738(Rovira)
total RNA. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040028(GSM532913)
G026N. (cervix)		SRR189783SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
......................................................................................................................GGTCCCTTCCTCCTCTTCAA....................................................... 201.000.00-----------------------------------------------------------1.00-------------------
................................................................................................................................................................CTGCACCCTCCGGGCCCAACGT........... 221.000.00------------------------------------1.00------------------------------------------
.................................................................................GGAGCCTGGAGTCAGGACCT............................................................................................ 201.000.00----------------1.00--------------------------------------------------------------
.......................................................................................................................GAAGAGGAGGAAGGGAC......................................................... 1740.250.25------------------------------------------------------------------------------0.25