ID: uc002nxi.1_intron_9_0_chr19_35504596_f
GENE: GRAMD1A(10)
chr19:35504546-35505142+


(8)
B-CELL
(7)
BRAIN
(6)
BREAST
(12)
CELL-LINE
(4)
CERVIX
(3)
HEART
(2)
HELA
(6)
LIVER
(3)
OTHER
(20)
SKIN
(1)
UTERUS
(1)
XRN.ip

Sense strand
GCCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGACGCAGACCATGGGGTGAGCGGTGGGTTGGAAGAGGGGTGGGATACTGATAGGAAGAGAGAGGAGGGCTGGGGGTGCAGTGGGAGAAGAACAGCCTGACAGATTTGGAGGGGAATGGATAGGGGGACAGGGGAGGCCTGGATGGAGGAACAGGACAGGGAGGGGAAGACGGACATGTGACAGGGAAAGAGAGACAGGGAAGAGAGGGGACAGACAGAAAGGATGAGAGACAGAAGGGATGGGAGATGGGTGGATAGATGAAGCAGCAGACAGACAGACGGACAGGACAGGTAAGAAAGCTTATGGCTCAGGCATCTGAGACAAGCCTGGCAGGGGCTGAGAGGGGCCCTCATCTGGGTGGCCCCAGGCTGCTCGCAGCTCAGCCGTGAGCCCTCGGTGCACACACCACCCCGGGTCTGCACAGGCTCTGGAATCCTTGTGGCCAGTGTGGACTTGGGAGCCCTGGGGCTGGGATGGAGGTGGCCAAGGCTGCATCGGGCCTTTCTCCACAGGCAGAGGAGGACAAGGAGGAGCAGGTAGACAGCCAGCCAGACGCCTCCTC
..........................................................................................................................................................................................................................................................................................((((...((((....((.((((((.......(((.................((((((((((..(((...((((...((((.(((....)))....(((((((((....))).)))))).)))).))))..))).))))))))))....((((....))))...))).))))))....))))))..))))..............................................................................................................................
.......................................................................................................................................................................................................................................................................................280..............................................................................................................................................................................................473..........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189784SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR040041(GSM532926)
G612T. (cervix)
SRR029124(GSM416753)
HeLa. (hela)
TAX577580(Rovira)
total RNA. (breast)
SRR040010(GSM532895)
G529N. (cervix)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR040029(GSM532914)
G026T. (cervix)
SRR040037(GSM532922)
G243T. (cervix)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM956925PAZD5SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR038853(GSM458536)
MELB. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGGAGGAGCAGGTAGAAA...................214.000.004.00--------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................AGACGGACAGGACAGGTAAGAAAGCT.....................................................................................................................................................................................................................................................................2612.002.00---1.00--------------1.00--------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCACAGGCTCTGAGGC................................................................................................................................192.000.00-------------2.00-------------------------------------------------------------
....................TCCCGAGCCAGCAGCGACGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002.00-----2.00---------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................GTGGATAGATGAAGCAGCA......................................................................................................................................................................................................................................................................................................1912.002.00----------2.00----------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................AGCAGACAGACAGACGGAC.......................................................................................................................................................................................................................................................................................1912.002.00-2.00-------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................CAGACAGACAGACGGACAGGC...................................................................................................................................................................................................................................................................................2122.000.50-------1.00------------0.50-0.50----------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGAGCAGGTAGACAGCCA...............2212.002.00------2.00--------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGCAGGTAGACAGCCA...............1912.002.00-1.00-----------------------------------1.00-------------------------------------
.....................................................................................................................................................................................................................................................CAGACAGAAAGGATGAGAG.............................................................................................................................................................................................................................................................................................................................................1911.001.00-------1.00-------------------------------------------------------------------
............................................................................................................................................................................................................................................................................AAGGGATGGGAGATGGGTGGA....................................................................................................................................................................................................................................................................................................................2111.001.00-------------------------------1.00-------------------------------------------
..................................................................................................GAGGGCTGGGGGTGCGGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00------------------------------------------------------1.00--------------------
................................................................................................................................................................................................................................................................................GATGGGAGATGGGTGTCT...................................................................................................................................................................................................................................................................................................................181.000.00---------------------------------1.00-----------------------------------------
...................................................................................................................................................................................................................................................................................................................GACAGACGGACAGGACAGGTAAG...........................................................................................................................................................................................................................................................................2311.001.00---1.00-----------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCAGTGTGGACTTGGGAGCC....................................................................................................2311.001.00-----------------1.00---------------------------------------------------------
....................TCCCGAGCCAGCAGCGACGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-----------1.00---------------------------------------------------------------
.........................................................GTGGGTTGGAAGAGGGGTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00-------------------1.00-------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................GACAGACAGACGGACAGGACAGGTAAG...........................................................................................................................................................................................................................................................................2711.001.00----------------------------------1.00----------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................AGGGGCTGAGAGGGGACC.....................................................................................................................................................................................................................181.000.00--------------------------------------------------1.00------------------------
...............................................................................................................................................................................................................................................................................................................GACAGACAGACGGACAGCCA..................................................................................................................................................................................................................................................................................201.000.00--------------1.00------------------------------------------------------------
..................TTTCCCGAGCCAGCAGCGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00-----------------------------------------------------1.00---------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAGGAGCAGGTAGACAG..................2011.001.00--1.00------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................AGACAGACAGACGGACAAT....................................................................................................................................................................................................................................................................................191.000.00------------------------------------------1.00--------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGGAGGAGCAGGTAGACAGC.................2311.001.00---------------------------------------------------------1.00-----------------
........................................................................................................TGGGGGTGCAGTGGGAGTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00----------------------------1.00----------------------------------------------
........................................................................................................................................................................................................................................................................................................................ACGGACAGGACAGGTAAGAA.........................................................................................................................................................................................................................................................................2011.001.001.00--------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................AAGGATGAGAGACAGAAGGG....................................................................................................................................................................................................................................................................................................................................2011.001.00----------------1.00----------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGGCTGGGATGGAGGAAA...............................................................................201.000.00-----------------------------------------1.00---------------------------------
............................................CATGGGGTGAGCGGTGGGTTGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00----------------------------------------1.00----------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCATCGGGCCTTTGAC.......................................................181.000.00-------------------------1.00-------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................CAGGACAGGTAAGAAAGCTTATGGC...............................................................................................................................................................................................................................................................2511.001.00------------1.00--------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................CAGACAGACGGACAGGACAGGT..............................................................................................................................................................................................................................................................................2211.001.00-------------------------------------------------------------1.00-------------
.........................................................GTGGGTTGGAAGAGGGGTGGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00------------------------------------1.00--------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGAGGAGCAGGTAGACAGCCA...............2411.001.00--------------------------------------1.00------------------------------------
............................................................................................................................................................................................................................................................................AAGGGATGGGAGATGTTTT......................................................................................................................................................................................................................................................................................................................191.000.00----------------------------------------------------1.00----------------------
................................AGCGACGCAGACCATGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00-----------------------1.00---------------------------------------------------
.............................................................................................................................................................................................................................................................................................................CAGACAGACAGACGGATATA....................................................................................................................................................................................................................................................................................201.000.00-1.00-------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................GGCTGAGAGGGGCCCTCATCTGGGTGG.........................................................................................................................................................................................................2711.001.00------------1.00--------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................TGGGTGGATAGATGAAGCAG........................................................................................................................................................................................................................................................................................................2011.001.00-------------------------------------------------1.00-------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACAAGGAGGAGCAGGTAGA.....................2211.001.00-----------------1.00---------------------------------------------------------
.........................................................GTGGGTTGGAAGAGGGGTGGGATAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................251.000.00----------------------------------------------------------------1.00----------
.................................GCGACGCAGACCATGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00------------------------1.00--------------------------------------------------
............................................................................................................................................................................CTGGATGGAGGAACAGGACAGG...................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00----1.00----------------------------------------------------------------------
...............................CAGCGACGCAGACCATGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00--1.00------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGAGGAGCAGGTAGACAG..................2111.001.00--1.00------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGAGCAGGTAGACAGCC................2111.001.00---1.00-----------------------------------------------------------------------
..............................................................................................................TGCAGTGGGAGAAGAACAGCCTGACAGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001.00----1.00----------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGGAGGAGCAGGTAGACAGCCAG..............2611.001.00--1.00------------------------------------------------------------------------
................................................................................ACTGATAGGAAGAGAGAGGAGGGCTGGGGGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3211.001.00----------------------------------------------1.00----------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCCGGGTCTGCACAGG.........................................................................................................................................1911.001.00-----------------------------------------------------------1.00---------------
...........................................................................................................................................................................................................................................................................GAAGGGATGGGAGATGGGC.......................................................................................................................................................................................................................................................................................................................191.000.00---------------------------------------------------------------1.00-----------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCTGCATCGGGCCTTTCTCCA.....................................................2411.001.00---------------------------------------1.00-----------------------------------
................................................................................................................................................................................................................................................................................................................................................................................GGGCTGAGAGGGGCCCTAACC................................................................................................................................................................................................................211.000.00---------------------------1.00-----------------------------------------------
.......................................................................................................................................................................GAGGCCTGGATGGAGGAACAGGACAGGGA.................................................................................................................................................................................................................................................................................................................................................................................................................2911.001.00---------------------1.00-----------------------------------------------------
............................................CATGGGGTGAGCGGTGGCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00--------------------------------1.00------------------------------------------
........................GAGCCAGCAGCGACGCAGACCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00------------------------------1.00--------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................CTGGCAGGGGCTGAGAGG..........................................................................................................................................................................................................................1811.001.00-------------------------------------------1.00-------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGACAAGGAGG...............................1601.001.00-----------------------------------1.00---------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGAGGAGCAGGTAGA.....................1811.001.00----1.00----------------------------------------------------------------------
.........................................................................................................................................................................................................AGACGGACATGTGACGTAC.........................................................................................................................................................................................................................................................................................................................................................................................191.000.00--------------------------1.00------------------------------------------------
.........................................................................................................................................................................................................AGACGGACATGTGACAGGGAAAGA....................................................................................................................................................................................................................................................................................................................................................................................2411.001.00---1.00-----------------------------------------------------------------------
...................................................................AGAGGGGTGGGATACAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00---------------1.00-----------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGGAGCCCTGGGCTA............................................................................................181.000.00-----------------------------1.00---------------------------------------------
..........................................................................................................................AGAACAGCCTGACAGATTTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00---------------------------------------------------1.00-----------------------
...................................................................................................................................................................................GAGGAACAGGACAGGAACA...............................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-------------------------------------------------------1.00-------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACTTGGGAGCCCGGC................................................................................................181.000.00------------------------------------------------1.00--------------------------
........................................................................GGTGGGATACTGATAGGAAGAGAGAGGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001.00-----------1.00---------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGAGGAGCAGGTAGACAGC.................2211.001.00-----------------------------------------------1.00---------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGGAGGAGCAGGTAG......................1811.001.00------------------------------------------------------------1.00--------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGCAGGTAGACAGCCAG..............2011.001.00----------------------------------------------------------1.00----------------
..............................................................................................................................................................................................................................................................................................................................................................................AGGGGCTGAGAGGGGGGGG....................................................................................................................................................................................................................191.000.00--------------------------------------------1.00------------------------------
.............................................................................................................................................................................................................................................................................................................CAGACAGACAGACGGACAGG....................................................................................................................................................................................................................................................................................2020.500.50-----0.50---------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................GAAGGGATGGGAGATGGGT.......................................................................................................................................................................................................................................................................................................................1920.500.50------------------0.50--------------------------------------------------------
.............................................................................................................................................................................................................................................................AAGGATGAGAGACAGAAG......................................................................................................................................................................................................................................................................................................................................1820.500.50---------------------0.50-----------------------------------------------------
.............................................................................................................................................................................................................................................................................................................CAGACAGACAGACGGACAGGCAG.................................................................................................................................................................................................................................................................................2320.500.50-----------------------------------------------------------------0.50---------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCAGAGGAGGACAAG...................................1730.330.33-------------------------------------------------------------------0.33-------
............................................................................................................................................................................................................................................................................................GTGGATAGATGAAGCAG........................................................................................................................................................................................................................................................................................................1730.330.33--------------------------------------------------------------------0.33------
............................................................................................................................................................................................................................................GAGAGGGGACAGACAGAA.......................................................................................................................................................................................................................................................................................................................................................1840.250.25-----------------------0.25---------------------------------------------------
...........................................................................................................................................................AGGGGGACAGGGGAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................1740.250.25---------------------------------------------------------------------0.25-----
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGGAGGACAAGGAGG...............................1840.250.25----------------------------------------------------------------------0.25----
....................................................................................................................................................AATGGATAGGGGGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................1560.170.17-------------------------------------------------------------------------0.17-
............................................................................................................................................................................................................................................................................................................GCAGACAGACAGACGGATA......................................................................................................................................................................................................................................................................................1970.140.14------------------0.14--------------------------------------------------------
............................................................................................................................................................................................................................................................................................................GCAGACAGACAGACGGA........................................................................................................................................................................................................................................................................................1770.140.14--------------------------------------------------------------------------0.14

Antisense strand
GCCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGACGCAGACCATGGGGTGAGCGGTGGGTTGGAAGAGGGGTGGGATACTGATAGGAAGAGAGAGGAGGGCTGGGGGTGCAGTGGGAGAAGAACAGCCTGACAGATTTGGAGGGGAATGGATAGGGGGACAGGGGAGGCCTGGATGGAGGAACAGGACAGGGAGGGGAAGACGGACATGTGACAGGGAAAGAGAGACAGGGAAGAGAGGGGACAGACAGAAAGGATGAGAGACAGAAGGGATGGGAGATGGGTGGATAGATGAAGCAGCAGACAGACAGACGGACAGGACAGGTAAGAAAGCTTATGGCTCAGGCATCTGAGACAAGCCTGGCAGGGGCTGAGAGGGGCCCTCATCTGGGTGGCCCCAGGCTGCTCGCAGCTCAGCCGTGAGCCCTCGGTGCACACACCACCCCGGGTCTGCACAGGCTCTGGAATCCTTGTGGCCAGTGTGGACTTGGGAGCCCTGGGGCTGGGATGGAGGTGGCCAAGGCTGCATCGGGCCTTTCTCCACAGGCAGAGGAGGACAAGGAGGAGCAGGTAGACAGCCAGCCAGACGCCTCCTC
..........................................................................................................................................................................................................................................................................................((((...((((....((.((((((.......(((.................((((((((((..(((...((((...((((.(((....)))....(((((((((....))).)))))).)))).))))..))).))))))))))....((((....))))...))).))))))....))))))..))))..............................................................................................................................
.......................................................................................................................................................................................................................................................................................280..............................................................................................................................................................................................473..........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189784SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR040041(GSM532926)
G612T. (cervix)
SRR029124(GSM416753)
HeLa. (hela)
TAX577580(Rovira)
total RNA. (breast)
SRR040010(GSM532895)
G529N. (cervix)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR040029(GSM532914)
G026T. (cervix)
SRR040037(GSM532922)
G243T. (cervix)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM956925PAZD5SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR038853(GSM458536)
MELB. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
...................................................................................................................TGGGAGAAGAACAGCAATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 192.000.00--------2.00------------------------------------------------------------------
...............CTGCGTCGCTGCTGGCTCGGGAAAGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 2711.001.00----------------1.00----------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................CCATAAGCTTTCTTACCTGTCC................................................................................................................................................................................................................................................................ 2211.001.00--------------------1.00------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................GAGCCATAAGCTTTCTTACCTGTC............................................................................................................................................................................................................................................................. 2411.001.00--------------------------------------------------------1.00------------------
................................................................GGAAGAGGGGTGGGATCCAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 201.000.00--------------1.00------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGGTGCACACACCAGGA....................................................................................................................................................... 191.000.00---------------1.00-----------------------------------------------------------
..........................................................................................................................................................................................................................CCTCTCTTCCCTGTCTCTCTTTCC................................................................................................................................................................................................................................................................................................................................................................... 2411.001.00---------------------------------------------1.00-----------------------------
..............................................AACCCACCGCTCACCCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1811.001.00------1.00--------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................TCTTACCTGTCCTGTCCGTCTGTCTGTCTGCT.......................................................................................................................................................................................................................................................................... 3211.001.00---------1.00-----------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGCCAGCCAGACATA..... 181.000.00--------------------------------------------------------------1.00------------
..........................................................................................................................................................................................................................GTCCCCTCTCTTCCCTGTCTCTCTTTCC............................................................................................................................................................................................................................................................................................................................................................... 2811.001.00---------1.00-----------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................AGACAGACAGACGGACAGGCTCT................................................................................................................................................................................................................................................................................ 230.500.00----------------------0.50----------------------------------------------------
..........................................................................................................................................................................................................................................................................................................TCCGTCTGTCTGTCTGCTG........................................................................................................................................................................................................................................................................................ 1920.500.50-----0.50---------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................CCTGTCCGTCTGTCTGTCT.................................................................................................................................................................................................................................................................................... 1920.500.50-------------------0.50-------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................AGACAGACAGACGGACAGGTTCT................................................................................................................................................................................................................................................................................ 230.500.00----------------------0.50----------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................CGGCTGAGCTGCGAG................................................................................................................................................................................ 1520.500.50------------------------------------------------------------------0.50--------
............................................................................................................................................................................................................................................................................................................................................................................................CCACCCAGATGAGGGC......................................................................................................................................................................................................... 1630.330.33-------0.33-------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................CTGCCAGGCTTGTCTC..................................................................................................................................................................................................................................... 1650.200.20------------------------------------------------------------------------0.20--
...........................................................................................................................................................................................................................................................................................................CCGTCTGTCTGTCTGCT......................................................................................................................................................................................................................................................................................... 1750.200.20-----------------------------------------------------------------------0.20---
.................................................................................................................................................................................................................................................................................................................CCTGTCCGTCTGTCTG.................................................................................................................................................................................................................................................................................... 1680.120.12------------------------0.12--------------------------------------------------