ID: uc002nsa.1_intron_3_0_chr19_28952405_r.3p
GENE: (6)
chr19:28952355-28952604-


(19)
B-CELL
(13)
BRAIN
(15)
BREAST
(22)
CELL-LINE
(6)
CERVIX
(5)
HEART
(1)
KIDNEY
(13)
LIVER
(1)
OTHER
(11)
SKIN
(1)
UTERUS
(1)
XRN.ip

Sense strand
TGGAGGCCTCACAGATGTGACCCTGGATCCTAAACCTTACTGAGATACTGCCCAGCCCATGGACTGCCTCCCAGGGTCCAGCTGTGTGATTATCTCAACCTTCCTTTATTTTTTATTCCATCTCCCTCTTTCTAGTTTCTGATTTGAAAGTGGCTGATTTGGGGAATGAGTTCTGAGCACTCTGTGGGTTATTACTGTAGAAACCATCCTCCTGGCTGTCTCACCATCAGCGCCACCTCTCCGTGGGTCT
................................................................................................................((((((((((..((.(((((.((((...)))).))))).))..)))....))))))).................................................................................
............................................................................................93..........................................................................169...............................................................................
SizePerfect hitTotal NormPerfect NormSRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR189782SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR029129(GSM416758)
SW480. (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
TAX577744(Rovira)
total RNA. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
TAX577743(Rovira)
total RNA. (breast)
SRR040027(GSM532912)
G220T. (cervix)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR189784SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR040028(GSM532913)
G026N. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR037943(GSM510481)
293DcrTN. (cell line)
GSM532874(GSM532874)
G699T. (cervix)
SRR040036(GSM532921)
G243N. (cervix)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR038855(GSM458538)
D10. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040039(GSM532924)
G531T. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR191634(GSM715744)
98genomic small RNA (size selected RNA from t. (breast)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR029126(GSM416755)
143B. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
TAX577579(Rovira)
total RNA. (breast)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR040035(GSM532920)
G001T. (cervix)
SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)
TAX577745(Rovira)
total RNA. (breast)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
..................................................................................................................................................AAAGTGGCTGATTTGCTTT.....................................................................................19234.000.0054.0013.0021.0015.00-5.009.009.002.0012.003.004.007.006.006.004.002.003.002.005.002.002.004.001.003.004.00-2.001.00--3.001.002.00-1.00--1.001.00-1.001.002.00-1.00-1.001.00-1.00-1.001.00---1.001.00-----1.00----1.00-1.00--1.00-1.00-----1.001.00-1.00---1.001.00----1.00------1.00------
..................................................................................................................................................AAAGTGGCTGATTTGCTT......................................................................................1849.000.0010.001.00-10.00-8.00--1.00-4.00---1.00-----------------1.00-1.00-----1.00-1.00---2.001.00-1.00----------1.00-------1.00---------1.00-------------1.001.00-------1.00-------
..................................................................................................................................................AAAGTGGCTGATTTGCATC.....................................................................................1922.000.00----22.00--------------------------------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGCCTT.....................................................................................1912.000.004.003.00-----1.00---1.00---1.00-----------------1.00---------------------------------------1.00-----------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGCAA......................................................................................1811.000.007.00-------------1.00-1.00----------1.001.00--------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGCGTA.....................................................................................1910.000.001.00--2.00-1.00----2.00-1.00----1.00---------------------1.00----------------------------------------------1.00----------------------
..................................................................................................................................................AAAGTGGCTGATTTGCCT......................................................................................189.000.00-----1.00----1.00----------1.00-1.00-------------------------1.00-------------1.00-------------1.00------1.00-------------1.00----------
...................................................................................................................................................AAGTGGCTGATTTGGGTTC....................................................................................198.000.00-2.004.00-----1.00----1.00-----------------------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGGGTT.....................................................................................197.000.00-2.001.00----------1.001.00-------------------------1.00---1.00----------------------------------------------------------------
...................................................................................................................................................AAGTGGCTGATTTGGTTT.....................................................................................187.000.00-2.00-----------1.00-1.001.00-1.00-----------------------------------------------------1.00------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGCTTA.....................................................................................196.000.00----------------1.001.00--1.00---------2.00---1.00--------------------------------------------------------------------------
...................................................................................................................................................AAGTGGCTGATTTGGTTTC....................................................................................196.000.00--1.00----1.001.00--2.001.00------------------------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGATC......................................................................................186.000.00----6.00--------------------------------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGGTTT.....................................................................................196.000.00-1.001.00---1.00-1.00---------1.00--1.00---------------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGCGGT.....................................................................................196.000.00-2.002.00---------1.00-------------------------------1.00----------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGCGCA.....................................................................................195.000.00-----1.00------------1.00----1.00--------------1.00---------1.00------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGCGC......................................................................................185.000.00---2.00-------------------2.00--------------------------------------------------------1.00----------------------------
...................................................................................................................................................AAGTGGCTGATTTGGGTT.....................................................................................184.000.001.001.00------1.00-------------------------------------------------------------------------------1.00--------------------
..................................................................................................................................................AAAGTGGCTGATTTGGGTTC....................................................................................204.000.00-1.001.00-----1.00--------------------------------1.00-------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGCGCC.....................................................................................194.000.00---1.00-----------------------1.00-------------------------------1.00---------------------------1.00---------------------
...................................................................................................................................................AAGTGGCTGATTTGGGTTT....................................................................................193.000.00-1.001.00------------1.00---------------------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGTTTT.....................................................................................193.000.00-------2.00----------1.00------------------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGGGTTT....................................................................................203.000.00------1.00-1.00-----------1.00----------------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGCTTC.....................................................................................193.000.00-1.00----------------------------1.00------1.00-----------------------------------------------------------------------
...................................................................................................................................................AAGTGGCTGATTTGGTTTT....................................................................................192.000.00-----------1.00---1.00---------------------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGTTT......................................................................................182.000.00----------1.00-----1.00--------------------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGCTC......................................................................................182.000.00---2.00---------------------------------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGCCTA.....................................................................................192.000.00--1.00-------------------------------------------------------------------------------------------1.00--------------
..................................................................................................................................................AAAGTGGCTGATTTGCCTC.....................................................................................192.000.00----------------------------2.00--------------------------------------------------------------------------------
...................................................................................................................................................AAGTGGCTGATTTGGGTTCA...................................................................................202.000.00------1.00-----------------1.00------------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGAAAA.....................................................................................192.000.00--------------------------------1.00----------------------------------------------------------------1.00-----------
..................................................................................................................................................AAAGTGGCTGATTTGGGGTTA...................................................................................212.000.00-1.00------------------1.00----------------------------------------------------------------------------------------
....................................................................................................................................................AGTGGCTGATTTGGGTTC....................................................................................182.000.00-1.001.00----------------------------------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGGTTTA....................................................................................202.000.00--1.00-----1.00----------------------------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGGGTTA....................................................................................202.000.00--------1.00--1.00-------------------------------------------------------------------------------------------------
...................................................................................................................................................AAGTGGCTGATTTGGCTT.....................................................................................181.000.00-----------1.00-------------------------------------------------------------------------------------------------
...................................................................................................................................................AAGTGGCTGATTTGGGTTA....................................................................................191.000.00-----------------1.00-------------------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGTATT.....................................................................................191.000.00------------------------1.00------------------------------------------------------------------------------------
...............................................................................................................................................TTGAAAGTGGCTGATTTCG........................................................................................191.000.00--------------------------1.00----------------------------------------------------------------------------------
...................................................................................................................................................AAGTGGCTGATTTGGGGTG....................................................................................191.000.00-------------------1.00-----------------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGGGGTCA...................................................................................211.000.00-1.00-----------------------------------------------------------------------------------------------------------
....................................................................................................................................................AGTGGCTGATTTGGGTTCT...................................................................................191.000.00----------------1.00--------------------------------------------------------------------------------------------
................................................................................................................................................TGAAAGTGGCTGATTTGCG.......................................................................................191.000.00-------------------------------------------------------1.00-----------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGTTTC.....................................................................................191.000.00-1.00-----------------------------------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGCGG......................................................................................181.000.00-1.00-----------------------------------------------------------------------------------------------------------
...................................................................................................................................................AAGTGGCTGATTTGGGTTTA...................................................................................201.000.00---------------------------------------------------------------------------------------------------1.00---------
.....................................TACTGAGATACTGCCCAGAG.................................................................................................................................................................................................201.000.00--------------------------1.00----------------------------------------------------------------------------------
.................................................................................................................................................GAAAGTGGCTGATTTGCGT......................................................................................191.000.00---------------------------------------------------------------------------1.00---------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGCGCT.....................................................................................191.000.00-----------------------------------------------------------------1.00-------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGGTT......................................................................................181.000.00-1.00-----------------------------------------------------------------------------------------------------------
.................................................................................................ACCTTCCTTTATTTTTTTTCA....................................................................................................................................211.000.00--------------------------------------------------------------------------------------------------------1.00----
..................................................................................................................................................AAAGTGGCTGATTTGCGTG.....................................................................................191.000.00---1.00---------------------------------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGGGGT.....................................................................................191.000.00--------------------1.00----------------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGGATT.....................................................................................191.000.00------1.00------------------------------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGGTTTT....................................................................................201.000.00-1.00-----------------------------------------------------------------------------------------------------------
..................................................................................................CCTTCCTTTATTTTTCACT.....................................................................................................................................191.000.00----------------------------------------------------------------------1.00--------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGCGAA.....................................................................................191.000.00---1.00---------------------------------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGCGA......................................................................................181.000.00-------------------------------------------------------------------------------------------1.00-----------------
......................................ACTGAGATACTGCCCAGAC.................................................................................................................................................................................................191.000.00-------------------------------------1.00-----------------------------------------------------------------------
.....................................................................................................TCCTTTATTTTTTATCTAA..................................................................................................................................191.000.00-------------------------------------------------------------------------------------------------------1.00-----
..................................................................................................................................................AAAGTGGCTGATTTGTGTA.....................................................................................191.000.00------------------------------------1.00------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGAGTT.....................................................................................191.000.00----------------------1.00--------------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGCAAA.....................................................................................191.000.00------------------------------------------------------------------1.00------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGCTTG.....................................................................................191.000.00---1.00---------------------------------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGGGTTCA...................................................................................211.000.00--------1.00----------------------------------------------------------------------------------------------------
..................................................................................................................................................................GGAATGAGTTCTGAGCACTCTGTGGG..............................................................2611.001.00-----------------------------1.00-------------------------------------------------------------------------------
...................................................................................................................................................AAGTGGCTGATTTGGATTT....................................................................................191.000.00--1.00----------------------------------------------------------------------------------------------------------
..................................................................................................................................................AAAGTGGCTGATTTGAACA.....................................................................................191.000.00-------------------------------------------------------------1.00-----------------------------------------------
..............................................................................CAGCTGTGTGATTATCTCACCT......................................................................................................................................................221.000.00------------------------------------------------------1.00------------------------------------------------------
.......................................CTGAGATACTGCCCAGACTC...............................................................................................................................................................................................2030.330.33-----------------------------------------------------------------------------------------------------------0.33-
.......................................CTGAGATACTGCCCAG...................................................................................................................................................................................................1630.330.33----------------------------------------------------------------------------------------------------------0.33--
......................................ACTGAGATACTGCCC.....................................................................................................................................................................................................1550.200.20----------------------------------------------------0.20--------------------------------------------------------

Antisense strand
TGGAGGCCTCACAGATGTGACCCTGGATCCTAAACCTTACTGAGATACTGCCCAGCCCATGGACTGCCTCCCAGGGTCCAGCTGTGTGATTATCTCAACCTTCCTTTATTTTTTATTCCATCTCCCTCTTTCTAGTTTCTGATTTGAAAGTGGCTGATTTGGGGAATGAGTTCTGAGCACTCTGTGGGTTATTACTGTAGAAACCATCCTCCTGGCTGTCTCACCATCAGCGCCACCTCTCCGTGGGTCT
................................................................................................................((((((((((..((.(((((.((((...)))).))))).))..)))....))))))).................................................................................
............................................................................................93..........................................................................169...............................................................................
SizePerfect hitTotal NormPerfect NormSRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR189782SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR029129(GSM416758)
SW480. (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
TAX577744(Rovira)
total RNA. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
TAX577743(Rovira)
total RNA. (breast)
SRR040027(GSM532912)
G220T. (cervix)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR189784SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR040028(GSM532913)
G026N. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR037943(GSM510481)
293DcrTN. (cell line)
GSM532874(GSM532874)
G699T. (cervix)
SRR040036(GSM532921)
G243N. (cervix)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR038855(GSM458538)
D10. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040039(GSM532924)
G531T. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR191634(GSM715744)
98genomic small RNA (size selected RNA from t. (breast)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR029126(GSM416755)
143B. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
TAX577579(Rovira)
total RNA. (breast)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR040035(GSM532920)
G001T. (cervix)
SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)
TAX577745(Rovira)
total RNA. (breast)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
......................................................GCCCATGGACTGCCTATAT................................................................................................................................................................................. 194.000.00--------------------------1.00--------1.00---------1.00----------------1.00----------------------------------------------
....................................................CAGCCCATGGACTGCATAC................................................................................................................................................................................... 191.000.00--------------------------------------------------1.00----------------------------------------------------------
..............................................................TGGACCCTGGGAGGCAGT.......................................................................................................................................................................... 1811.001.00----------------------------------------------------------------------------------------------------1.00--------
.....................CCTGGATCCTAAACCTC.................................................................................................................................................................................................................... 171.000.00-----------------------------1.00-------------------------------------------------------------------------------
....................................................CAGCCCATGGACTGCATAA................................................................................................................................................................................... 191.000.00-------------------------------------------------------------------1.00-----------------------------------------
...............................................................................................................................................................................................................................CCATCAGCGCCACCTCTCCGT...... 211.000.00------------------------------------------------------------------------------------------------1.00------------
.....................................................AGCCCATGGACTGCCTAG................................................................................................................................................................................... 181.000.00--------------------------1.00----------------------------------------------------------------------------------
......................................................GCCCATGGACTGCCTATTA................................................................................................................................................................................. 191.000.00---------------------------------------------------1.00---------------------------------------------------------
.....................................................AGCCCATGGACTGCCTTAT.................................................................................................................................................................................. 191.000.00---------------------------------------------------1.00---------------------------------------------------------
.....................................................AGCCCATGGACTGCCTTTT.................................................................................................................................................................................. 191.000.00------------------------------------1.00------------------------------------------------------------------------
..................................................................................................................ATTCCATCTCCCTCTGGAT..................................................................................................................... 191.000.00---------------------1.00---------------------------------------------------------------------------------------
................................................................................................................TTATTCCATCTCCCTTTT........................................................................................................................ 181.000.00---------------------------------------------------------------------------------1.00---------------------------
..........................................................................................................................................................................................................ACCATCCTCCTGGCTGTGGGT........................... 211.000.00-----------------------------1.00-------------------------------------------------------------------------------
..............................................................................................................................TCTTTCTAGTTTCTGACA.......................................................................................................... 181.000.00-------------------------------------------------------------------------------1.00-----------------------------
..................................................................................................................................................AAAGTGGCTGATTTGAATA..................................................................................... 191.000.00--------------------------------------------------------1.00----------------------------------------------------
.............................................CATGGGCTGGGCAGTA............................................................................................................................................................................................. 1620.500.50---------------------------------------------------------------------------------------------------------0.50---
.................................................................GCCTCCCAGGGTCCAGCTCAGG................................................................................................................................................................... 220.330.00-----------------------------0.33-------------------------------------------------------------------------------
.................................................................AGCTGGACCCTGGGAGGC....................................................................................................................................................................... 1830.330.33------0.33------------------------------------------------------------------------------------------------------
.................................................................................................................AGAGGGAGATGGAATA......................................................................................................................... 1670.140.14------------------------------------------------------------------------------------------------------------0.14