ID: uc002nqt.2_intron_1_0_chr19_22585687_r.5p
GENE: ZNF98(2)
chr19:22585988-22586237-


(1)
B-CELL 		(2)
BRAIN 		(1)
BREAST 		(12)
CELL-LINE 		(2)
CERVIX 		(1)
HEART 		(2)
LIVER 		(2)
OTHER 		(1)
SKIN

Sense strand
TTTATATAGGAATGTGATGTTAGAGAACTACAGAAACCTGGTCTTTGTGGGTGAGGATAACTTCAATATACAATTCCCTAATATACCCTATAAATTTTATTTCTCTTTTTTGTAGAATGGTTTTTTTGGTAGTTTATGCTTTCAGATCTCTGTTTTTTTTTTTTGTTTTTTTTTTTTAACTTCAAGATTTGTCTATGTAGAAAAGAATTTCAAGATGTTTCATTTTGATCTGAACTTTCCACACTCCTGA
.................................................................................................................(((((((....(((((.(((....))).)))))...)))))))..............................................................................................
......................................................................................................103.......................................................................................193.......................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189782SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		GSM532930(GSM532930)
G702T. (cervix)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR343335SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		GSM532929(GSM532929)
G702N. (cervix)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)
.............................................................................................................................................................................................................AATTTCAAGATGTTTACAT..........................1911.000.00---8.00----3.00-----------------
.........................................................................................................................................................TTTTTTTTTTTGTTTTTTTTTTTTCAG......................................................................273.000.001.00-----1.00------1.00------------
......................................................................................................................................................................TTTTTTTTTTTAACTTCAATCTG.............................................................232.000.00------1.00-----1.00-------------
......................................................................................................................................................TGTTTTTTTTTTTTGTTTTTTGCGG...........................................................................252.000.002.00-------------------------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTTTTCG.......................................................................272.000.00--2.00-----------------------
..........................................................................................................................................................TTTTTTTTTTGTTTTTTTTTTTTCCCT.....................................................................272.000.002.00-------------------------
.............................................................................................................................................................TTTTTTTGTTTTTTTTTTTTAACTATTT.................................................................282.000.002.00-------------------------
.......................................................................................................................................................GTTTTTTTTTTTTGTTTTTTTTTCTGG........................................................................272.000.001.001.00------------------------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTTTCAAG......................................................................281.000.00--1.00-----------------------
......................................................................................................................................................TGTTTTTTTTTTTTGTTTTTTTTTTCTGC.......................................................................291.000.001.00-------------------------
...........................................................................................................TTTTGTAGAATGGTTTTAAA...........................................................................................................................201.000.00-----------------1.00--------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTTTTAGACG....................................................................301.000.001.00-------------------------
.........................................................................................................................................................TTTTTTTTTTTGTTTTTTTTTTTTAACCAAG..................................................................311.000.00--1.00-----------------------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTTTACTT......................................................................281.000.00---------1.00----------------
.......................................................................................................................................................................TTTTTTTTTTAACTTCAATCTG.............................................................221.000.00------------1.00-------------
............................................................................................................................................................TTTTTTTTGTTTTTTTTTTTTCATT.....................................................................251.000.001.00-------------------------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTCTAG........................................................................261.000.00-1.00------------------------
......................................................................................................................................................TGTTTTTTTTTTTTGTTTTTTTTTCCCC........................................................................281.000.00-1.00------------------------
......................................................................................................................................................TGTTTTTTTTTTTTGTTTTTTTTTTCGCG.......................................................................291.000.001.00-------------------------
......................................................................................................................................................TGTTTTTTTTTTTTGTGCAG................................................................................201.000.00---1.00----------------------
....................................................................................................................................................TCTGTTTTTTTTTTTTGTTTTTTTTTGGTT........................................................................301.000.00-1.00------------------------
....................................................................................................................................................TCTGTTTTTTTTTTTTGTTTTTTTTTTTTGCG......................................................................321.000.001.00-------------------------
....................................................................................................................................................TCTGTTTTTTTTTTTTGTTTTAGGC.............................................................................251.000.00-1.00------------------------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTTTTAACT.....................................................................2911.001.00-1.00------------------------
....................................................................................................................................................TCTGTTTTTTTTTTTTGTTTTTTTTGTT..........................................................................281.000.001.00-------------------------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTTTCGC.......................................................................271.000.001.00-------------------------
............................................................................................................................................................TTTTTTTTGTTTTTTTTTTTTCGGC.....................................................................251.000.001.00-------------------------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTCGGC........................................................................261.000.001.00-------------------------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTTTTCCTC.....................................................................291.000.001.00-------------------------
...........................................................................................................................................................TTTTTTTTTGTTTTTTTTTTTTCGG......................................................................251.000.001.00-------------------------
......................................................................................................................................................TGTTTTTTTTTTTTGTTTTTTTCGAG..........................................................................261.000.001.00-------------------------
.........................................................................................................................................................TTTTTTTTTTTGTTTTTTTTTTTTCGGC.....................................................................281.000.001.00-------------------------
......................................................................................................................................................TGTTTTTTTTTTTTGTTTTTGGCT............................................................................241.000.00-1.00------------------------
......................................................................................................................................................TGTTTTTTTTTTTTGTTTTTTTTTATTT........................................................................281.000.00--1.00-----------------------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTTTTATTGT....................................................................301.000.00---1.00----------------------
..........................................................................................................................................................TTTTTTTTTTGTTTTTTTTTTTTCTCC.....................................................................271.000.001.00-------------------------
.........................................................................................................................................................TTTTTTTTTTTGTTTTTTTTTTTTCTTG.....................................................................281.000.00--1.00-----------------------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTTTCTCG......................................................................281.000.001.00-------------------------
..........................................................................................................................................................TTTTTTTTTTGTTTTTTTTTTTTACCG.....................................................................271.000.001.00-------------------------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTTTTATTTT....................................................................301.000.00-1.00------------------------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTCCG.........................................................................251.000.001.00-------------------------
...........................................................................................................................................................TTTTTTTTTGTTTTTTTTTTTCGGG......................................................................251.000.001.00-------------------------
..................................................................................................................................................TCTCTGTTTTTTTTTTTTGTTTTTTTTTTTTTG.......................................................................331.000.001.00-------------------------
....................................................................................................................................................TCTGTTTTTTTTTTTTGTTTTTTTTTGGC.........................................................................291.000.001.00-------------------------
...........................................................................................................................................................TTTTTTTTTGTTTTTTTTTTTTAACTTAG..................................................................291.000.00--1.00-----------------------
...........................................................................................................................................................TTTTTTTTTGTTTTTTTTTTTTAACAGG...................................................................281.000.001.00-------------------------
....................................................................................................................................................TCTGTTTTTTTTTTTTGTTTTTTGCG............................................................................261.000.001.00-------------------------
.................................................................................................................................................ATCTCTGTTTTTTTTTTTTCTCC..................................................................................231.000.00-1.00------------------------
.....................................................................................................................................................CTGTTTTTTTTTTTTGTTTTTTCTCC...........................................................................261.000.001.00-------------------------
...........................................................................................AAATTTTATTTCTCTTTTTTCC.........................................................................................................................................221.000.00--1.00-----------------------
.................................................................................................................................................ATCTCTGTTTTTTTTTTTTTGGC..................................................................................231.000.001.00-------------------------
.........................................................................................................................................................TTTTTTTTTTTGTTTTTTTTTTTCGGC......................................................................271.000.001.00-------------------------
......................GAGAACTACAGAAACCTGGTAA..............................................................................................................................................................................................................221.000.00-----------1.00--------------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTTTTATTG.....................................................................291.000.00---------1.00----------------
....................................................................................................................................................TCTGTTTTTTTTTTTTGTTTTGGGT.............................................................................251.000.00-1.00------------------------
...........................................................................................................................TTTTGGTAGTTTATGCTAAGG..........................................................................................................211.000.001.00-------------------------
....................................................................................................................................................TCTGTTTTTTTTTTTTGTTTTATTG.............................................................................251.000.00--1.00-----------------------
....................................................................................................................................................TCTGTTTTTTTTTTTTGTTTTGTGT.............................................................................251.000.001.00-------------------------
..........................................................................................................................................................TTTTTTTTTTGTTTTTTTTTTTCCGG......................................................................261.000.00--1.00-----------------------
..........................................................................................................................................................TTTTTTTTTTGTTTTTTTTTTTTCGC......................................................................261.000.001.00-------------------------
.................................................................................................................................................ATCTCTGTTTTTTTTAATC......................................................................................191.000.001.00-------------------------
.........................................................................................................................................................TTTTTTTTTTTGTTTTTTTTTTTCCGG......................................................................271.000.001.00-------------------------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTTTCAAC......................................................................281.000.00--1.00-----------------------
.................................................................................................................................................ATCTCTGTTTTTTTTCCTG......................................................................................191.000.001.00-------------------------
...........................................................................................................TTTTGTAGAATGGTTTTATAC..........................................................................................................................211.000.00--------------1.00-----------
...........................................................................................................................................................TTTTTTTTTGTTTTTTTTTTTTCGTG.....................................................................261.000.00-1.00------------------------
....................................................................................................................................................TCTGTTTTTTTTTTTTGTTTTTTTTTTTTGTG......................................................................321.000.00-1.00------------------------
......................................................................................................................................................TGTTTTTTTTTTTTGTTTTTTCAC............................................................................241.000.00-1.00------------------------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTTTTCCG......................................................................281.000.001.00-------------------------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTTTCGGC......................................................................281.000.001.00-------------------------
......................................................................................................................................................TGTTTTTTTTTTTTGTTTTTTTTTTTTAATTTA...................................................................331.000.00------1.00-------------------
......................................................................................................................................................TGTTTTTTTTTTTTGTTTTTTTTTTTTCAG......................................................................301.000.00------1.00-------------------
..........................................................................................................................................................TTTTTTTTTTGTTTTTTTTTTTTAAAGTT...................................................................291.000.00--1.00-----------------------
......................................................................................................................................................TGTTTTTTTTTTTTGTTTTTTTTTTCCTT.......................................................................291.000.001.00-------------------------
.........................................................................................................................................................TTTTTTTTTTTGTTTTTTTTTTTTAACCAC...................................................................301.000.00--1.00-----------------------
.................TGTTAGAGAACTACAGAAACCGGCC................................................................................................................................................................................................................251.000.00-1.00------------------------
.....................................................................................................................................................................TTTTTTTTTTTTAACTTCAATCAG.............................................................241.000.00-------------1.00------------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTTATT........................................................................261.000.001.00-------------------------
......................................................................................................................................................TGTTTTTTTTTTTTGTTTTTTTCTCT..........................................................................261.000.001.00-------------------------
......................................................................................................................................................TGTTTTTTTTTTTTGTTTTTTTTTTTCTGG......................................................................301.000.00--1.00-----------------------
.........................................................................................................................................................TTTTTTTTTTTGTTTTTTTTTTTTAAATG....................................................................291.000.00--1.00-----------------------
..............................................................................................................................................................TTTTTTGTTTTTTTTTTTTAACTTAGC.................................................................271.000.00-1.00------------------------
......................................................................................................................................................TGTTTTTTTTTTTTGTTTTTTTTTGGC.........................................................................271.000.001.00-------------------------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTTTCTGG......................................................................281.000.00--1.00-----------------------
.........................................................................................................................................................TTTTTTTTTTTGTTTTTTTTTTTCAAG......................................................................271.000.00-1.00------------------------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTCTCC........................................................................261.000.00-1.00------------------------
......................................................................................................................................................TGTTTTTTTTTTTTGTTTTTTTTTTTTATTC.....................................................................311.000.001.00-------------------------
...............................................................................................................................................................TTTTTGTTTTTTTTTTTTAACCTT...................................................................241.000.001.00-------------------------
......................................TGGTCTTTGTGGGTGAGGATA...............................................................................................................................................................................................2111.001.00---------------1.00----------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTTTCCAG......................................................................281.000.00-1.00------------------------
...........................................................................................................................................................TTTTTTTTTGTTTTTTTTTTTTAAGC.....................................................................261.000.001.00-------------------------
............................................................................................................................................................TTTTTTTTGTTTTTTTTTTTTCACT.....................................................................251.000.00--1.00-----------------------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTTTATC.......................................................................271.000.001.00-------------------------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTTTAACC......................................................................281.000.001.00-------------------------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTTTTAGTCC....................................................................301.000.001.00-------------------------
.......................................................................................................................................................GTTTTTTTTTTTTGTTTTTTTTCTG..........................................................................251.000.001.00-------------------------
......................................................................................................................................................TGTTTTTTTTTTTTGTTTTTTTTTTTTAATG.....................................................................311.000.00--1.00-----------------------
..........................................................................................................................................................TTTTTTTTTTGTTTTTTTTTTTTCAGC.....................................................................271.000.001.00-------------------------
....................................................................................................................................................TCTGTTTTTTTTTTTTGTTTTTTTTCGG..........................................................................281.000.001.00-------------------------
...........................................................................................................................................................TTTTTTTTTGTTTTTTTTTTTTCGCC.....................................................................261.000.001.00-------------------------
.....................................................................................................................................................CTGTTTTTTTTTTTTGTTTTTTTTTTTCAG.......................................................................301.000.00--1.00-----------------------
....................................................................................................................................................TCTGTTTTTTTTTTTTGTTTTTTTTTCT..........................................................................281.000.00--1.00-----------------------
....................................................................................................................................................TCTGTTTTTTTTTTTTGTTTTTTTTTGC..........................................................................281.000.001.00-------------------------
......................................................................................................................................................TGTTTTTTTTTTTTGTTTTTTTTCTCC.........................................................................271.000.001.00-------------------------
............................................................................................................................................................TTTTTTTTGTTTTTTTTTTTTAACTTCTGAG...............................................................311.000.001.00-------------------------
...........................................................................................................................................................TTTTTTTTTGTTTTTTTTTTTTCATG.....................................................................261.000.001.00-------------------------
..............................................................................................................................................................TTTTTTGTTTTTTTTTTTTAACTGC...................................................................251.000.00-1.00------------------------
......................................................................................................................................................TGTTTTTTTTTTTTGTTTTTTTTTTTTCG.......................................................................291.000.001.00-------------------------
....................................................................................................................................................TCTGTTTTTTTTTTTTGTTTTTTTTAT...........................................................................271.000.001.00-------------------------
..........................................................................................................................................................TTTTTTTTTTGTTTTTTTTTTTCCTC......................................................................261.000.00-1.00------------------------
........................................................................................................................................................................................AGATTTGTCTATGTAGA.................................................1720.500.50-----------------------0.50--

Antisense strand
TTTATATAGGAATGTGATGTTAGAGAACTACAGAAACCTGGTCTTTGTGGGTGAGGATAACTTCAATATACAATTCCCTAATATACCCTATAAATTTTATTTCTCTTTTTTGTAGAATGGTTTTTTTGGTAGTTTATGCTTTCAGATCTCTGTTTTTTTTTTTTGTTTTTTTTTTTTAACTTCAAGATTTGTCTATGTAGAAAAGAATTTCAAGATGTTTCATTTTGATCTGAACTTTCCACACTCCTGA
.................................................................................................................(((((((....(((((.(((....))).)))))...)))))))..............................................................................................
......................................................................................................103.......................................................................................193.......................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189782SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		GSM532930(GSM532930)
G702T. (cervix)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR343335SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		GSM532929(GSM532929)
G702N. (cervix)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)
.........................................................................................................................................................AAAAAAAAAAACAAAAAAAAAAA.......................................................................... 2303.003.00----3.00---------------------
.....................AGAGAACTACAGAAACCTGGG................................................................................................................................................................................................................ 212.000.00-------2.00------------------
......................................................................................................................................................TGTTTTTTTTTTTTGTTTTTTTTTTCA......................................................................... 272.000.00-----1.00----1.00---------------
.........................................................................................................................................................TTTTTTTTTTTGTTTTTTTTTTTTGCC...................................................................... 271.000.00--------------------1.00-----
.....................AGAGAACTACAGAAACCTGG................................................................................................................................................................................................................. 201.000.00-------1.00------------------
.....................AGAGAACTACAGAAACCTG.................................................................................................................................................................................................................. 191.000.00----------------1.00---------
...........................................................................................................................................................................................................................................TTTCCACACTCCTGAAAG 181.000.00---------------------1.00----
.......................................................................................................................................................AAAAAAACAAAAAAAAAAAAC.............................................................................. 2101.001.00----1.00---------------------
.................................................................................................................................................ATCTCTGTTTTTTTTTTGAA..................................................................................... 201.000.00----------------------1.00---
......................................................................................................................................................TGTTTTTTTTTTTTGTTTTTTTTTCGA......................................................................... 271.000.00-----1.00--------------------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTTTTGT....................................................................... 271.000.00------------------1.00-------
.....................................................................................................................................................CTGTTTTTTTTTTTTGTTTTTTTTTTA.......................................................................... 271.000.00-----1.00--------------------
......................................................................................................................................TATGCTTTCAGATCTTAAG................................................................................................. 191.000.00-----------1.00--------------
......................................................................................................................................................AAAACAAAAAAAAAAAACA................................................................................. 1901.001.00----1.00---------------------
..........................................................................................................................................................TTTTTTTTTTGTTTTTTTTTTTTTAGA..................................................................... 271.000.00-----1.00--------------------
......................................................................................................................................................TGTTTTTTTTTTTTGTTTTTTTTCAAT......................................................................... 271.000.00----------1.00---------------
........................................................................................................................................................TTTTTTTTTTTTGTTTTTTTTTTTTA........................................................................ 261.000.00-------------------1.00------
........................................................................................................................................................GTTAAAAAAAAAAAACAAAAAAAAAAAA...................................................................... 2830.330.33------------------------0.33-
.........................................................................................................................................................GTTAAAAAAAAAAAACAAAAAAAAAAA...................................................................... 2740.250.25-------------------------0.25