ID: uc002nng.2_intron_14_0_chr19_19766049_r
GENE: (11)
chr19:19765999-19766174-


(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(2)
AGO2.ip 		(27)
B-CELL 		(5)
BRAIN 		(15)
BREAST 		(52)
CELL-LINE 		(2)
CERVIX 		(1)
FIBROBLAST 		(4)
HEART 		(1)
HELA 		(3)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(34)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
CGAGCTGTCCCTGGCCGTCAACACCTCCCTCATCGCCCTGGCCAAGCTCTGTGAGTGTGTCAAATGGGATGGGGTGCCGAGTGGGCTGGGGCCAAGCAGGACCCCTGACCTCACTCCCGCCCCTAGACATGTACTGCACAGAGCCCTTCCGGATCCCCTTTGCTGGCAAGGTCGAG
......................................................................(((((.((.....(((....))).....))))))).......................................................................
..................................................51.......................................................108..................................................................
SizePerfect hitTotal NormPerfect NormSRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR189782SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR038862(GSM458545)
MM472. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR189787SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM339994(GSM339994)
hues6. (cell line)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		TAX577579(Rovira)
total RNA. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR038855(GSM458538)
D10. (cell line)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR038854(GSM458537)
MM653. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577744(Rovira)
total RNA. (breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM339996(GSM339996)
hues6Neuron. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		TAX577745(Rovira)
total RNA. (breast)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR343334SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR189783SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038858(GSM458541)
MEL202. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR029126(GSM416755)
143B. (cell line)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577589(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR038853(GSM458536)
MELB. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038856(GSM458539)
D11. (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
..............................................................................GAGTGGGCTGGGGCCAAGCAGGACCC........................................................................261549.00549.0051.0038.0018.0025.0020.0018.0018.0017.0015.0010.0013.0011.005.009.00-8.0013.0011.0010.009.0010.0011.009.00-8.005.006.006.005.003.005.007.007.007.006.002.003.004.004.004.004.004.003.003.00-5.00-3.004.001.003.001.00-4.002.004.003.004.003.00-2.003.002.002.002.001.003.002.001.002.003.00-1.001.00--1.001.00--1.001.002.001.001.002.002.00--2.001.00-1.00-1.00-1.00---1.001.001.00---1.001.00-1.00---1.00---1.001.001.001.00-1.001.00-1.00---1.00---1.001.001.00--1.001.00--1.00-1.001.00----1.00---
.................................................................................TGGGCTGGGGCCAAGCAGGACCC........................................................................23149.0049.003.001.004.002.00-3.001.001.00-1.003.001.00-3.00-3.00-1.00--1.00------2.00-1.00------1.00--2.00-1.00-1.00---2.001.00------------1.00-----------1.00--1.00---1.00------1.001.00-1.00-----------------------1.00---------------------------------1.001.00----
................................................................................GTGGGCTGGGGCCAAGCAGGACCC........................................................................24116.0016.002.00-5.00-1.00-1.00--1.00-1.00-----1.00-------------------1.00----1.00----------------------------------------------------------------------------------------------1.00--------1.00-------
...............................................................................AGTGGGCTGGGGCCAAGCAGGACCC........................................................................25115.0015.001.002.002.002.00--1.001.002.00------1.00---2.00--------1.00-----------------------------------------------------------------------------------------------------------------------------
....................................................................ATGGGGTGCCGAGTGGGCTGGGGTTT..................................................................................26111.006.00------------9.00---------------------------------------1.00------------------------------------------------------------------------------------------1.00----------
.......................................................................................................CCTGACCTCACTCCCGCCCCTA...................................................2217.007.00--------------6.00---------------------------------------------------------1.00---------------------------------------------------------------------------------
....................................................................ATGGGGTGCCGAGTGGGCTGGGG.....................................................................................2316.006.00-----------------------2.00------------1.00---------1.00-------1.00---1.00-----------------------------------------------------------------------------------------------
..............................................................................GAGTGGGCTGGGGCCAAGCAGGA...........................................................................2315.005.00-----------------------------------------------------------------------1.00--2.00-----------------------------------1.00------------------------------1.00------------
..............................................................................GAGTGGGCTGGGGCCAAGCAGGACCCC.......................................................................2715.005.00-----------------------------------1.00--2.00--1.00------------------1.00---------------------------------------------------------------------------------------------
..............................................................................GAGTGGGCTGGGGCCAAGCAGGACAC........................................................................2615.003.00--1.00-1.00-----1.00-------------------1.00--------------------1.00------------------------------------------------------------------------------------------------------
........................................................................................................CTGACCTCACTCCCGCCCCTAGT.................................................2315.002.00----------------------------------------------------1.00---------------1.00------------------1.00-----------1.00-----------------------------------------------1.00------
....................................................................ATGGGGTGCCGAGTGGGCTGGGGT....................................................................................2415.006.00---------1.00------------------------------------4.00-----------------------------------------------------------------------------------------------------------
....................................................................ATGGGGTGCCGAGTGGGCTGGG......................................................................................2215.005.00-1.00---------------------1.00--------------------1.00--------------------1.00---------------1.00------------------------------------------------------------------------
..............................................................................GAGTGGGCTGGGGCCAAGCAGGACCA........................................................................2614.003.00--------------------------1.00-1.00--------1.00-----------------------------1.00--------------------------------------------------------------------------------------
...................................................................GATGGGGTGCCGAGTGGGCTGGGG.....................................................................................2414.004.00--------------2.00--------1.00----------------1.00-----------------------------------------------------------------------------------------------------------------
..............................................................................GAGTGGGCTGGGGCCAAGCAGGATCC........................................................................2614.005.00----1.00-1.00-2.00-------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................CCTGACCTCACTCCCGCCCCTAGT.................................................244.000.00--------------3.00-------------------------------------------------------------------------------------------------------------1.00-----------------------------
......................................................................................................................................TGCACAGAGCCCTTCCGGATCCCCT.................2514.004.00-------------------------------------------------4.00--------------------------------------------------------------------------------------------------------
..............................................................................GAGTGGGCTGGGGCCAAGCAGGAC..........................................................................2413.003.00----------------------1.00------------------------------------------------1.00-------------------------------------------------1.00--------------------------------
..............................................................................GAGTGGGCTGGGGCCAAGCAGGTCCC........................................................................2613.002.00----1.00----1.00-----------------------------------------1.00------------------------------------------------------------------------------------------------------
.....................................................................TGGGGTGCCGAGTGGGCTGGGG.....................................................................................2213.003.00-----------------------2.00------------------------------------------------------1.00---------------------------------------------------------------------------
.............................................................................CGAGTGGGCTGGGGCCAAGCAGGACCC........................................................................2713.003.00-------1.00-----1.00-1.00------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................GAGTGGGCTGGGGCCAAGCAGGAGCC........................................................................2613.005.00----1.00------1.00-------------------------------------------------------------------------------------------1.00--------------------------------------------------
..............................................................................GAGTGGGCTGGGGCCAAGCAGGAACC........................................................................2613.005.00--------1.00-----------------------------------1.00--------------------------------1.00----------------------------------------------------------------------------
..............................................................................GAGTGGGCTGGGGCCAAGCAGGACC.........................................................................2513.003.00-------------------1.00--------1.00-------------------------------------------------------------------------------------------------1.00---------------------------
................................................................TGGGATGGGGTGCCGAGTGGGCTGGGGCC...................................................................................2913.003.00------1.00-----------------------------------------------------1.00-1.00-------------------------------------------------------------------------------------------
....................................................................ATGGGGTGCCGAGTGGGCTGGGGTT...................................................................................2513.006.00--------------1.00----------1.00--------------------------------------------------------------------------------------1.00-----------------------------------------
.....................................................................TGGGGTGCCGAGTGGGCTGG.......................................................................................2013.003.00---------1.00--------------------------1.00-------------------------------------------------------------------------------1.00-------------------------------------
....................................................................ATGGGGTGCCGAGTGGGCTGTAAA....................................................................................2412.001.00-----------------------------------2.00----------------------------------------------------------------------------------------------------------------------
..............................................................................GAGTGGGCTGGGGCCAAGCAGG............................................................................2212.002.00----------------------1.00-1.00---------------------------------------------------------------------------------------------------------------------------------
....................................................................ATGGGGTGCCGAGTGGGCTGG.......................................................................................2112.002.00--------------------------------------------------------------------1.00-------------------1.00-----------------------------------------------------------------
..............................................................................GAGTGGGCTGGGGCCAAGCAGGACTC........................................................................2612.003.00-------1.00----------------------1.00---------------------------------------------------------------------------------------------------------------------------
..............................................................................GAGTGGGCTGGGGCCAAGCAGGAAAC........................................................................2612.005.00--------------------------------------------------1.00-----1.00-------------------------------------------------------------------------------------------------
......................................................GTGTGTCAAATGGGATGGG.......................................................................................................1912.002.00-------------------------------------------------------------------------------2.00--------------------------------------------------------------------------
....................................................................ATGGGGTGCCGAGTGGGCCGGG......................................................................................222.000.00-----------------------------------------------------------2.00----------------------------------------------------------------------------------------------
..............................................................................GAGTGGGCTGGGGCCAAGCAGGACCCA.......................................................................2712.00549.00----------------------------------1.00-------------------------------------------------1.00---------------------------------------------------------------------
....................................................................ATGGGGTGCCGAGTGGGCTGTTT.....................................................................................2312.001.00-----------------------1.00------------------------------------------------------------------------------------------------------------1.00---------------------
.............................................................................CGAGTGGGCTGGGGCCAAGCAGGACCCC.......................................................................2812.002.00---1.00----1.00-------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................CTGACCTCACTCCCGCCCCTAG..................................................2212.002.00---------------------------------------------------------------------1.00--------1.00---------------------------------------------------------------------------
.................................................................................TGGGCTGGGGCCAAGCAGGACC.........................................................................2212.002.00---------1.00---------------1.00--------------------------------------------------------------------------------------------------------------------------------
...................................................................GATGGGGTGCCGAGTGGGCTGGGA.....................................................................................242.000.00--------------2.00-------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................GAGTGGGCTGGGGCCAAGCAGGACGC........................................................................2611.003.00-----------1.00----------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................CCTGACCTCACTCCCGCCCCTAGTAA...............................................261.000.00------------------------------------1.00---------------------------------------------------------------------------------------------------------------------
..............................................................................GAGTGGGCTGGGGCCAAGCAGGCTC.........................................................................2511.002.00-------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
................................................................................GTGGGCTGGGGCCAAGCAGGACCCC.......................................................................2511.001.00-----------------------------1.00----------------------------------------------------------------------------------------------------------------------------
...............................................................................AGTGGGCTGGGGCCAAGCAGGACC.........................................................................2411.001.00----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................TTTGCTGGCAAGGTCGAG1811.001.00---------------------------------------------------------------------------------------------------------1.00------------------------------------------------
...................................................................GATGGGGTGCCGAGTGGGCTGGTCT....................................................................................2511.001.00-----------------------------------------------------------1.00----------------------------------------------------------------------------------------------
..............................................................................GAGTGGGCTGGGGCCAAGCAGGGACC........................................................................2611.002.00----------------------------------------------------------------------------------------------------------------------------------1.00-----------------------
......................................................................................................................................TGCACAGAGCCCTTCCAGAC......................201.000.00-------------------------------------------------------------------------------------------------------------------------------1.00--------------------------
........................................................................................................CTGACCTCACTCCCGCCCCTAGA.................................................2311.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------1.00--
..................................................GTGAGTGTGTCAAATGGGTTG.........................................................................................................211.000.00-----------------------------------1.00----------------------------------------------------------------------------------------------------------------------
....................................................................ATGGGGTGCCGAGTGGGCTGGGGTAT..................................................................................2611.006.00-----------------------1.00----------------------------------------------------------------------------------------------------------------------------------
.................................................................................TGGGCTGGGGCCAAGCAGGACCCC.......................................................................2411.001.00------------------------------------------1.00---------------------------------------------------------------------------------------------------------------
................................................................................................................................ATGTACTGCACAGAGCCCTTCCGGATC.....................2711.001.00------------------------------------------------------------------------------------------------------------1.00---------------------------------------------
..AGCTGTCCCTGGCCGTCAACACCTCC....................................................................................................................................................2611.001.00--------------------------------------------1.00-------------------------------------------------------------------------------------------------------------
...............................................................................AGTGGGCTGGGGCCAAGCAGGTCCC........................................................................251.000.00-------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
.....................................................................TGGGGTGCCGAGTGGGCTGGGGTTT..................................................................................2511.003.00----------------------------------------------------------------1.00-----------------------------------------------------------------------------------------
...........................................................................................CCAAGCAGGACCCCTGAC...................................................................1811.001.00----------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................GATGGGGTGCCGAGTGGGCTGG.......................................................................................2211.001.00---------1.00------------------------------------------------------------------------------------------------------------------------------------------------
................................................CTGTGAGTGTGTCAAATGGG............................................................................................................2011.001.00--------------------------------------------------------------------------------------------------------------------------------1.00-------------------------
....................................................................ATGGGGTGCCGAGTGGGCTG........................................................................................2011.001.00---------------------------------------------------------------1.00------------------------------------------------------------------------------------------
...................................................................GATGGGGTGCCGAGTGGGCTC........................................................................................211.000.00----------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
..........................................................................................................................CTAGACATGTACTGCACAGAGCCCTTCCGGATC.....................3311.001.00--------------------------------------------1.00-------------------------------------------------------------------------------------------------------------
.....................................................................TGGGGTGCCGAGTGGGCTG........................................................................................1911.001.00-----1.00----------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................ATGGGGTGCCGAGTGGGCTGGGGTAA..................................................................................2611.006.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.................................CGCCCTGGCCAAGCTCT..............................................................................................................................1721.001.00---------------------0.50----------------------------------------------------------------------------------------------------------------------------------0.50-
...................................................................GATGGGGTGCCGAGTGGGCTGGGGC....................................................................................2511.001.00----------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
......................................................................................................................................TGCACAGAGCCCTTCCGGATC.....................2111.001.00----------------------------------------------------------------------------------------------------------------------------------------1.00-----------------
....................................................................ATGGGGTGCCGAGTGGGCTGGGGCTT..................................................................................261.000.00---------------------------------------------------1.00------------------------------------------------------------------------------------------------------
.....................................................................TGGGGTGCCGAGTGGGCTGGGGTCT..................................................................................2511.003.00-----------------------------------------------------------1.00----------------------------------------------------------------------------------------------
....................................................................ATGGGGTGCCGAGTGGGCAG........................................................................................201.000.00-----------------------1.00----------------------------------------------------------------------------------------------------------------------------------
.....................................................................TGGGGTGCCGAGTGGGCTGGGT.....................................................................................221.000.00------------------------------------------------------1.00---------------------------------------------------------------------------------------------------
......................................................................................................................................TGCACAGAGCCCTTCCGGAT......................2011.001.00------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
..............................................................................GAGTGGGCTGGGGCCAAGCAGGCCCC........................................................................2611.002.00------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................TGGGGTGCCGAGTGGGCTGGGGCC...................................................................................2411.001.00-----1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.GAGCTGTCCCTGGCCGT..............................................................................................................................................................1711.001.00--------------------------------------------------------------------------------------------------------1.00-------------------------------------------------
....................................................................ATGGGGTGCCGAGTGGGCTGGA......................................................................................2211.002.00----------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
.......................................................................GGGTGCCGAGTGGGCTGGGG.....................................................................................2011.001.00-------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
..............................................................................GAGTGGGCTGGGGCCAAGCAGGACCCAA......................................................................2811.00549.00-------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
..............................................................................GAGTGGGCTGGGGCCAAGCAGGACTTA.......................................................................2711.003.00------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
................................................................................GTGGGCTGGGGCCAAGCAGGACC.........................................................................2311.001.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATGGGATGGGGTGCCGAGTGGGCTGGGGCC...................................................................................3011.001.00--------------------------------------------1.00-------------------------------------------------------------------------------------------------------------
.................................................TGTGAGTGTGTCAAATACC............................................................................................................191.000.00---------------------------------------------------------------------------------------------------------------1.00------------------------------------------
..........................................................GTCAAATGGGATGGGGTGCCGAG...............................................................................................2311.001.00-----------------------------------------------------------------------------------------------------------------------------------1.00----------------------
..............................................................................GAGTGGGCTGGGGCCAAGCAGGCCC.........................................................................2511.002.00--------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
..........................................................................................GCCAAGCAGGACCCCTGACC..................................................................2011.001.00-----1.00----------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................ATGGGGTGCCGAGTGGGCTGGAAT....................................................................................2411.002.00--------------------------------------------------------------------------------------------------1.00-------------------------------------------------------
...........................................................................................CCAAGCAGGACCCCTGACC..................................................................1911.001.00-----1.00----------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................ATGGGGTGCCGAGTGGGCTGGGAT....................................................................................2411.005.00-----------------------------------------------------------------1.00----------------------------------------------------------------------------------------
.................................................................................TGGGCTGGGGCCAAGCAGGTGAC........................................................................231.000.00-----------------------------1.00----------------------------------------------------------------------------------------------------------------------------
..............................................................................GAGTGGGCTGGGGCCAAGCAGACCC.........................................................................251.000.00-------------------------------------1.00--------------------------------------------------------------------------------------------------------------------
....................................................................ATGGGGTGCCGAGTGGGCTGGGAG....................................................................................2411.005.00-----------------------------------------------------------------------------------1.00----------------------------------------------------------------------
..............................................................................................................................ACATGTACTGCACAGAGCCCTTCCGGATC.....................2911.001.00-------------------------------------------------------------------------------------------------------------------1.00--------------------------------------
.................................................................................................................................................CTTCCGGATCCCCTTTGC.............1811.001.00--------------------------------------------------------------------------------------------------------------------------------------------1.00-------------
......................................................................GGGGTGCCGAGTGGGCTGGGGCC...................................................................................2311.001.00------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
..............................................................................GAGTGGGCTGGGGCCAAGCAGGACCT........................................................................2611.003.00--------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGTGTCAAATGGGATGGGGTGCCGAGTGGG...........................................................................................3411.001.00-------------------------------------------------------------------------------------------1.00--------------------------------------------------------------
..................................................................................GGGCTGGGGCCAAGCAGGACCC........................................................................2211.001.00---------1.00------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................TGGGGTGCCGAGTGGGCTGGGGA....................................................................................2311.003.00---------------------------------------------------------------------------1.00------------------------------------------------------------------------------
..................................................GTGAGTGTGTCAAATGGGATG.........................................................................................................2111.001.00-----------------------------------1.00----------------------------------------------------------------------------------------------------------------------
.........................................................TGTCAAATGGGATGGGGTGCCGAG...............................................................................................2411.001.00-----------------------------------------------------------------------------------------------1.00----------------------------------------------------------
...............................................................................AGTGGGCTGGGGCCAAGCAGGACCCC.......................................................................2611.001.00-----------------------------1.00----------------------------------------------------------------------------------------------------------------------------
....................................................................ATGGGGTGCCGAGTGGGCTGGGGAAA..................................................................................2611.006.00---------1.00------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................GAGTGGGCTGGGGCCAAGCAGGTCTC........................................................................2611.002.00----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................ATGGGATGGGGTGCC..................................................................................................1590.110.11------------------------------------------0.11---------------------------------------------------------------------------------------------------------------

Antisense strand
CGAGCTGTCCCTGGCCGTCAACACCTCCCTCATCGCCCTGGCCAAGCTCTGTGAGTGTGTCAAATGGGATGGGGTGCCGAGTGGGCTGGGGCCAAGCAGGACCCCTGACCTCACTCCCGCCCCTAGACATGTACTGCACAGAGCCCTTCCGGATCCCCTTTGCTGGCAAGGTCGAG
......................................................................(((((.((.....(((....))).....))))))).......................................................................
..................................................51.......................................................108..................................................................
SizePerfect hitTotal NormPerfect NormSRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR189782SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		SRR038862(GSM458545)
MM472. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR189787SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM339994(GSM339994)
hues6. (cell line)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		TAX577579(Rovira)
total RNA. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR038855(GSM458538)
D10. (cell line)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR038854(GSM458537)
MM653. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577744(Rovira)
total RNA. (breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM339996(GSM339996)
hues6Neuron. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		TAX577745(Rovira)
total RNA. (breast)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR343334SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR189783SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038858(GSM458541)
MEL202. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR029126(GSM416755)
143B. (cell line)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577589(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR038853(GSM458536)
MELB. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038856(GSM458539)
D11. (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
.............................................................AAATGGGATGGGGTGCCCAG............................................................................................... 201.000.00-------------------------------------------------------------------------------------------------1.00--------------------------------------------------------
...........................................................................GCCGAGTGGGCTGGGT..................................................................................... 161.000.00---------------------------------------------------------------------------------------------1.00------------------------------------------------------------
.............................................................................................................................................................CTTTGCTGGCAAGGTTGCC 191.000.00-----------------------1.00----------------------------------------------------------------------------------------------------------------------------------
.........................................................................CCCAGCCCACTCGGCAC...................................................................................... 1711.001.00---------------------------------------------------------------------------1.00------------------------------------------------------------------------------
.............................................................GCACCCCATCCCATTT................................................................................................... 1640.500.50---------0.25-----------------------------------------------------------------------------------------------------------------------------------------------0.25