ID: uc002nhz.3_intron_22_0_chr19_18256040_f.5p
GENE: (23)
chr19:18255990-18256239+


(2)
B-CELL
(2)
BRAIN
(1)
BREAST
(5)
CELL-LINE
(2)
CERVIX
(4)
HEART
(3)
LIVER
(1)
OTHER
(35)
SKIN
(1)
TESTES
(1)
UTERUS

Sense strand
GCGTCTACATGGGTGATAGCGACGTCTACACTGTGCACCACGTCGTCTGGGTGAGTGCCGAGTGGGAATGGCAGGGACCCGGGTTCTAGTTTGACTCTGCCCGGTCATGTCCCTTCTCAGAGCTGCATTTTGGAGCCTGGCAGGGTTAGGTAGATAGAGCTGGTGCCACCGAGTTCATCTCGGTCCCTGTCATTTGGCAGGGAGGAGGTCAGATGAGAGAGACAAGGATGGATGGATGGAAGCTCACAGA
..............................................................................................................................................(((......((((.(((((((.....)).)))))))))....)))...............................................................
..............................................................................................................................................143............................................190..........................................................
SizePerfect hitTotal NormPerfect NormSRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR040034(GSM532919)
G001N. (cervix)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
.........................................................................................................................................................................CGAGTTCATCTCGGTGG................................................................17117.0016.00-1.00---2.00---2.00--1.00------1.00---------1.00----1.001.001.00-1.00-------1.001.001.00------1.001.00-
.........................................................................................................................................................................CGAGTTCATCTCGGT..................................................................15116.0016.00-2.002.00-1.00-1.001.00----1.001.00---1.00---1.00-1.00--1.00-----1.00------------1.00-------1.00----
.........................................................................................................................................................................CGAGTTCATCTCGGTGGGA..............................................................1918.0016.00-1.00--------2.00---2.00------------1.00-------------1.00------------1.00---
.........................................................................................................................................................................CGAGTTCATCTCGGTGGA...............................................................1817.0016.00--1.00---1.001.00---1.00-----1.00------1.00---1.00-----------------------------
.........................................................................................................................................................................CGAGTTCATCTCGGTGGG...............................................................1816.0016.002.00----1.001.00---------1.00---1.00-------------------------------------
.........................................................................................................................................................................CGAGTTCATCTCGGTG.................................................................1613.0016.00-------1.00-----1.00------------------------------------1.00-------
......................................................................................................................................................................................................................................GATGGATGGAAGCTCCGGC.193.000.00---3.00------------------------------------------------------
........................................................................................................................................................................CCGAGTTCATCTCGGT..................................................................1613.003.00----1.00--------------------------1.00-----1.00--------------------
........................................................................................................................................................................CCGAGTTCATCTCGGTG.................................................................1713.003.002.00------------------------------------------1.00--------------
...................................................................................................................................................AGGTAGATAGAGCTGGTCTTG..................................................................................212.000.00------------------1.00---------------------1.00-----------------
........................................................................................................................................................................CCGAGTTCATCTCGG...................................................................1512.002.001.00---1.00-----------------------------------------------------
.....................ACGTCTACACTGTGCACCA..................................................................................................................................................................................................................1912.002.00--------2.00-------------------------------------------------
...................................................................................................................................................AGGTAGATAGAGCTGGTCTGG..................................................................................211.000.00---------------------------------------------------1.00------
...................................................................................................................................................................TGCCACCGAGTTCAT........................................................................1511.001.00----------------------------------------------------1.00-----
.................................................................................................................................................................................................TTGGCAGGGAGGAGGGC........................................171.000.00-----------1.00----------------------------------------------
........................................................................................................................................................................CCGAGTTCATCTCGGTGGA...............................................................1911.003.00-------------------------1.00--------------------------------
.........................................................................................................................................................................................................................AGAGACAAGGATGGAACT...............181.000.00--------1.00-------------------------------------------------
...................................................................................................................................................AGGTAGATAGAGCTGGTCATG..................................................................................211.000.00------------------1.00---------------------------------------
..........................................................................................................................................................................GAGTTCATCTCGGTCGA...............................................................171.000.00---------------1.00------------------------------------------
.......................GTCTACACTGTGCACT...................................................................................................................................................................................................................161.000.00---------------------------------1.00------------------------
...................................................................................................................................................AGGTAGATAGAGCTGGTTTTG..................................................................................211.000.00-------------------------------------------------1.00--------
..................................................................................................................................................................................................................................GATGGATGGATGGAAGCGGTG...211.000.00---------------------------------------1.00------------------
.........................................................................................................................................................................CGAGTTCATCTCGGTGGAA..............................................................1911.0016.00---------------1.00------------------------------------------
......................................................................................................................AGAGCTGCATTTTGGATATT................................................................................................................201.000.00------------------------------------------1.00---------------
.................................TGCACCACGTCGTCTGG........................................................................................................................................................................................................1720.500.50---------------------------------------------------------0.50
....................................................................................................................................................................................................................................TGGATGGATGGAAGCT......1660.170.17---------0.17------------------------------------------------

Antisense strand
GCGTCTACATGGGTGATAGCGACGTCTACACTGTGCACCACGTCGTCTGGGTGAGTGCCGAGTGGGAATGGCAGGGACCCGGGTTCTAGTTTGACTCTGCCCGGTCATGTCCCTTCTCAGAGCTGCATTTTGGAGCCTGGCAGGGTTAGGTAGATAGAGCTGGTGCCACCGAGTTCATCTCGGTCCCTGTCATTTGGCAGGGAGGAGGTCAGATGAGAGAGACAAGGATGGATGGATGGAAGCTCACAGA
..............................................................................................................................................(((......((((.(((((((.....)).)))))))))....)))...............................................................
..............................................................................................................................................143............................................190..........................................................
SizePerfect hitTotal NormPerfect NormSRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR040034(GSM532919)
G001N. (cervix)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
........................................................................................................................................................................................................................GAGAGACAAGGATGGAAC................ 183.000.00----------------1.00--1.00------------------------1.00-------------
...........................AGACGACGTGGTGCACAGTGT.......................................................................................................................................................................................................... 2111.001.00------------------------------1.00---------------------------
....................................................................................................................................GAGCCTGGCAGGGTTTCTA................................................................................................... 191.000.00----------------------1.00-----------------------------------
..................CAGTGTAGACGTCGC......................................................................................................................................................................................................................... 1530.330.33--------------------0.33-------------------------------------
...................................................................................................................................................................................................................CCTTGTCTCTCTCATC....................... 1680.120.12---------------------0.12------------------------------------