ID: uc002ngt.1_intron_0_0_chr19_17581517_f.5p
GENE: SLC27A1(1)
chr19:17581467-17581716+


(1)
B-CELL 		(2)
BRAIN 		(6)
BREAST 		(12)
CELL-LINE 		(1)
CERVIX 		(3)
HEART 		(8)
LIVER 		(2)
OTHER 		(8)
SKIN 		(4)
UTERUS

Sense strand
GGCTGGCGCTTCCTGCGCATCGTCTGCAAGACCGCGAGGCGAGACCTCTTGTGAGTGTTGCCGGGATCCGTCCAGGGCTGGGGGCGGGGCTGAGGGCTCTGGGGGCGCACGGTGCAGGGCTGGGTTGCGGGGACGGCTTGGAGGGTCCGGAGAGCTGAGGGTGCTTTGTAGGTTGGGGGCGGGGCTGGGCCGAGGGCTGGGCGGGGGCGGGGCCTGAGAGGGTGACCAGTTGGGGGTCTCTGAGGGGGCT
........................................................................................................................................................((((...((((((((((.........)))))))...)))...))))....................................................
.....................................................................................................................................................150...............................................200................................................
SizePerfect hitTotal NormPerfect NormSRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR189784SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR343336SRR189782SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189785TAX577739(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR343337SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040022(GSM532907)
G575N. (cervix)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR343335SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
......................................................................................................................................................................................GGCTGGGCCGAGGGCAGT..................................................1828.000.006.003.004.00-3.002.00--3.00-----------2.00-1.00--------1.00---1.00----1.00--1.00---------
......................................................................................................................................................................................GGCTGGGCCGAGGGCAGTG.................................................1920.000.002.007.003.00-1.001.00----1.00--1.00--------1.00---------------1.00-----1.001.00-------
......................................................................................................................................................................................GGCTGGGCCGAGGGCAGG..................................................186.000.003.001.00---1.00-----------------1.00-----------------------------
......................................................................................................................................................................................GGCTGGGCCGAGGGCAGGG.................................................194.000.002.00-1.00-------1.00------------------------------------------
...................................................................................................................................................................................................................GCCTGAGAGGGTGACCGG.....................1823.001.001.00--------1.00---1.00---------------------------------------
....................................................................................................................................................................................................................CCTGAGAGGGTGACCGGC....................183.000.00------2.00--------------------------------1.00-------------
...........................AAGACCGCGAGGCGAGACCTC..........................................................................................................................................................................................................2113.003.003.00----------------------------------------------------
...............................................................................................................GTGCAGGGCTGGGTTGCGGGGACGGC.................................................................................................................2612.002.00------------1.00-------------------1.00--------------------
......................................................................................................................................................................................GGCTGGGCCGAGGGCAGGT.................................................192.000.001.00---1.00------------------------------------------------
..................................................................................................................................................................................................................GGCCTGAGAGGGTGACCGG.....................192.000.00------------------1.00------------------------------1.00---
.............................................................................CTGGGGGCGGGGCTGA.............................................................................................................................................................1601.001.00---------------1.00-------------------------------------
..........................................................................................................................................................CTGAGGGTGCTTTGTCTTT.............................................................................191.000.00-----------------------------------------1.00-----------
......................TCTGCAAGACCGCGAGGCGAGAC.............................................................................................................................................................................................................2311.001.00-----------1.00-----------------------------------------
..................................................................................................................................................................................................................GGCCTGAGAGGGTGATCCC.....................191.000.00------1.00----------------------------------------------
...................................................................................................................................................................................CGGGGCTGGGCCGAGGGAG....................................................191.000.00------------------1.00----------------------------------
.................................................................................................................................................................................................GGGCTGGGCGGGGGCGCA.......................................181.000.00----------------1.00------------------------------------
.........................................................................................................................................................................................................................................GGGTCTCTGAGGGGGAG171.000.00-----------------1.00-----------------------------------
......................................................................................................................................................................................GGCTGGGCCGAGGGCAGC..................................................181.000.00----------------1.00------------------------------------
..................................................................................................................................................................................................................GGCCTGAGAGGGTGATCG......................181.000.00-----------------------------1.00-----------------------
.....................................................................................................................................................................................GGGCTGGGCCGAGGGCGAAG.................................................201.000.00-------------------1.00---------------------------------
.................................................................................................................................................................................................................GGGCCTGAGAGGGTGATCC......................1951.000.20---------------------1.00-------------------------------
......................................................................................................................................................................................GGCTGGGCCGAGGGCAGTT.................................................191.000.00-1.00---------------------------------------------------
..............................................................................................................................................................................................CGAGGGCTGGGCGGGGGGGT........................................201.000.00------------------------------------------------1.00----
......................................................................................................................................GGCTTGGAGGGTCCGTGG..................................................................................................181.000.00-------------------------------------1.00---------------
..............................................................................................................................................................................GGGGGCGGGGCTGGGCACTG........................................................201.000.00-------1.00---------------------------------------------
...............................................................................................................................................................................................GAGGGCTGGGCGGGG............................................1501.001.00---------------------------------1.00-------------------
...............................................................................................................................................................................................GAGGGCTGGGCGGGGGCTC........................................191.000.00---1.00-------------------------------------------------
..............................................................................................................................................................................GGGGGCGGGGCTGGG.............................................................1501.001.00---------------1.00-------------------------------------
.......................................................................................................GGCGCACGGTGCAGGGACG................................................................................................................................191.000.00--------------1.00--------------------------------------
.............................................................................................................CGGTGCAGGGCTGGGTCGC..........................................................................................................................191.000.00----------------------------1.00------------------------
..................................................................................................................................................................................................GGCTGGGCGGGGGCGGGGAGA...................................211.000.00--------------1.00--------------------------------------
...................................................................................................................................................................................CGGGGCTGGGCCGAGGGAGAG..................................................211.000.00--------------------------1.00--------------------------
...................................................................................................................................................................................................................GCCTGAGAGGGTGACC.......................1621.001.00------------1.00----------------------------------------
........................................................................................................................TGGGTTGCGGGGACGGC.................................................................................................................1711.001.00----------------------------------1.00------------------
..................................................................................................................................GGACGGCTTGGAGGGTCCT.....................................................................................................191.000.00-------------------1.00---------------------------------
......................................................................................................................................GGCTTGGAGGGTCCGCGC..................................................................................................181.000.00------------------------------------------1.00----------
................................................................................GGGGCGGGGCTGAGG...........................................................................................................................................................1501.001.00-----------------1.00-----------------------------------
...............................................................................................................................................................................................GAGGGCTGGGCGGGGGCTCT.......................................201.000.00---1.00-------------------------------------------------
..................................................................................................................................................................................................................GGCCTGAGAGGGTGACCGGC....................201.000.00---------------------1.00-------------------------------
...................................................................................................................................................................................................................GCCTGAGAGGGTGACCGGC....................1921.001.00-------------------------1.00---------------------------
..................................................................................................................................................................................................................GGCCTGAGAGGGTGATCC......................181.000.00----------------------------------------------1.00------
....................................................................................CGGGGCTGAGGGCTCTG.....................................................................................................................................................1720.500.50-------------------------0.50---------------------------
.....................................................................GTCCAGGGCTGGGGGCG....................................................................................................................................................................1720.500.50---------------------------------------------------0.50-
...................................................................................................................................................................................................................GCCTGAGAGGGTGACCGGCC...................2020.501.00------------------------0.50----------------------------
.................................................................................................................................................................................................................GGGCCTGAGAGGGTGA.........................1650.200.20----------------------------------------------------0.20
........................................................................................................................................................................TAGGTTGGGGGCGGG...................................................................1590.110.11--------------------------0.11--------------------------

Antisense strand
GGCTGGCGCTTCCTGCGCATCGTCTGCAAGACCGCGAGGCGAGACCTCTTGTGAGTGTTGCCGGGATCCGTCCAGGGCTGGGGGCGGGGCTGAGGGCTCTGGGGGCGCACGGTGCAGGGCTGGGTTGCGGGGACGGCTTGGAGGGTCCGGAGAGCTGAGGGTGCTTTGTAGGTTGGGGGCGGGGCTGGGCCGAGGGCTGGGCGGGGGCGGGGCCTGAGAGGGTGACCAGTTGGGGGTCTCTGAGGGGGCT
........................................................................................................................................................((((...((((((((((.........)))))))...)))...))))....................................................
.....................................................................................................................................................150...............................................200................................................
SizePerfect hitTotal NormPerfect NormSRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR189784SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR343336SRR189782SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189785TAX577739(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR343337SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040022(GSM532907)
G575N. (cervix)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR343335SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
......................................................................................................................................................................................................GGGCGGGGGCGGGGCCTGAGG............................... 212.000.00---1.00---1.00---------------------------------------------
...................................................................................................................................................................................................GCTGGGCGGGGGCGGGGGGAT.................................. 211.000.00------------------------------------1.00----------------
.......................................................................................................................................................................................................GGCGGGGGCGGGGCCTGAGG............................... 201.000.00-------1.00---------------------------------------------
......................................................GTGTTGCCGGGATCCGTCACC............................................................................................................................................................................... 211.000.00---1.00-------------------------------------------------
.......................................................................................................................................................................................................................................GGGGGTCTCTGAGGGGGG. 181.000.00------------------------------1.00----------------------
.............................................................................................................................................................................................CCGAGGGCTGGGCGGGGGTTCG....................................... 221.000.00---1.00-------------------------------------------------
.................................................................................................................................................AAGCACCCTCAGCTCTCCGGA.................................................................................... 2111.001.00---------1.00-------------------------------------------
........................................................................................................................................CTTGGAGGGTCCGGAGAGCTGAGGGGC....................................................................................... 271.000.00------------------------1.00----------------------------
...............................................................................................................................................................................................................CGGGGCCTGAGAGGGGC.......................... 171.000.00--------------------------------------------------1.00--
.................................................................................................................................................CCTACAAAGCACCCTCAGCTCTCCGGA.............................................................................. 2711.001.00---------------------------1.00-------------------------
......................................................................................................................................................................................................GGGCGGGGGCGGGGCCTGAGA............................... 211.000.00-----------------------1.00-----------------------------
.........................................................................................................................................................................................................CGGGGGCGGGGCCTGAT................................ 171.000.00---1.00-------------------------------------------------
.................CTCGCGGTCTTGCAGACGATG.................................................................................................................................................................................................................... 2111.001.00-----------1.00-----------------------------------------
...................................................................CCGTCCAGGGCTGGGTG...................................................................................................................................................................... 171.000.00-----------------------------------------------1.00-----