uc002nfp.2_intron_0_0_chr19_17337126

GTGCCTCTCCGACAGCAGATCCAGGCTCGGAGCTCCAGACGCTGGGACAGGTGACCCGGGGCGGTAGCGAGCCGGACGGCCTTGCAGGTGGGGCGGAGGTCCCGAGGAGCTCCTCGGGCGCGGTCGTCTGTGGGCTCTGCGCGCCCTGGAGGTCGAGGCTCCGGCAGCGCGGGGGTTAACTCGAGCCGGTCCCAGGCTGCGCGGCGACGTCAGAGTTCATTTACATAGCGCTTATTTGGGTTGCGCAGTCGTGGGCGGGGTCTGGACGTCGCTGCGGACCAATCGCGTGCGTCTATGCAAATAGCGGTCGTTCTGGGGAACTCTGCTCCCGCGGGGTGAGAGTTGGCCGCTCTTCGGCCGAGCTGCCCGCGCGTCCTTTCTCCGTGCGCGTCGTCAGGCGTGTCCTCTCCGCGTGTCCACCCACAGGCCGCCCGCAGACCACCCCCGCCGCGCGCGGGACACGACGCCCCCCGCAG
...............................................................................................................................................................................................................................................................................................................................................................................((((((............(((((((....)))))))......)))))).............................................................
.............................................................................................................................................................................................................................................................................................................................................................................366.........................................................426................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)

SRR207116(GSM721078)
Nuclear RNA. (cell line)

SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR037937(GSM510475)
293cand2. (cell line)

SRR207110(GSM721072)
Nuclear RNA. (cell line)

SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)

DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)

RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)

DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)

DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)

SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)

SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)

DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)

SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)

GSM532887(GSM532887)
G761N. (cervix)

SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)

SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)

SRR343333(GSM796036)
KSHV (HHV8). (cell line)

SRR189782

TAX577740(Rovira)
total RNA. (breast)

SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)

SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR029126(GSM416755)
143B. (cell line)

SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)

SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)

TAX577589(Rovira)
total RNA. (breast)

SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)

SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)

SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)

SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)

SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)

SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)

SRR040028(GSM532913)
G026N. (cervix)

SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)

SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)

SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)

SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)

SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)

SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)

SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)

SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)

SRR189784

SRR029124(GSM416753)
HeLa. (hela)

SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR037936(GSM510474)
293cand1. (cell line)

SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)

SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)

SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)

DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)

SRR037935(GSM510473)
293cand3. (cell line)

SRR040010(GSM532895)
G529N. (cervix)

SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)

SRR040029(GSM532914)
G026T. (cervix)

SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)

SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)

GSM532871(GSM532871)
G652N. (cervix)

SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)

GSM339995(GSM339995)
hues6NP. (cell line)

SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)

SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)

SRR191444(GSM715554)
109genomic small RNA (size selected RNA from . (breast)

SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)

SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)

SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)

SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)

SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)

SRR015358(GSM380323)
Na��ve B Cell (Naive39). (B cell)

SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)

SRR040008(GSM532893)
G727N. (cervix)

SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR040039(GSM532924)
G531T. (cervix)

SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)

SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)

SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)

DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)

SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)

GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR029132(GSM416761)
MB-MDA231. (cell line)

GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)

SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)

SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)

GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)

SRR038856(GSM458539)
D11. (cell line)

SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)

SRR015361(GSM380326)
Memory B cells (MM55). (B cell)

GSM532885(GSM532885)
G850N. (cervix)

SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)

TAX577743(Rovira)
total RNA. (breast)

SRR040027(GSM532912)
G220T. (cervix)

SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)

SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)

SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)

SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)

...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGCCGCGCGCGGGACCGG.............

13.00

0.00

2.00

1.00

..................................................................................................................................................................................................................................................................................................................................................................................GCGTCCTTTCTCCGTGCGCG......................................................................................

9.00

8.00

1.00

6.00

0.00

1.00

............................................................................................................................................................................................................................................................................................................................................................................................TCCGTGCGCGTCGTCAGGC.............................................................................

6.00

3.00

1.00

......................AGGCTCGGAGCTCCAGACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................

5.00

3.00

2.00

.....................................................................................................................................................................................................................................................................................................................................................GTTGGCCGCTCTTCGGCCGAGC.................................................................................................................

4.00

3.00

1.00

4.00

0.00

1.00

................................................................................................................................................................................................................................................................................................................................................................TTCGGCCGAGCTGCCCG...........................................................................................................

4.00

2.00

1.00

..........................................................................................................................................................................................................................................................................................................................................................CCGCTCTTCGGCCGAGCTGCCCGCGCGTCCTTTCTCCGTGCGCGTCGTCAGGCGTGTCCTCTCCGCGTGTCCACCCACAG..................................................

4.00

1.00

....................................................GACCCGGGGCGGTAGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................

4.00

2.00

1.00

4.00

1.00

.....................................................................................................................................................................................................................................................................................................................GTTCTGGGGAACTCTG.......................................................................................................................................................

3.00

0.20

0.40

0.20

0.40

0.20

3.00

0.00

1.00

....................................................GACCCGGGGCGGTAGTGA......................................................................................................................................................................................................................................................................................................................................................................................................................

3.00

2.00

1.00

....................................................GACCCGGGGCGGTAGT........................................................................................................................................................................................................................................................................................................................................................................................................................

3.00

2.00

3.00

1.00

2.67

0.33

3.00

0.00

2.00

1.00

2.33

1.00

1.33

1.00

2.00

0.00

2.00

0.00

1.00

.............................................................................................................................................................................................................................................................................................................................................................................................CCGTGCGCGTCGTCAGGC.............................................................................

2.00

1.00

................................................................................................................................................................................................................................................................................................................................................................TTCGGCCGAGCTGCCCGCGCG.......................................................................................................

2.00

1.00

....CTCTCCGACAGCAGATCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................

2.00

1.00

.............................................................................................................................................................................................................................................................................................................................................................................CCCGCGCGTCCTTTCTCCGTGCGCGTCGTC.................................................................................

2.00

..............................................................................................................................................................................................................................................................................................................................................................................................CGTGCGCGTCGTCAGGC.............................................................................

2.00

..............................................................................................................................................................................................................................................................................................................................................................................................CGTGCGCGTCGTCAGGCGTG..........................................................................

2.00

1.00

....................................................GACCCGGGGCGGTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................

2.00

1.00

1.33

1.00

0.33

0.67

0.33

1.00

0.67

0.33

1.00

0.33

...........................................................................................................................................................................................................................................................TGGGCGGGGTCTGGACG................................................................................................................................................................................................................

1.00

.......................................................................................................................................................................................................................................................................................................................................CCCGCGGGGTGAGAGTTG...................................................................................................................................

1.00

....................................................................................................................GGCGCGGTCGTCTGTGG.......................................................................................................................................................................................................................................................................................................................................................

1.00

...........................................................................................................................................................................................................................................................................................................................................................................................CTCCGTGCGCGTCGTCAGGC.............................................................................

1.00

.............................................................................................................................................................................................................................................................................................................................................................CTCTTCGGCCGAGCTGCCCGC..........................................................................................................

1.00

.........................CTCGGAGCTCCAGACGCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

......................AGGCTCGGAGCTCCAGACGCTGGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

....................................................................GAGCCGGACGGCCTTGCAGG....................................................................................................................................................................................................................................................................................................................................................................................................

1.00

...............................................................................................................................................................................................................................................................................................................................................................................................GTGCGCGTCGTCAGGCGTG..........................................................................

1.00

....................................................................................................................................................................................................................................................................................................................................................................................................................................CCACAGGCCGCCCGCAGA......................................

1.00

............................................................GCGGTAGCGAGCCGGACGGCCTT.........................................................................................................................................................................................................................................................................................................................................................................................................

1.00

..................ATCCAGGCTCGGAGCTCCAGACGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

............................................................................................................................................................................................................................................................................................................................................................................................TCCGTGCGCGTCGTCAGGCGT...........................................................................

1.00

0.00

1.00

0.00

1.00

....................................................................................................................................................................................................................................................................................................................................................................GCCGAGCTGCCCGCGCGTC.....................................................................................................

1.00

0.00

1.00

...........................................................................................................................................................................................................................................................................................................................................................................................................AGGCGTGTCCTCTCCGCGTGTCCA.........................................................

1.00

.....................................................................................................................................................................................................................................................................................................................................................GTTGGCCGCTCTTCGGCCGAGCTGCCCGC..........................................................................................................

1.00

0.00

1.00

............................................................................................................................................................................................................................................................................................................................................................GCTCTTCGGCCGAGCTGCCC............................................................................................................

1.00

................................................................................................................................................................................................................................................................................................................................................................TTCGGCCGAGCTGCCCGCGT........................................................................................................

1.00

0.00

1.00

0.00

1.00

..............................................................................................................................................................................................................................................................................................................................................................TCTTCGGCCGAGCTGCCCGCGCGTC.....................................................................................................

1.00

.....TCTCCGACAGCAGATCCAGGCTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

.............................................................................................................................................................................................................................................................................................................................................................................................CCGTGCGCGTCGTCAGGCG............................................................................

1.00

........................................................................................................................................................................................................................................................................................................................................................................................TTTCTCCGTGCGCGTCGTCAG...............................................................................

1.00

................................................................................................AGGTCCCGAGGAGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

0.00

1.00

........CCGACAGCAGATCCAGGCTCGGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

..............................................................................................................................................................................................................................................................................................................................................................................................CGTGCGCGTCGTCAGGCG............................................................................

1.00

...............CAGATCCAGGCTCGGAGCTCCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

...........ACAGCAGATCCAGGCTCGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

............................................................................................................................................................................................................................................................................................................................................................................................TCCGTGCGCGTCGTCA................................................................................

1.00

......................................................CCCGGGGCGGTAGCGCCG....................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

.....................CAGGCTCGGAGCTCCAGACGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

............................................................................................................................................................................................................................................................................................................................................................................................TCCGTGCGCGTCGTCAGG..............................................................................

1.00

...............................................................................................................................................................................................................................................................................................................................................................................................................................TCCACCCACAGGCCGCTGTT.........................................

1.00

0.00

1.00

...........ACAGCAGATCCAGGCTCGGAGCTCCAGACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

.............................................................................................................................................................................................................................................................................................................................................................CTCTTCGGCCGAGCTGCCCG...........................................................................................................

1.00

............................................................................................................................................................................................................................................................................................................................................................GCTCTTCGGCCGAGCTGC..............................................................................................................

1.00

.....TCTCCGACAGCAGATCCAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

.......TCCGACAGCAGATCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

.....................................................................................................................................................................................................................................................................................................................................................GTTGGCCGCTCTTCGGCCGAG..................................................................................................................

1.00

....................................................GACCCGGGGCGGTAGCGTCGA...................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

.................GATCCAGGCTCGGAGCTCCAGACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

....................................................................................................................................................................................................................................................................................................................................................................GCCGAGCTGCCCGCGCGTCCTTTC................................................................................................

1.00

..............................................................................................................................................................................................................................................................GCGGGGTCTGGACGTCGCTGCGG.......................................................................................................................................................................................................

1.00

.......................................................................................................................................................................................................................................................................................................................................................................................................CGTCAGGCGTGTCCTCTC...................................................................

1.00

..........................................................................................................................................................................................................................................................................................................................................................................................TCTCCGTGCGCGTCGTCAGG..............................................................................

1.00

....................................................GACCCGGGGCGGTAGAGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

2.00

1.00

0.00

1.00

...............CAGATCCAGGCTCGGGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

...................TCCAGGCTCGGAGCTCCAGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

....................................................GACCCGGGGCGGTAGCGACGAA..................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

.....................................GACGCTGGGACAGGTGACCCGGGGCGGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

0.00

1.00

....................................................GACCCGGGGCGGTAGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

2.00

1.00

................................................................................................................................................................................................................................................................................................................................................................TTCGGCCGAGCTGCCCGCGCGTCCTTTCTC..............................................................................................

1.00

........................................GCTGGGACAGGTGACCCG..................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

.........................................................................................................................................................................................................................................................CGTGGGCGGGGTCTGGACGTCGCTGCGG.......................................................................................................................................................................................................

1.00

0.00

1.00

................................................................................................................................................................................................................................................................................................................................................................TTCGGCCGAGCTGCCCGC..........................................................................................................

1.00

....................................................GACCCGGGGCGGTAGCGCCG....................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

.................................................................................................................................................................................................................................................................................................................................................GAGAGTTGGCCGCTCTTCGGCCGAGC.................................................................................................................

1.00

......................................................................................................................................................................................................................................................................................................................................................................................CCTTTCTCCGTGCGCGTCGTCAG...............................................................................

1.00

..........................................................................................................................................................................................................................................................................................................................................................................................TCTCCGTGCGCGTCGTCAGGC.............................................................................

1.00

..GCCTCTCCGACAGCAGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

...........................................................................................................................................................................................................................................................................................................................................................CGCTCTTCGGCCGAGCTGCCTC...........................................................................................................

1.00

0.00

1.00

....................................................GACCCGGGGCGGTAGCGACG....................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

0.67

0.33

0.67

1.00

0.33

0.67

1.00

0.33

0.67

1.00

0.33

0.56

0.11

..........................................TGGGACAGGTGACCCGG.................................................................................................................................................................................................................................................................................................................................................................................................................................

0.50

0.33

1.00

0.33

1.00

0.33

1.00

0.33

0.22