ID: uc002nfj.1_intron_34_0_chr19_17320519_f.5p
GENE: MYO9B(35)
chr19:17320469-17320718+


(13)
B-CELL
(1)
BRAIN
(2)
BREAST
(10)
CELL-LINE
(2)
CERVIX
(4)
LIVER
(3)
OTHER
(3)
SKIN

Sense strand
CTGCAGAGAGTATCGCCTTCCGCAGGCTTTCGCTCCTGCGACAAAATGCTGTGAGTACCGGTGATCGTGGGGGCGGGACCTCTTTGGTGGGGCGGAGCCTGGTGCTGGGCAGGGCCTTGGGCGTGGCTTTGTTGCTGGGAAGGCTGGTGAGTGGGGTCTTGGTGGGCGGGGCCTTGGGTGGGCAGGACCTCCCATGCCGAGGATGGGACCGGGTAGTGGGTGTGGTCTCGGGTAGCAGGGCGGGGCCTCC
..............................................................................((((......))))...(((((....((.(((((((((........))))...))))).)).))))).........................................................................................................
..............................................................................79...........................................................................156............................................................................................
SizePerfect hitTotal NormPerfect NormSRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189784SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
TAX577741(Rovira)
total RNA. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR189783DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR040008(GSM532893)
G727N. (cervix)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR189786SRR040024(GSM532909)
G613N. (cervix)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...................................................................................TTGGTGGGGCGGAGCAAG.....................................................................................................................................................1823.000.004.00-2.003.002.002.00----2.00-1.001.001.00--1.00----1.00------1.00------1.001.00---
...................................................................................TTGGTGGGGCGGAGCAAGA....................................................................................................................................................1912.000.00--1.00-1.00-2.00-2.00----1.00-1.00-----------1.001.00--1.00------1.00--
...................................................................................TTGGTGGGGCGGAGCAA......................................................................................................................................................173.000.001.00---------------1.00---1.00--------------------
....................................................................................................................................TGCTGGGAAGGCTGGTCTCG..................................................................................................201.000.00--------------------------------1.00--------
...................................................................................TTGGTGGGGCGGAGCGAG.....................................................................................................................................................181.000.00----------------------------------1.00------
................................................................................................GCCTGGTGCTGGGCAGTTTT......................................................................................................................................201.000.00---------------------------------1.00-------
...................................................................................TTGGTGGGGCGGAGCAAA.....................................................................................................................................................181.000.00-----1.00-----------------------------------
........................................................................................................................................GGGAAGGCTGGTGAGTGCT...............................................................................................191.000.00-------1.00---------------------------------
.....................................................................................GGTGGGGCGGAGCCTGGTGCTGGG.............................................................................................................................................2411.001.00---------1.00-------------------------------
..............................................................................................................................................................TTGGTGGGCGGGGCCAGC..........................................................................181.000.00---------1.00-------------------------------
..................................................................................TTTGGTGGGGCGGAGCAAG.....................................................................................................................................................191.000.00-----------1.00-----------------------------
..................................................GTGAGTACCGGTGATCGTGGGGGCGGGA............................................................................................................................................................................2811.001.00--------------------------1.00--------------
...............................................GCTGTGAGTACCGGTGATCGTGGGGGC................................................................................................................................................................................2711.001.00---------------------1.00-------------------
......................................CGACAAAATGCTGTGAGTACCGGTG...........................................................................................................................................................................................2511.001.00-------------------------1.00---------------
................................................................TCGTGGGGGCGGGACG..........................................................................................................................................................................161.000.00------------------------1.00----------------
................CTTCCGCAGGCTTTCACGA.......................................................................................................................................................................................................................191.000.00-----------------------1.00-----------------
........................................................................................................................................GGGAAGGCTGGTGAGCGCG...............................................................................................191.000.00-------1.00---------------------------------
...................................................................................TTGGTGGGGCGGAGCA.......................................................................................................................................................161.000.00-------------------1.00---------------------
.................................................................................CTTTGGTGGGGCGGAGCAA......................................................................................................................................................191.000.00-----------1.00-----------------------------
.......................................................................GGCGGGACCTCTTTGGAAGG...............................................................................................................................................................201.000.00------------------------------1.00----------
..........................................................................................................................................................................................ACCTCCCATGCCGAG.................................................1520.500.50---------------------------------------0.50-

Antisense strand
CTGCAGAGAGTATCGCCTTCCGCAGGCTTTCGCTCCTGCGACAAAATGCTGTGAGTACCGGTGATCGTGGGGGCGGGACCTCTTTGGTGGGGCGGAGCCTGGTGCTGGGCAGGGCCTTGGGCGTGGCTTTGTTGCTGGGAAGGCTGGTGAGTGGGGTCTTGGTGGGCGGGGCCTTGGGTGGGCAGGACCTCCCATGCCGAGGATGGGACCGGGTAGTGGGTGTGGTCTCGGGTAGCAGGGCGGGGCCTCC
..............................................................................((((......))))...(((((....((.(((((((((........))))...))))).)).))))).........................................................................................................
..............................................................................79...........................................................................156............................................................................................
SizePerfect hitTotal NormPerfect NormSRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189784SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
TAX577741(Rovira)
total RNA. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR189783DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR040008(GSM532893)
G727N. (cervix)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR189786SRR040024(GSM532909)
G613N. (cervix)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..................TTGTCGCAGGAGCGAAAGCCTGCGGA.............................................................................................................................................................................................................. 2613.003.00-3.00---------------------------------------
.........TCGCAGGAGCGAAAGCCTGCGGAAGGCGATAC................................................................................................................................................................................................................. 3212.002.00-2.00---------------------------------------
......................................................................................................................................CTGGGAAGGCTGGTGGAAT................................................................................................. 191.000.00------------1.00----------------------------
......................................................GTACCGGTGATCGTGGCA.................................................................................................................................................................................. 181.000.00------------------1.00----------------------
..................................................................................................................................................................................................................................CTCGGGTAGCAGGGCTTGT..... 191.000.00-----------------------------------1.00-----
................................................................................................CCTGCCCAGCACCAGGC......................................................................................................................................... 1770.140.14----------------------------------------0.14