uc002nei.1_intron_7_0_chr19_16636489

TCATTTTGCAGCAGCATGTGGTGCGGGCTGAGAGCAGGTGCCCAGCATCCTCGCAGGCGTCAGCGTAGGAGGCGCCTCAACGTGGCCAGGGCAGCGCCTCCATGGTCTGAGCCAGCGCTGTGATGCTGCCGAGCGCTGTGATGCTGCCGAGCACTAGGGCCTAGACCACGCAGGGCTCAAGCCTGTCCCTTCCCTTGCAGCCGCCAGAGCAGCCACCCTACCCGCACCACCAGGGCGGCCCACCCCACTG
..................................................................................................(((.(((((((.(((...((......)).((((.((((......)).)))).)).....))).)))))))....)))...........................................................................
.................................................................................................98...............................................................................179.....................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR037937(GSM510475)
293cand2. (cell line)

SRR037944(GSM510482)
293DcrTN_cand5. (cell line)

SRR060168(GSM565978)
5-8F_nucleus. (cell line)

DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)

DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)

SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)

SRR207111(GSM721073)
Whole cell RNA. (cell line)

SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)

SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)

SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)

SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)

SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)

SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)

SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)

TAX577743(Rovira)
total RNA. (breast)

SRR037936(GSM510474)
293cand1. (cell line)

SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)

DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)

SRR189785

SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)

SRR037931(GSM510469)
293GFP. (cell line)

SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)

SRR038859(GSM458542)
MM386. (cell line)

DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)

SRR033728(GSM497073)
MALT (MALT413). (B cell)

SRR033731(GSM497076)
h929 Cell line (h929). (B cell)

SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)

SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)

SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)

SRR029124(GSM416753)
HeLa. (hela)

SRR191555(GSM715665)
195genomic small RNA (size selected RNA from . (breast)

SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)

SRR037935(GSM510473)
293cand3. (cell line)

SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)

SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)

TAX577746(Rovira)
total RNA. (breast)

SRR191508(GSM715618)
152genomic small RNA (size selected RNA from . (breast)

SRR029129(GSM416758)
SW480. (cell line)

DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR037943(GSM510481)
293DcrTN. (cell line)

SRR033724(GSM497069)
L428 cell line (L428). (B cell)

SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)

DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)

SRR343333(GSM796036)
KSHV (HHV8). (cell line)

GSM416733(GSM416733)
HEK293. (cell line)

SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)

SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)

SRR038861(GSM458544)
MM466. (cell line)

SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)

SRR038860(GSM458543)
MM426. (cell line)

SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)

SRR037934(GSM510472)
293cand4_rep3. (cell line)

SRR037939(GSM510477)
293cand5_rep1. (cell line)

SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)

TAX577738(Rovira)
total RNA. (breast)

SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)

SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)

SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)

SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

SRR037933(GSM510471)
293cand4_rep2. (cell line)

SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)

SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)

SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)

SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)

SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)

......................................................................................................TGGTCTGAGCCAGCGCTGTGATGCT...........................................................................................................................

97.00

12.00

4.00

12.00

3.00

6.00

3.00

2.00

3.00

1.00

2.00

1.00

2.00

1.00

2.00

1.00

..........................................................................................................................................TGATGCTGCCGAGCACTAGGGCCTAGAC....................................................................................

8.00

.....................................................................................................ATGGTCTGAGCCAGCGCTGTGATGCT...........................................................................................................................

8.00

1.00

2.00

1.00

......................................................................................................TGGTCTGAGCCAGCGCTGTGAT..............................................................................................................................

7.00

5.00

2.00

......................................................................................................TGGTCTGAGCCAGCGCTGTGATGC............................................................................................................................

5.00

1.00

2.00

1.00

......................................................................................................TGGTCTGAGCCAGCGCTGTGATGCTG..........................................................................................................................

5.00

3.00

1.00

.......................................................................................................GGTCTGAGCCAGCGCTGTGATGC............................................................................................................................

4.00

1.00

3.00

.........................................................................................................TCTGAGCCAGCGCTGTGATGCT...........................................................................................................................

3.00

1.00

......................................................................................................TGGTCTGAGCCAGCGCTGTGATG.............................................................................................................................

3.00

1.00

......................................................................................................................TGTGATGCTGCCGAGAG...................................................................................................................

2.00

0.00

2.00

.............................................................................................................................................TGCTGCCGAGCACTAGGGCCTAGACCACGCAGGGCTCAAGCCTGTCCCTTCCCTTGCA...................................................

2.00

.......................................................................................................GGTCTGAGCCAGCGCTGTGATGCT...........................................................................................................................

2.00

1.00

.......................................................................................................................................................CACTAGGGCCTAGACCACGCAGGG...........................................................................

1.00

..............................AGAGCAGGTGCCCAGCATCC........................................................................................................................................................................................................

1.00

.....................................................................................................ATGGTCTGAGCCAGCGCTGTGAT..............................................................................................................................

1.00

................TGTGGTGCGGGCTGAGAGCTCTG...................................................................................................................................................................................................................

1.00

0.00

1.00

.....................................................................................................................................................................CCACGCAGGGCTCAAGC....................................................................

1.00

...................................................................................................................................................CGAGCACTAGGGCCTAGAC....................................................................................

1.00

.....................................................................................................ATGGTCTGAGCCAGCGCTG..................................................................................................................................

1.00

........................................................................................................GTCTGAGCCAGCGCTGTGATGCT...........................................................................................................................

1.00

....................................................................................................................................................................................................................................ACCAGGGCGGCCCACCA.....

1.00

0.00

1.00

.....................................................................................................ATGGTCTGAGCCAGCGCTGTGA...............................................................................................................................

1.00

....................................................................................................CATGGTCTGAGCCAGCGCTGTGATGCT...........................................................................................................................

1.00

...............................................................................................................................................................................................................................GCACCACCAGGGCGGCGGCG.......

1.00

0.00

1.00

.........................................................................................................TCTGAGCCAGCGCTGTGATGCTG..........................................................................................................................

1.00

..............................................................................................................................................................................................................................CGCACCACCAGGGCGGCC..........

1.00

......................................................................................................TGGTCTGAGCCAGCGCTG..................................................................................................................................

1.00

......................................................................................................TGGTCTGAGCCAGCGCTGTGATTCTG..........................................................................................................................

1.00

7.00

1.00

...TTTTGCAGCAGCATGTGTTG...................................................................................................................................................................................................................................

1.00

0.00

1.00

.........AGCAGCATGTGGTGCGGGCCGAG..........................................................................................................................................................................................................................

1.00

0.00

1.00

......................GCGGGCTGAGAGCAGTCGA.................................................................................................................................................................................................................

1.00

0.00

1.00

..............................................................................................................................TGCCGAGCGCTGTGATG...........................................................................................................

1.00

..............................AGAGCAGGTGCCCAGCATCCTCGCAGGCGCC.............................................................................................................................................................................................

1.00

0.00

1.00

...................................................................................................CCATGGTCTGAGCCAGCGCTGTGATGCT...........................................................................................................................

1.00

...........................................................................................................................................................................................................................ACCCGCACCACCAGGGCGGCCCACCCCA...

1.00

...............................................................................................................................................................................................................................GCACCACCAGGGCGGGG..........

1.00

0.00

1.00

......................................................................................................TGGTCTGAGCCAGCGCTGTGATGCG...........................................................................................................................

1.00

5.00

1.00

.......................................................................................................................................................................................TGTCCCTTCCCTTGCA...................................................

0.14