ID: uc002ndi.2_intron_2_0_chr19_16192857_f.5p
GENE: TPM4(3)
chr19:16192807-16193056+


(1)
AGO1.ip 		(1)
AGO2.ip 		(7)
B-CELL 		(4)
BRAIN 		(18)
BREAST 		(17)
CELL-LINE 		(8)
CERVIX 		(2)
FIBROBLAST 		(4)
HEART 		(4)
HELA 		(8)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(14)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
GCCCTGCAGAAGCTGGAGGAGGCAGAAAAAGCTGCAGATGAGAGTGAGAGGTAAGGACGCTTTGAATCTGGTGGCATCCGTGTTTGCTTTTAGAAAATGGGGATCATGCTGCCGACCTCGCAGAGCTGGTGTGAAAGTAAACAAGGTCACAAGGACATGCATGTGTCCACAAAAAAGTGCATGACAGCACTTTGTAAACCATCACTCCATGGGTAGAGATGTTTATCCGTGGCCAGGCACGGTGGCTCAT
......................................................((((((........(((..((((((.(((((.........))))).)))...)))..))).....(((...((..(((((............))))).))...)))..)))))).....(((((((......))))))).........................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		TAX577746(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		TAX577580(Rovira)
total RNA. (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		TAX577739(Rovira)
total RNA. (breast)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		TAX577741(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		TAX577742(Rovira)
total RNA. (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189784SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR189787SRR040028(GSM532913)
G026N. (cervix)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532877(GSM532877)
G691N. (cervix)		SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM532874(GSM532874)
G699T. (cervix)		SRR038855(GSM458538)
D10. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR040007(GSM532892)
G601T. (cervix)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335TAX577579(Rovira)
total RNA. (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR189786GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR040018(GSM532903)
G701N. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040039(GSM532924)
G531T. (cervix)		SRR038854(GSM458537)
MM653. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		SRR029125(GSM416754)
U2OS. (cell line)		SRR189782SRR040008(GSM532893)
G727N. (cervix)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040027(GSM532912)
G220T. (cervix)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
..................................................GTAAGGACGCTTTGAATCTGG...................................................................................................................................................................................21134.0034.00--11.008.003.00-4.00-----3.003.00-1.00-1.00-----------------------------------------------------------------------------
...............................................................................................................................................................................AGTGCATGACAGCACTTGG........................................................1924.000.0017.00----1.00----------------1.00--1.00-------1.00--1.00----1.001.00----------------------------------------------------
..................................................GTAAGGACGCTTTGAATC......................................................................................................................................................................................18119.0019.00-14.00-----------------1.00-----------1.00-------------------------1.00-1.00------1.00----------------------------
..................................................GTAAGGACGCTTTGAATCTGGTGGCAT.............................................................................................................................................................................27115.0015.00--1.001.005.00--1.001.00------2.00-1.00-------1.00-------------1.00-----------------------------------1.00-------------------
...............................................................................................................................................................................AGTGCATGACAGCACTTGGGT......................................................2113.000.006.00----1.00--1.002.00-1.00------------------------------------1.001.00---------------------------------------------
..................................................GTAAGGACGCTTTGAATCTGGTGGCA..............................................................................................................................................................................26112.0012.00-----2.00-2.00-----1.00------2.00-----2.001.00----1.00------------1.00-------------------------------------------------
...............................................................................................................................................................................AGTGCATGACAGCACTTGGT.......................................................2010.000.005.00-----1.00-----1.00------------------------------1.00---------1.00------1.00----------------------------------
...............................................................................................................................................................................AGTGCATGACAGCACTTGGG.......................................................209.000.003.00----1.00--1.002.00-1.00--------------------------------------------1.00--------------------------------------
..................................................GTAAGGACGCTTTGAATCTGGTGGCATC............................................................................................................................................................................2817.007.00---1.00---2.00------2.001.00-----------------------------------------------------1.00-------------------------
..................................................GTAAGGACGCTTTGAATCTGGTGGCATCCGT.........................................................................................................................................................................3116.006.00------1.00-1.00-2.00---1.00--------------------------------------------------------1.00-----------------------
..................................................GTAAGGACGCTTTGAATCTGGTGGC...............................................................................................................................................................................2516.006.00---1.00-1.00-1.00----------1.001.00--------1.00------------------------------------------------------------------
..................................................GTAAGGACGCTTTGAATCTGGTGGCATCCGTG........................................................................................................................................................................3214.004.00---1.00----1.00-2.00------------------------------------------------------------------------------------
..................................................GTAAGGACGCTTTGAATCTGGTGG................................................................................................................................................................................2414.004.00-------1.00------------------------------------1.00-------1.00--------------1.00---------------------------
..................................................GTAAGGACGCTTTGAATCTGGTGGCATCCGTGTTT.....................................................................................................................................................................3513.003.00----1.00---1.00---1.00----------------------------------------------------------------------------------
...............................................................................................................................................................................AGTGCATGACAGCACTTG.........................................................183.000.00-----2.00-----1.00-----------------------------------------------------------------------------------
..................................................GTAAGGACGCTTTGA.........................................................................................................................................................................................1523.003.00-------------------0.50--0.50---------------------------------------------1.00-------------0.500.50-----------
...............................................................................................................................................................................AGTGCATGACAGCACTTGGA.......................................................203.000.002.00----------1.00-----------------------------------------------------------------------------------
...............................................................................................................................................................................AGTGCATGACAGCACTTGGGA......................................................213.000.00------1.00--2.00-------------------------------------------------------------------------------------
..................................................GTAAGGACGCTTTGAATCTGGTGGCATCCGTGT.......................................................................................................................................................................3312.002.00--------1.00-1.00------------------------------------------------------------------------------------
............................................................................................................................................................................................................CTCCATGGGTAGAGATGTT...........................1912.002.00--------------------------------------1.00---------------------------------1.00----------------------
..................................................GTAAGGACGCTTTGAATCTGGTG.................................................................................................................................................................................2312.002.00----------------1.00-----------1.00------------------------------------------------------------------
..................................................GTAAGGACGCTTTGAATA......................................................................................................................................................................................182.000.00----------------2.00------------------------------------------------------------------------------
...............................................................................................................................................................................AGTGCATGACAGCACTTGGTA......................................................212.000.002.00----------------------------------------------------------------------------------------------
...............................................................................................................................................................................AGTGCATGACAGCACTTGGGG......................................................212.000.00---------1.00-------1.00-----------------------------------------------------------------------------
...............................................................................................................................................................................AGTGCATGACAGCACTTGCGT......................................................211.000.001.00----------------------------------------------------------------------------------------------
...................................................TAAGGACGCTTTGAATGC.....................................................................................................................................................................................181.000.00--------------------------------------------------1.00--------------------------------------------
..................................................GTAAGGACGCTTTGAATCTGGTGGCATCCGTGTTTG....................................................................................................................................................................3611.001.00-------------1.00---------------------------------------------------------------------------------
..................................................GTAAGGACGCTTTGAATCTGGTGGCATCCGTGTTTA....................................................................................................................................................................3611.003.00---------------------------1.00-------------------------------------------------------------------
..............GGAGGAGGCAGAAAAAGCTGC.......................................................................................................................................................................................................................2121.001.00---------------------------------------------------1.00-------------------------------------------
...............................................................................................................................................................................AGTGCATGACAGCACCTGG........................................................191.000.001.00----------------------------------------------------------------------------------------------
.....................................................AGGACGCTTTGAATCTGG...................................................................................................................................................................................1811.001.00---------------------------------------------------------------1.00-------------------------------
.............TGGAGGAGGCAGAAAGAT...........................................................................................................................................................................................................................181.000.00--------------1.00--------------------------------------------------------------------------------
...............................................................GAATCTGGTGGCATCCGTGTT......................................................................................................................................................................2111.001.00----------------------------------1.00------------------------------------------------------------
................................................................................................................CGACCTCGCAGAGCTGGTGTG.....................................................................................................................2111.001.00------------------1.00----------------------------------------------------------------------------
........................................................ACGCTTTGAATCTGGTGGC...............................................................................................................................................................................1911.001.00----------------------------------------------------------1.00------------------------------------
.....................................................AGGACGCTTTGAATCTG....................................................................................................................................................................................1711.001.00-----------------------------------1.00-----------------------------------------------------------
...............................................................................................................................................................................AGTGCATGACAGCACTTGAG.......................................................201.000.001.00----------------------------------------------------------------------------------------------
......................................................................................................................................................AAGGACATGCATGTGTCCTC................................................................................201.000.00------------------------------------------------------1.00----------------------------------------
..........AGCTGGAGGAGGCAGACAAA............................................................................................................................................................................................................................201.000.00------------------------1.00----------------------------------------------------------------------
........................................................ACGCTTTGAATCTGGTGGCAT.............................................................................................................................................................................2111.001.00----------------------------------------------1.00------------------------------------------------
.............................................................................................................................................................................AAAGTGCATGACAGCACTTGG........................................................211.000.00-----------------------------------------------------------------1.00-----------------------------
...................................................TAAGGACGCTTTGAATCTGG...................................................................................................................................................................................2011.001.00------1.00----------------------------------------------------------------------------------------
...............................................................................................................................................................................AGTGCATGACAGCACTTTGGA......................................................211.000.00-----------1.00-----------------------------------------------------------------------------------
....TGCAGAAGCTGGAGGACAAT..................................................................................................................................................................................................................................201.000.00-----------------------------------------------1.00-----------------------------------------------
........................................................................................................................................................................................................................................CCAGGCACGGTGGCTCATCG201.000.00----------------------------------------------------------------------1.00------------------------
........................................................................................................................CAGAGCTGGTGTGAAAGTA...............................................................................................................1911.001.00-------1.00---------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................TGGCCAGGCACGGTGGCTCATTCCC251.000.00-------------------------------------------------------1.00---------------------------------------
...................................................................................................................................TGAAAGTAAACAAGGATAA....................................................................................................191.000.00----------1.00------------------------------------------------------------------------------------
.........AAGCTGGAGGAGGCAGAAAAAGCTGCAGACGAG................................................................................................................................................................................................................331.000.00--------------------------------------------------------------------------1.00--------------------
...............................................................................................................................................................................AGTGCATGACAGCACTTGT........................................................191.000.001.00----------------------------------------------------------------------------------------------
..................................................GTAAGGACGCTTTGAATCTGGCGA................................................................................................................................................................................2411.0034.00----1.00------------------------------------------------------------------------------------------
................................................AGGTAAGGACGCTTTGAATC......................................................................................................................................................................................2011.001.00-------------------------------------1.00---------------------------------------------------------
.......................................................................TGGCATCCGTGTTTGCAT.................................................................................................................................................................181.000.00-------------------------------------------------------------1.00---------------------------------
......CAGAAGCTGGAGGAGGCAGAAAAAGC..........................................................................................................................................................................................................................2621.001.00------------------------------1.00----------------------------------------------------------------
.....GCAGAAGCTGGAGGAGTA...................................................................................................................................................................................................................................181.000.00-----------------------------1.00-----------------------------------------------------------------
..................................................GTAAGGACGCTTTGAATCTGT...................................................................................................................................................................................211.000.00--------------------------------------------------------------1.00--------------------------------
......................CAGAAAAAGCTGCAGATGAGAGTGAGAG........................................................................................................................................................................................................2820.500.50----0.50------------------------------------------------------------------------------------------
.............................AGCTGCAGATGAGAGTGAG..........................................................................................................................................................................................................1920.500.50------------------------0.50----------------------------------------------------------------------
...........................AAAGCTGCAGATGAGAGTG............................................................................................................................................................................................................1920.500.50--------------------------------------------------------------------------------------0.50--------
......................CAGAAAAAGCTGCAGATGAGAGTG............................................................................................................................................................................................................2420.500.50-------------------------------------------------------------------------------------0.50---------
............................................................TTTGAATCTGGTGGCAT.............................................................................................................................................................................1720.500.50---------------------------------------------------------------------------------0.50-------------
................................TGCAGATGAGAGTGAGAG........................................................................................................................................................................................................1820.500.50----------------------------------------------------------------------------0.50------------------
............................AAGCTGCAGATGAGAGTG............................................................................................................................................................................................................1820.500.50------------------0.50----------------------------------------------------------------------------
.............................AGCTGCAGATGAGAGTGAGA.........................................................................................................................................................................................................2020.500.50----------------------------------------------------------------------------------------0.50------
...CTGCAGAAGCTGGAGGAGGCAGAA...............................................................................................................................................................................................................................2420.500.50--------------------------------------------------------------------------------0.50--------------
......................CAGAAAAAGCTGCAGATGA.................................................................................................................................................................................................................1920.500.50-----------------------------0.50-----------------------------------------------------------------
..............GGAGGAGGCAGAAAAAGCTGCAGAT...................................................................................................................................................................................................................2520.500.50------------------------------------------------------------------------------------0.50----------
...............................CTGCAGATGAGAGTGAGAG........................................................................................................................................................................................................1920.500.50------------------------0.50----------------------------------------------------------------------
.............................AGCTGCAGATGAGAGTGA...........................................................................................................................................................................................................1820.500.50------------------------------------------------------------------------------0.50----------------
.....GCAGAAGCTGGAGGAGGCAGAAAAAGC..........................................................................................................................................................................................................................2720.500.50-------------------------------------------------------------------------------0.50---------------
....TGCAGAAGCTGGAGGAGGCAGAAA..............................................................................................................................................................................................................................2420.500.50---------------------------------------------------------------------------------------0.50-------
............CTGGAGGAGGCAGAAAAAG...........................................................................................................................................................................................................................1940.500.50------------------------------------------------------------------------------------------0.25-0.25--
..............GGAGGAGGCAGAAAAAGC..........................................................................................................................................................................................................................1850.400.40---------------------------------------------------------------------------------------------0.200.20
....TGCAGAAGCTGGAGGAGG....................................................................................................................................................................................................................................1830.330.33------------------------------0.33----------------------------------------------------------------
...CTGCAGAAGCTGGAGGAGG....................................................................................................................................................................................................................................1930.330.33----------------------------------------------------------------------------0.33------------------
.....GCAGAAGCTGGAGGAGGCAGAA...............................................................................................................................................................................................................................2230.330.33--------------------------------0.33--------------------------------------------------------------
.............TGGAGGAGGCAGAAAAAGC..........................................................................................................................................................................................................................1930.330.33-------------------------------0.33---------------------------------------------------------------
.........................AAAAAGCTGCAGATGAG................................................................................................................................................................................................................1740.250.25-------------------------------------------------------------------------------------------0.25---
.CCCTGCAGAAGCTGGAGG.......................................................................................................................................................................................................................................1840.250.25---------------------------------0.25-------------------------------------------------------------
.......AGAAGCTGGAGGAGGCAGA................................................................................................................................................................................................................................1950.200.20----------------------------------0.20------------------------------------------------------------
........GAAGCTGGAGGAGGCAGA................................................................................................................................................................................................................................1850.200.20--------------------0.20--------------------------------------------------------------------------

Antisense strand
GCCCTGCAGAAGCTGGAGGAGGCAGAAAAAGCTGCAGATGAGAGTGAGAGGTAAGGACGCTTTGAATCTGGTGGCATCCGTGTTTGCTTTTAGAAAATGGGGATCATGCTGCCGACCTCGCAGAGCTGGTGTGAAAGTAAACAAGGTCACAAGGACATGCATGTGTCCACAAAAAAGTGCATGACAGCACTTTGTAAACCATCACTCCATGGGTAGAGATGTTTATCCGTGGCCAGGCACGGTGGCTCAT
......................................................((((((........(((..((((((.(((((.........))))).)))...)))..))).....(((...((..(((((............))))).))...)))..)))))).....(((((((......))))))).........................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		TAX577746(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		TAX577580(Rovira)
total RNA. (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		TAX577739(Rovira)
total RNA. (breast)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		TAX577741(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		TAX577742(Rovira)
total RNA. (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189784SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR189787SRR040028(GSM532913)
G026N. (cervix)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532877(GSM532877)
G691N. (cervix)		SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM532874(GSM532874)
G699T. (cervix)		SRR038855(GSM458538)
D10. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR040007(GSM532892)
G601T. (cervix)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335TAX577579(Rovira)
total RNA. (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR189786GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR040018(GSM532903)
G701N. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040039(GSM532924)
G531T. (cervix)		SRR038854(GSM458537)
MM653. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		SRR029125(GSM416754)
U2OS. (cell line)		SRR189782SRR040008(GSM532893)
G727N. (cervix)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040027(GSM532912)
G220T. (cervix)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
.................................................................................................................................................................................TGCATGACAGCACTTTGGGTA.................................................... 212.000.00-----------------------1.00----------------------------------------1.00------------------------------
...................................................................................................................................................................TGTCCACAAAAAAGTATTG.................................................................... 191.000.00---------------------1.00-------------------------------------------------------------------------
.................................................................................................................................................GTCACAAGGACATGCAA........................................................................................ 171.000.00-------------------------------------------------------------------------1.00---------------------
...............................................................................................................................GGTGTGAAAGTAAACATCG........................................................................................................ 191.000.00---------------------1.00-------------------------------------------------------------------------
.................................................................................................................................................................................TGCATGACAGCACTTTGGGGA.................................................... 211.000.00-----------------------1.00-----------------------------------------------------------------------
............................................................................................................................................................................................ACTTTGTAAACCATCAAATT.......................................... 201.000.00----------------------------------------1.00------------------------------------------------------
................................................AAAGCGTCCTTACCT........................................................................................................................................................................................... 1520.500.50----------------------0.50------------------------------------------------------------------------