ID: uc002ncc.2_intron_3_0_chr19_16146828_f.5p
GENE: (4)
chr19:16146778-16147027+


(2)
BREAST
(1)
CELL-LINE
(1)
HELA
(1)
LIVER
(2)
SKIN
(1)
TESTES
(1)
UTERUS

Sense strand
GTGACCGAGCTCCTGCCCACGTGGGGACCCAGGGAGCCGTCGAGCTCCAGGTATGCACCTCTGCCCAGTGCACCTGGATCGTTCACCGTCATGGAGCTGCCATCCCACTTGTCGTCCCAGTCATCATCACTGCCCTAGCTGGCCTAGTTGCCACCAAGGAGCTGCTGAGGCCACGGCTTCAGGGCATCCCTACCGCCTGGAAATCCTGCGCTGGCTGCTGGAAGGCACTCTGTGGTGGCACCAGCTGCGG
.................................................................(((((...((((..((.........((((.....)))).........))..)))).......))))).(((...((((......))))...)))...........................................................................................
...............................................................64...................................................................................................165...................................................................................
SizePerfect hitTotal NormPerfect NormSRR553576(SRX182782)
source: Testis. (testes)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
TAX577743(Rovira)
total RNA. (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
.....................................................................................................................................................................................................TGGAAATCCTGCGCTGGCTGCTGGAAGGC........................2919.009.009.00--------
..........................................................................................................................................................................................................................TGGAAGGCACTCTGTGGTGGCACCAGCTGC..3018.008.008.00--------
................................................................................................................................................TAGTTGCCACCAAGGAGCTGCTGAGGC...............................................................................2715.005.005.00--------
................................................................................................................................................TAGTTGCCACCAAGGAGCTGCTGAGGCCACGGC.........................................................................3314.004.004.00--------
................................................................................................................................................TAGTTGCCACCAAGGAGCTGCTGAGGCCAC............................................................................3013.003.003.00--------
.............................................................TGCCCAGTGCACCTGGATCGTTCACCGTC................................................................................................................................................................2913.003.003.00--------
...........................................................TCTGCCCAGTGCACCT...............................................................................................................................................................................1623.003.003.00--------
................................................................................................................................................TAGTTGCCACCAAGGAGCTGCTGAGG................................................................................2613.003.003.00--------
...........................................................TCTGCCCAGTGCACCTGGATCGTTCACCGTC................................................................................................................................................................3112.002.002.00--------
.....................................................................................................................................................................................................TGGAAATCCTGCGCTGGCTGCTGGA............................2512.002.002.00--------
...................................................................................................................................................................................................................TGGCTGCTGGAAGGCACTCTGTGGT..............2512.002.002.00--------
......................................................................CACCTGGATCGTTCACCGTCATGGAGCTGC......................................................................................................................................................3012.002.002.00--------
....................................................................TGCACCTGGATCGTTCACCGTCATGGAGC.........................................................................................................................................................2912.002.002.00--------
.....................................................................................................................................................................................................................GCTGCTGGAAGGCACTCTGTGGTGGC...........2611.001.001.00--------
...............................................................................................................TCGTCCCAGTCATCATCACTGCCCTAGCT..............................................................................................................2911.001.001.00--------
.....................................................TGCACCTCTGCCCAGTGCACCTGGATCGTT.......................................................................................................................................................................3011.001.001.00--------
...................................................................................................................................................................................................................TGGCTGCTGGAAGGCACTCTGTGGTGGCACC........3111.001.001.00--------
..................ACGTGGGGACCCAGGGCCGG....................................................................................................................................................................................................................201.000.00---1.00-----
.......................................................................................................................................TAGCTGGCCTAGTTGCCACCAAGGAGC........................................................................................2711.001.001.00--------
.......................................................................................................................................TAGCTGGCCTAGTTGCCACCAAGGAGCTGT.....................................................................................301.000.001.00--------
.............................................................................................................................................................................................................................AAGGCACTCTGTGGTGGCACCAGCTGC..2711.001.001.00--------
...........................................................................................TGGAGCTGCCATCCCACTTGTCGTCCCAGT.................................................................................................................................3011.001.001.00--------
..................................................................................................................TCCCAGTCATCATCACTGCCCTAGCTGGCC..........................................................................................................3011.001.001.00--------
.......................................................................ACCTGGATCGTTCACCGTCATGGAGCTG.......................................................................................................................................................2811.001.001.00--------
................................................................................................................................................TAGTTGCCACCAAGGAG.........................................................................................1711.001.001.00--------
....................................................................TGCACCTGGATCGTTCACCGT.................................................................................................................................................................2111.001.001.00--------
...............................................................................................................TCGTCCCAGTCATCATCACTGCCCTAGC...............................................................................................................2811.001.001.00--------
.....................................................................................................................................................................................................TGGAAATCCTGCGCTGGCTGCTGGAA...........................2611.001.001.00--------
.............................................................................................................................................................................................................................AAGGCACTCTGTGGTGGCACCAGC.....2411.001.001.00--------
.....................................................................................................................................................................................................TGGAAATCCTGCGCTGGCTGCTGGAAGG.........................2811.001.001.00--------
.........................................................CCTCTGCCCAGTGCACCTGGATCGTTCACC...................................................................................................................................................................3011.001.001.00--------
................................................................................................................................................TAGTTGCCACCAAGGAGCTGCTGAGGCCATA...........................................................................311.000.001.00--------
.......................................................................ACCTGGATCGTTCACCGTCATGGAGCTGC......................................................................................................................................................2911.001.001.00--------
.................................................................................................................................................................................................................GCTGGCTGCTGGAAGGCACTCTGTG................2511.001.001.00--------
...........................................................................................TGGAGCTGCCATCCCACTTGTCG........................................................................................................................................2311.001.00----1.00----
..........................................................................TGGATCGTTCACCGTCATGGAGCTGC......................................................................................................................................................2611.001.001.00--------
............................................................................................................TTGTCGTCCCAGTCATCATCACTGCCCTAGT...............................................................................................................311.000.001.00--------
......................................................................CACCTGGATCGTTCACCGTCATGGAGCTGT......................................................................................................................................................301.000.001.00--------
......................................................................CACCTGGATCGTTCACCGTCATGGAGC.........................................................................................................................................................2711.001.001.00--------
...............................................................................................................TCGTCCCAGTCATCATCACTGCCCTAGCTGTT...........................................................................................................321.000.001.00--------
.................................................................CAGTGCACCTGGATCGTTCACCGTCATGGT...........................................................................................................................................................301.000.001.00--------
.................................................................................TTCACCGTCATGGAGCTGCCATCCCACT.............................................................................................................................................2811.001.001.00--------
.....................................................TGCACCTCTGCCCAGTGCACCTGGATCGTTC......................................................................................................................................................................3111.001.001.00--------
................................................................CCAGTGCACCTGGATCGTTCACCGTCATGTTT..........................................................................................................................................................321.000.001.00--------
..........................................................................................................................................................................................................................TGGAAGGCACTCTGTGGT..............1820.500.500.50--------
...................................................................................................................................................................................................................TGGCTGCTGGAAGGCA.......................1680.250.250.25--------
.........................................................................................CATGGAGCTGCCATCC.................................................................................................................................................1640.250.250.25--------

Antisense strand
GTGACCGAGCTCCTGCCCACGTGGGGACCCAGGGAGCCGTCGAGCTCCAGGTATGCACCTCTGCCCAGTGCACCTGGATCGTTCACCGTCATGGAGCTGCCATCCCACTTGTCGTCCCAGTCATCATCACTGCCCTAGCTGGCCTAGTTGCCACCAAGGAGCTGCTGAGGCCACGGCTTCAGGGCATCCCTACCGCCTGGAAATCCTGCGCTGGCTGCTGGAAGGCACTCTGTGGTGGCACCAGCTGCGG
.................................................................(((((...((((..((.........((((.....)))).........))..)))).......))))).(((...((((......))))...)))...........................................................................................
...............................................................64...................................................................................................165...................................................................................
SizePerfect hitTotal NormPerfect NormSRR553576(SRX182782)
source: Testis. (testes)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
TAX577743(Rovira)
total RNA. (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
..............................................................................................................ATGATGACTGGGACGAC........................................................................................................................... 1721.001.00------0.50-0.50
.......................................................................................................................................................CACCAAGGAGCTGCTGCTT................................................................................ 191.000.00-----1.00---
....................................................................................................................CCAGTCATCATCACTCAAC................................................................................................................... 191.000.00--1.00------
...............................................................................................................TCGTCCCAGTCATCATTA......................................................................................................................... 181.000.00-1.00-------
................................................................................................................GATGATGACTGGGACG.......................................................................................................................... 1620.500.500.50--------
.........................................................................................................................................................................................................................ACAGAGTGCCTTCCAG................. 1620.500.50-------0.50-