ID: uc002mxt.2_intron_11_0_chr19_14071393_f
GENE: (12)
chr19:14071343-14071801+


(1)
AGO1.ip 		(2)
AGO2.ip 		(1)
B-CELL 		(3)
BRAIN 		(8)
BREAST 		(12)
CELL-LINE 		(4)
HEART 		(2)
HELA 		(4)
LIVER 		(1)
OTHER 		(1)
RRP40.ip 		(20)
SKIN 		(1)
TESTES

Sense strand
GAGCAGCGGCCGCTACGTCAACAGGATGACCAATGAGGCGCTGCACAAAGGTGGGGCTCGGTGACCCCGTGATGGTCAGGGTCACCAGGAACACTTGTCCTCACCCAGGAGCTGATTCCTGAGCGCTGATGAAATGGGTGGGAAGGCTGGTGAGGAGAGGGCAGCCCAGGCCAGGCCCAGCTCAGCAGCCCTGAAAGTGTGGGGCCTGGGAGCCTCCCACCAGTCATGGCCTGGCTGGTCACTCATTCACGCTACATTTATTGGGTAGCTGCAGGCTAGAGGTGGAGGGCAACTCAGCAGGGTCCCTGCCTTCTGGAACCTTCTGGGCCAGAAGCAAGTCAGGTGGAGGGTGTGGCCGCAGGGCCAGGCAGGCAGGGGCTCTATGCTTTGTCTCCACCTGTCCCTGTAGGGTGCTCCCTGAAGGTTCTGGCGGACAGCGAGCGATATACGTGGATCGTG
............................................................................................................................................................................................................................................................................(((((((....(((((((.(((((..((..((((((((((((((((((.....(((((((((...((...((....))...)).))))).)))).))))).))))))))))))).))..))))))))))))...)))))))..................................................
...........................................................................................................................................................................................................................................................................268..........................................................................................................................................409................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038859(GSM458542)
MM386. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191429(GSM715539)
166genomic small RNA (size selected RNA from . (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR189786SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		SRR191561(GSM715671)
80genomic small RNA (size selected RNA from t. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...................................................................................................................................................................................................................................................................................................................................................................................................TTGTCTCCACCTGTCCCTGTAGA.................................................2319.009.006.00-------1.00-------------------1.00--1.00---------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................TTGTCTCCACCTGTCCCTGTAG..................................................2219.009.00------1.00---1.00-1.00------------1.00---------------1.00-----1.00--1.00-1.00---1.00--
..................................................................................................................................................................................................................................................................................................................................................................................................TTTGTCTCCACCTGTCCCTGTAG..................................................2317.007.002.00-----2.001.00--------------------------1.00-------1.00----------------
...................................................................................................................................................................................................................................................................................................................................................................................................TTGTCTCCACCTGTCCCTGTAGT.................................................2315.009.00---3.00---------------1.00----------1.00----------------------------
...............................................................................................................................................................................................................................................................................................................................................AAGTCAGGTGGAGGGTGTGGCCGCAGGGCCAGGCAGGCAGGGGCTCTATGCTTTGTCTCCACCTGTCCCTGTAG..................................................7415.005.00--5.00--------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................TTTGTCTCCACCTGTCCCTGTAGT.................................................2414.007.00-----1.00-----2.00-----1.00-----------------------------------------
...................AACAGGATGACCAATGAGGCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002.00---------------------1.00----------1.00--------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGGTTCTGGCGGACAGCGAGCGATA.............2812.002.00-2.00---------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGGTTCTGGCGGACAGCGAGCGA...............2612.002.00--------1.00-------------------------------------1.00------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGGACAGCGAGCGATATACGTGGATCGTG3211.001.00----1.00------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTCTGGCGGACAGCGAGCGAT..............2311.001.00------------------1.00----------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................TTTGTCTCCACCTGTCCCTTTAT..................................................231.000.00----1.00------------------------------------------------------
.................................TGAGGCGCTGCACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00-------------------------------------------------------1.00---
................................................................................................................................................................................................................................................................................AGGCTAGAGGTGGAGTGGG........................................................................................................................................................................191.000.00---------1.00-------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGTTCTGGCGGACAGCGAGCGATATAC..........2911.001.00---------------------------------------------------1.00-------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGCGGACAGCGAGCGACATG...........231.000.00------------------------------------------------1.00----------
..................................................GTGGGGCTCGGTGACCCCGTGATGGTCAGG...........................................................................................................................................................................................................................................................................................................................................................................................3011.001.00-------------------------------------1.00---------------------
...................................................................................................................................................................................................................................................................................................................................................................................................TTGTCTCCACCTGTCCCTGTAGAT................................................2411.009.00-----------------------------------1.00-----------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGAAGGTTCTGGCGGA.........................1811.001.00--------------1.00--------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................CCCTGAAGGTTCTGGCGGACAACG....................241.000.00-1.00---------------------------------------------------------
...................................................................................................................................................................................................AGTGTGGGGCCTGGG.........................................................................................................................................................................................................................................................1501.001.00----------1.00------------------------------------------------
......CGGCCGCTACGTCAACAGGATGACC............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00------------1.00----------------------------------------------
...............................AATGAGGCGCTGCACATTCA........................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00-------------1.00---------------------------------------------
...........................................................................................................................................GGGAAGGCTGGTGAGCGCG.............................................................................................................................................................................................................................................................................................................191.000.00----------------1.00------------------------------------------
......................AGGATGACCAATGAGGCGCTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00-------------------------------------------------1.00---------
..................................................................................................................ATTCCTGAGCGCTGATGAAATGG..................................................................................................................................................................................................................................................................................................................................2311.001.00-----------------------1.00-----------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTCTGGCGGACAGCGAG..................1911.001.00---------------------------------------1.00-------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGTTCTGGCGGACAGCGA...................2011.001.00--------------------------------------1.00--------------------
.......................GGATGACCAATGAGGCGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00-------------1.00---------------------------------------------
...................................................................................................................................................................................................................................................................ATTGGGTAGCTGCAGGCTAGAGGTGGAGGGCA........................................................................................................................................................................3211.001.00------------------------1.00----------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGACAGCGAGCGATATA...........2011.001.00----------------------------------------1.00------------------
...................AACAGGATGACCAATGAGGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-----------------------------------------------------1.00-----
................................ATGAGGCGCTGCACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00---------------------------------------------1.00-------------
..................................................................................................................................................................................................................................................................................................................................................................................................TTTGTCTCCACCTGTCCCTGAAGA.................................................241.000.00-----1.00-----------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGTTCTGGCGGACAGCGAG..................2211.001.00-1.00---------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................TCCCTGCCTTCTGGACTG...........................................................................................................................................181.000.00---------------------------------------------------------1.00-
................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGAAGGTTCTGGCGGACAGC.....................2211.001.00---------------1.00-------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................GTCAGGTGGAGGGTGGTT........................................................................................................181.000.00-----------------------------1.00-----------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTGCTCCCTGAAGGTTCTGGCGG..........................2611.001.00----1.00------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGTTCTGGCGGACAGCGAGCGATATA...........2911.001.00-1.00---------------------------------------------------------
........................GATGACCAATGAGGCGCTGCACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00----------------------1.00------------------------------------
...........................................................................................CACTTGTCCTCACCCAGGAGCTGA........................................................................................................................................................................................................................................................................................................................................................2411.001.00-------1.00---------------------------------------------------
....................ACAGGATGACCAATGAGGCGCTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00-1.00---------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................TTGTCTCCACCTGTCCCTTTAG..................................................221.000.00--------------------------1.00--------------------------------
..................................................................................................................................................CTGGTGAGGAGAGGGC.........................................................................................................................................................................................................................................................................................................1680.120.12----------------------------------------------------------0.12

Antisense strand
GAGCAGCGGCCGCTACGTCAACAGGATGACCAATGAGGCGCTGCACAAAGGTGGGGCTCGGTGACCCCGTGATGGTCAGGGTCACCAGGAACACTTGTCCTCACCCAGGAGCTGATTCCTGAGCGCTGATGAAATGGGTGGGAAGGCTGGTGAGGAGAGGGCAGCCCAGGCCAGGCCCAGCTCAGCAGCCCTGAAAGTGTGGGGCCTGGGAGCCTCCCACCAGTCATGGCCTGGCTGGTCACTCATTCACGCTACATTTATTGGGTAGCTGCAGGCTAGAGGTGGAGGGCAACTCAGCAGGGTCCCTGCCTTCTGGAACCTTCTGGGCCAGAAGCAAGTCAGGTGGAGGGTGTGGCCGCAGGGCCAGGCAGGCAGGGGCTCTATGCTTTGTCTCCACCTGTCCCTGTAGGGTGCTCCCTGAAGGTTCTGGCGGACAGCGAGCGATATACGTGGATCGTG
............................................................................................................................................................................................................................................................................(((((((....(((((((.(((((..((..((((((((((((((((((.....(((((((((...((...((....))...)).))))).)))).))))).))))))))))))).))..))))))))))))...)))))))..................................................
...........................................................................................................................................................................................................................................................................268..........................................................................................................................................409................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038859(GSM458542)
MM386. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191429(GSM715539)
166genomic small RNA (size selected RNA from . (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR189786SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		SRR191561(GSM715671)
80genomic small RNA (size selected RNA from t. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
............................................................................................................GAGCTGATTCCTGAGGG.............................................................................................................................................................................................................................................................................................................................................. 171.000.00-------------------------------------------1.00---------------
.......................................................................................................................................................................................................................................................................................AGGTGGAGGGCAACTCAGGG................................................................................................................................................................ 201.000.00---------------------------------1.00-------------------------
.............................................................................................CTTGTCCTCACCCAGAGGC........................................................................................................................................................................................................................................................................................................................................................... 191.000.00------------------------------------------------------1.00----
.......................................................................................................................................................GAGGAGAGGGCAGCCGGGA................................................................................................................................................................................................................................................................................................. 191.000.00---------1.00-------------------------------------------------
.......................GGATGACCAATGAGGGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................. 181.000.00---1.00-------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................CAGGGTCCCTGCCTTGGGT............................................................................................................................................... 191.000.00------------------------------------1.00----------------------
..........................TGACCAATGAGGCGCTGACA............................................................................................................................................................................................................................................................................................................................................................................................................................. 201.000.00-----1.00-----------------------------------------------------
.......................................................................................................................................................................................................................................................................................................AGCAGGGTCCCTGCCTTCAT................................................................................................................................................ 201.000.00--------------------------------------------1.00--------------
...........................................................................................................................................................................................................................TGAGTGACCAGCCAGGCCATGACTGG...................................................................................................................................................................................................................... 2611.001.00--------------------1.00--------------------------------------
....................................................................................................................................................................CCCAGGCCAGGCCCAATGC.................................................................................................................................................................................................................................................................................... 191.000.00---------------------------1.00-------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTCGCTGTCCGCC................ 1540.250.25----0.25------------------------------------------------------