ID: uc002mxe.2_intron_0_0_chr19_13875535_f
GENE: (1)
chr19:13875485-13875734+


(4)
AGO2.ip
(1)
BRAIN
(4)
BREAST
(6)
CELL-LINE
(4)
CERVIX
(1)
HEART
(1)
HELA
(2)
LIVER
(4)
OTHER
(7)
SKIN

Sense strand
AGGCGGTGGGCTCGGTGCACCAGGCCTGGGAGGCCATCCGCGCCATGAAGGTGCAGCGGGGCGGCGGGGCGGCGGGGCGGCGGGGCGGCGGGGCGGCGGGGCGGCGGGGCGGCGGGGCGGCGGGGCGGCGGGGCGGCCGGGTTGGAGGTGGGAGTGCGCCCGCGCCTGCAGCTTCCGACGCCCAAATCCCTGCCCCGCAGGTGCGGGGCGCCCCGGCCATAGCCCTGGTGGGCTGTCTCAGCCTCGCCGT
............................................................((.((...((.((...((.((...........)).))...)).))...)).)).........................................................................................................................................
.........................................................58.......................................................115.....................................................................................................................................
SizePerfect hitTotal NormPerfect NormGSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
TAX577580(Rovira)
total RNA. (breast)
GSM532876(GSM532876)
G547T. (cervix)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925PAZD5SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR040008(GSM532893)
G727N. (cervix)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR189784SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR189785TAX577739(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR040035(GSM532920)
G001T. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR343336
..............................................................GGCGGGGCGGCGGGGCG...........................................................................................................................................................................17048.0048.0016.00-16.008.00------8.00-------------------
............................................................................................GCGGCGGGGCGGCGGTGGC...........................................................................................................................................19016.008.00-8.00-----8.00----------------------
................................................................CGGGGCGGCGGGGCGGAC........................................................................................................................................................................189.000.00-9.00----------------------------
.........................................................GGGGCGGCGGGGCGGTGGA..............................................................................................................................................................................199.000.00------9.00-----------------------
.........................................................GGGGCGGCGGGGCGGTCGG..............................................................................................................................................................................199.000.00-----9.00------------------------
............................................................GCGGCGGGGCGGCGG...............................................................................................................................................................................1508.008.00----------------8.00-------------
...................................................................GGCGGCGGGGCGGCGGGG.....................................................................................................................................................................1808.008.00---8.00--------------------------
......................................................................GGCGGGGCGGCGGGGC....................................................................................................................................................................1608.008.008.00-----------------------------
...................................................................................................GGCGGCGGGGCGGCGGTGG....................................................................................................................................198.000.00------------8.00-----------------
..........................................................................GGGCGGCGGGGCGGCGGTT.............................................................................................................................................................198.000.00---------8.00--------------------
.............................................................................CGGCGGGGCGGCGGGGTG...........................................................................................................................................................1808.008.00-------------8.00----------------
..................................................................................GGGCGGCGGGGCGGCGGGAG....................................................................................................................................................208.000.00--------8.00---------------------
...........................................................GGCGGCGGGGCGGCGACT.............................................................................................................................................................................1808.008.00----8.00-------------------------
..................................................................................GGGCGGCGGGGCGGCGGTG.....................................................................................................................................................198.000.00---------------8.00--------------
...................................................................................................GGCGGCGGGGCGGCGGTGGC...................................................................................................................................208.000.00-----------8.00------------------
..................................................................................................................GGGCGGCGGGGCGGCGTGG.....................................................................................................................198.000.00-----------------8.00------------
...................................................................................................................GGCGGCGGGGCGGCG........................................................................................................................1508.008.008.00-----------------------------
.............................................................................................CGGCGGGGCGGCGGGG.............................................................................................................................................1608.008.00--------------8.00---------------
.......GGGCTCGGTGCACCAGGGAA...............................................................................................................................................................................................................................201.000.00------------------1.00-----------
..........................................................................................................................................................................................................GCGGGGCGCCCCGGCGGG..............................181.000.00----------------------1.00-------
.......GGGCTCGGTGCACCAGAGAT...............................................................................................................................................................................................................................201.000.00------------------1.00-----------
.................CACCAGGCCTGGGAGGGGC......................................................................................................................................................................................................................191.000.00-----------------------1.00------
....................................................................................................................................GCGGCCGGGTTGGAGGTGGGAGTGCT............................................................................................261.000.00----------------------------1.00-
......................................................AGCGGGGCGGCGGGGCGGAG................................................................................................................................................................................201.000.00--1.00---------------------------
...........................GGGAGGCCATCCGCGCCTAG...........................................................................................................................................................................................................201.000.00-------------------1.00----------
...........................................................................................................................GGCGGCGGGGCGGCCTGT.............................................................................................................181.000.00-------------------------1.00----
...........................................................................................................................GGCGGCGGGGCGGCCCGGC............................................................................................................191.000.00--------------------1.00---------
............................................................................................................................................................................................................GGGGCGCCCCGGCCATAGCCCTGGTGGGCT................3011.001.00----1.00-------------------------
..............................................................................................................................................TGGAGGTGGGAGTGCTCG..........................................................................................181.000.00---------------------1.00--------

Antisense strand
AGGCGGTGGGCTCGGTGCACCAGGCCTGGGAGGCCATCCGCGCCATGAAGGTGCAGCGGGGCGGCGGGGCGGCGGGGCGGCGGGGCGGCGGGGCGGCGGGGCGGCGGGGCGGCGGGGCGGCGGGGCGGCGGGGCGGCCGGGTTGGAGGTGGGAGTGCGCCCGCGCCTGCAGCTTCCGACGCCCAAATCCCTGCCCCGCAGGTGCGGGGCGCCCCGGCCATAGCCCTGGTGGGCTGTCTCAGCCTCGCCGT
............................................................((.((...((.((...((.((...........)).))...)).))...)).)).........................................................................................................................................
.........................................................58.......................................................115.....................................................................................................................................
SizePerfect hitTotal NormPerfect NormGSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
TAX577580(Rovira)
total RNA. (breast)
GSM532876(GSM532876)
G547T. (cervix)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925PAZD5SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR040008(GSM532893)
G727N. (cervix)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR189784SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR189785TAX577739(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR040035(GSM532920)
G001T. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR343336
....CCCAGGCCTGGTGCACCGAGCCCACC............................................................................................................................................................................................................................ 2611.001.00------------------------1.00-----
..........................................................................................................................................................................................................GCGGGGCGCCCCGGCGGG.............................. 181.000.00------------------1.00-----------
..........................................................................................................................................................................................................GCGGGGCGCCCCGGCGGGC............................. 191.000.00--------------------------1.00---
......................................................................................................................................ACCTCCAACCCGGCC..................................................................................................... 1530.330.33-----------------------------0.33