ID: uc002mwr.2_intron_0_0_chr19_13261367_f.5p
GENE: (1)
chr19:13261317-13261566+


(1)
AGO2.ip 		(5)
B-CELL 		(16)
BREAST 		(21)
CELL-LINE 		(15)
CERVIX 		(9)
HEART 		(2)
HELA 		(6)
LIVER 		(2)
OTHER 		(2)
RRP40.ip 		(67)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
CCTCGGATTGTTCCTGCGCAACTTCAGTTTCCCTTCCAGGCACGGGCAATGTAAATAATGATAGCCTCCCTCATCTCTGGCGGCTGGGTATTATGGCTGGGGAAGGGGCTCATTCGATTCGTTGAAGCTTTTCATGGACTCCCTGAGCTGGCACCTGGGAGATCGTCCCATCCCAGGGTCCCGAGTGTCAGGTTTGGCTAGGGTCTGGGGGAGAGGTGGTCCTCCCTTCTCCCTGCGGGGGCGCGGTGAG
..............................................(((((.....(((((..(((((.....((((..((..............))..)))).)))))))))).....)))))..............................................................................................................................
............................................45..................................................................................129.......................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577741(Rovira)
total RNA. (breast)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		TAX577744(Rovira)
total RNA. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532877(GSM532877)
G691N. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577453(Rovira)
total RNA. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		TAX577746(Rovira)
total RNA. (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577739(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532871(GSM532871)
G652N. (cervix)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR040022(GSM532907)
G575N. (cervix)		SRR040014(GSM532899)
G623N. (cervix)		SRR038859(GSM458542)
MM386. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR038853(GSM458536)
MELB. (cell line)		SRR040024(GSM532909)
G613N. (cervix)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532883(GSM532883)
G871N. (cervix)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR040010(GSM532895)
G529N. (cervix)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR040021(GSM532906)
G761T_2. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		GSM532881(GSM532881)
G696N. (cervix)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040012(GSM532897)
G648N. (cervix)		SRR040032(GSM532917)
G603N. (cervix)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532887(GSM532887)
G761N. (cervix)		SRR040020(GSM532905)
G699N_2. (cervix)		TAX577745(Rovira)
total RNA. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
......................................................................................................................................................................................................................................CCCTGCGGGGGCGCGCCGG.193222.334.0011.3311.67--0.679.006.337.006.677.006.004.675.004.336.002.675.334.675.334.004.675.003.674.004.333.673.67---4.001.671.671.333.003.002.333.333.00-3.002.33-1.672.671.332.002.002.002.330.672.000.331.331.00-1.67---2.001.002.00--1.671.671.671.671.001.330.671.001.001.330.330.330.330.67-0.331.33-0.67----0.671.00-0.67-------0.331.00--------1.00---1.00-0.670.670.67-0.670.670.670.330.330.33---0.330.33-0.33--0.330.330.33-0.330.33--0.330.33--
......................................................................................................................................................................................................................................CCCTGCGGGGGCGCGCCG..18310.004.000.33-----0.33-0.670.67---0.33-0.330.33--0.670.33--0.67-0.330.33------1.00------------0.33---0.33----------0.33-------0.33-----------------------------0.67-----------------------0.33------0.33--0.33---0.33---0.33----
......................................................................................................................................................................................................................................CCCTGCGGGGGCGCGC....1638.674.000.33------0.67-0.33-1.330.330.67--0.330.33----0.33--0.33--------0.670.33-------------------------0.67----------0.330.33-----0.67--------0.33-----------------------------0.33---------------------------
............................................................................................................CTCATTCGATTCGTTGA.............................................................................................................................1717.007.00--7.00-----------------------------------------------------------------------------------------------------------------------------------------------
.........................................ACGGGCAATGTAAATAATGATAGC.........................................................................................................................................................................................2415.005.00----------1.00------1.00----------2.00----------------------------------1.00----------------------------------------------------------------------------------
......................................................................................................................................................................................................................................CCCTGCGGGGGCGCGCC...1734.674.00-0.33-----0.330.330.33--------------0.33--------0.67------------0.330.33---0.33----0.33----------------------0.33------------------------------------------0.33-----------------0.33-----
...............................................AATGTAAATAATGATAGC.........................................................................................................................................................................................1834.334.33--4.33-----------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................CCCTGCGGGGGCGCG.....1534.004.000.33-----0.33--0.33-0.33-----------------------0.33-----0.67---------------------------0.33---------0.33---0.33-------0.33--------------------------0.33---------------------------
...........................................................................................TATGGCTGGGGAAGGGGCTCA..........................................................................................................................................2114.004.00---------------------------4.00----------------------------------------------------------------------------------------------------------------------
..........................................................................................................................TGAAGCTTTTCATGGACTCCCTGAGC......................................................................................................2613.003.00----3.00---------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................TCCCTGCGGGGGCGCGCCGG.203.000.00------1.00-----------------------------1.00-------------------------------------------------------1.00-----------------------------------------------------
.....................................................................CTCATCTCTGGCGGCTGGG..................................................................................................................................................................1913.003.00---3.00----------------------------------------------------------------------------------------------------------------------------------------------
............................................................................CTGGCGGCTGGGTATTATGGCTGGG.....................................................................................................................................................2513.003.00---3.00----------------------------------------------------------------------------------------------------------------------------------------------
...............................................................GCCTCCCTCATCTCTGGCG........................................................................................................................................................................1912.002.00---------------------------------------------------------2.00----------------------------------------------------------------------------------------
..........................................CGGGCAATGTAAATAATG..............................................................................................................................................................................................1812.002.00---------------1.00----------------------------------------------------------------------------------------1.00-----------------------------------------
..........................................................................................................................................CTCCCTGAGCTGGCACCTGGGA..........................................................................................2212.002.00---------------------------------------------1.00---------1.00------------------------------------------------------------------------------------------
............................................................................CTGGCGGCTGGGTATTAT............................................................................................................................................................1812.002.00-------------------------------2.00------------------------------------------------------------------------------------------------------------------
............................TTCCCTTCCAGGCACGGGCAAT........................................................................................................................................................................................................2212.002.00-----------------------------------------------------------------------------------------------1.00--------------1.00-----------------------------------
..TCGGATTGTTCCTGCGC.......................................................................................................................................................................................................................................1712.002.00---------------------------------------------------------------------------1.001.00---------------------------------------------------------------------
.........................................................................................................................................ACTCCCTGAGCTGGCACCTGGGA..........................................................................................2312.002.00----------------------------------------------------------------2.00---------------------------------------------------------------------------------
...........................TTTCCCTTCCAGGCACGGGCAA.........................................................................................................................................................................................................2212.002.00----------------------------------------------------------2.00---------------------------------------------------------------------------------------
.........................................ACGGGCAATGTAAATAATGATA...........................................................................................................................................................................................2212.002.00---------------------------------------------------------------1.00-------1.00--------------------------------------------------------------------------
.........................................ACGGGCAATGTAAATAATGA.............................................................................................................................................................................................2012.002.00----------------------------2.00---------------------------------------------------------------------------------------------------------------------
................................................................................................CTGGGGAAGGGGCTCATTC.......................................................................................................................................1912.002.00-----------------------------------------------------------1.00------------------------------------------------1.00-------------------------------------
........................................CACGGGCAATGTAAATAAT...............................................................................................................................................................................................1912.002.00---------------1.00----------------1.00-----------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................GGGAGAGGTGGTCCTAGCT.......................191.000.00----------------------------------------------------------------------------------------------1.00---------------------------------------------------
.........................................................................TCTCTGGCGGCTGGGTATTAT............................................................................................................................................................2111.001.00----------------------------------------------------------------------------------------------------------1.00---------------------------------------
.CTCGGATTGTTCCTGCG........................................................................................................................................................................................................................................1711.001.00------------------------------------------------------1.00-------------------------------------------------------------------------------------------
...................................................................CCCTCATCTCTGGCGGCTGGG..................................................................................................................................................................2111.001.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................ATGGACTCCCTGAGCTGGCATA...............................................................................................221.000.00---------------------------------------------------------------------------------------------------------------1.00----------------------------------
..........................................................................CTCTGGCGGCTGGGTAT...............................................................................................................................................................1711.001.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................CTGGCACCTGGGAGATCGT....................................................................................1911.001.00----------------------------------------------------------------------------------------------------------------1.00---------------------------------
............................................................................................ATGGCTGGGGAAGGGGGGT...........................................................................................................................................191.000.00---------------------------------------------------------------------------------------1.00----------------------------------------------------------
.........................................................................................................................................ACTCCCTGAGCTGGCACCTGGGAA.........................................................................................2411.002.00-----------------------------------------------------------------------------------------------------1.00--------------------------------------------
.................................................................................................................................TTTCATGGACTCCCTGAGCTGGCACCTG.............................................................................................2811.001.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------
.........................................ACGGGCAATGTAAATAATG..............................................................................................................................................................................................1911.001.00-----------------------------------------------------------------------------------------------------------1.00--------------------------------------
................................CTTCCAGGCACGGGCAATGTAAATAAT...............................................................................................................................................................................................2711.001.00--------------------------------1.00-----------------------------------------------------------------------------------------------------------------
.CTCGGATTGTTCCTGCGCAACT...................................................................................................................................................................................................................................2211.001.00-------------1.00------------------------------------------------------------------------------------------------------------------------------------
........................................CACGGGCAATGTAAATAATGAT............................................................................................................................................................................................2211.001.00----------------------------------------------------1.00---------------------------------------------------------------------------------------------
..................................TCCAGGCACGGGCAATGTAAATAA................................................................................................................................................................................................2411.001.00------------------------------------------------------------------------------------------1.00-------------------------------------------------------
........................................................................ATCTCTGGCGGCTGGGTA................................................................................................................................................................1811.001.00------------------------------------------1.00-------------------------------------------------------------------------------------------------------
..................................................................................................................................TTCATGGACTCCCTGATAG.....................................................................................................191.000.00--------------------------------------------------------------------------------------1.00-----------------------------------------------------------
..........................................CGGGCAATGTAAATAATGATAGC.........................................................................................................................................................................................2311.001.00--------------------------------------------------------------------------------1.00-----------------------------------------------------------------
.......................................GCACGGGCAATGTAAATAAT...............................................................................................................................................................................................2011.001.00-----------------------------1.00--------------------------------------------------------------------------------------------------------------------
........................................CACGGGCAATGTAAATAA................................................................................................................................................................................................1811.001.00------------------------------------------1.00-------------------------------------------------------------------------------------------------------
......................................................................TCATCTCTGGCGGCTGGGTA................................................................................................................................................................2011.001.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................GGTATTATGGCTGGGCGAT.................................................................................................................................................191.000.00-------------------------------------------------------1.00------------------------------------------------------------------------------------------
.................................................................................................................................TTTCATGGACTCCCTGAGCTGGC..................................................................................................2311.001.00---------------------------------------------------------------------------------------------1.00----------------------------------------------------
......................................................................TCATCTCTGGCGGCTGGGTATTATGGC.........................................................................................................................................................2711.001.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................AGTGTCAGGTTTGGCTAGGGTCTGGGGGA......................................2911.001.00-----------------------------1.00--------------------------------------------------------------------------------------------------------------------
......................................................................................................AAGGGGCTCATTCGATTCGTTG..............................................................................................................................2211.001.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------
........................................CACGGGCAATGTAAATAATGATAGCCTC......................................................................................................................................................................................2811.001.00-------------------------------------------------------------------------------------1.00------------------------------------------------------------
......................................................................................................................................................................................................................................CCCTGCGGGGGCGCGCTGG.1931.004.00------------------0.33-----------------------------0.33-----------------------------0.33-------------------------------------------------------------------
...................................................................CCCTCATCTCTGGCGGCTGTG..................................................................................................................................................................211.000.00------------------------------------------1.00-------------------------------------------------------------------------------------------------------
..........................................................................................................................................CTCCCTGAGCTGGCACCTGGTAA.........................................................................................231.000.00-------------------------------------------------------------------------------------------------1.00------------------------------------------------
.....................................................................................................................................................................................................................................TCCCTGCGGGGGCGCGC....171.000.00--------------------------------------------------------------------------------------------------1.00-----------------------------------------------
................................................................................................CTGGGGAAGGGGCTCATT........................................................................................................................................1811.001.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................TCATGGACTCCCTGAGCTGGC..................................................................................................2111.001.00-------------------------------------------1.00------------------------------------------------------------------------------------------------------
..................................................................................................................................TTCATGGACTCCCTGAGCTGGC..................................................................................................2211.001.00-----------------------------1.00--------------------------------------------------------------------------------------------------------------------
.....................................AGGCACGGGCAATGTAAATA.................................................................................................................................................................................................2011.001.00-----------------------------------------------------------------------------1.00--------------------------------------------------------------------
.................................................................CTCCCTCATCTCTGGCGGCTG....................................................................................................................................................................2111.001.00-------------------------------------------------------------------------------------------------------1.00------------------------------------------
.................................TTCCAGGCACGGGCAATG.......................................................................................................................................................................................................1811.001.00----------------------1.00---------------------------------------------------------------------------------------------------------------------------
..TCGGATTGTTCCTGCGCAAC....................................................................................................................................................................................................................................2011.001.00------1.00-------------------------------------------------------------------------------------------------------------------------------------------
.................................................TGTAAATAATGATAGCCTCCCTCA.................................................................................................................................................................................2411.001.00-------1.00------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................TTGAAGCTTTTCATGGACTCCCTGA........................................................................................................2511.001.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------
..............................CCCTTCCAGGCACGGGCAATGTAT....................................................................................................................................................................................................241.000.00------------------------------------------------------------------------------------1.00-------------------------------------------------------------
................................................................................................................................TTTTCATGGACTCCCTGAGCTGGCACCT..............................................................................................2811.001.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................TTTCATGGACTCCCTGAGCTGG...................................................................................................2211.001.00------------1.00-------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................GCTGGGGAAGGGGCTCATA........................................................................................................................................191.000.00------------------------------------------------------------------------------------------------------1.00-------------------------------------------
......................................................................................................................................................................CCCATCCCAGGGTCCCGAGTGTCAGG..........................................................2611.001.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------
.....................................AGGCACGGGCAATGTAAATAA................................................................................................................................................................................................2111.001.00-----------------------------------------------------1.00--------------------------------------------------------------------------------------------
.....................................................AATAATGATAGCCTCCCT...................................................................................................................................................................................1811.001.00--------1.00-----------------------------------------------------------------------------------------------------------------------------------------
...........................................GGGCAATGTAAATAATGATA...........................................................................................................................................................................................2011.001.00-------------------1.00------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................CCTGCGGGGGCGCGGTGGGT201.000.00--------------------------------------------------1.00-----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................TCCCTGCGGGGGCGCGCCGC.201.000.00----------------------------------------------------1.00---------------------------------------------------------------------------------------------
.........................................................................................................GGGCTCATTCGATTCGTTGAAG...........................................................................................................................2211.001.00-----------------------------1.00--------------------------------------------------------------------------------------------------------------------
..............................................................................................GGCTGGGGAAGGGGCTCATTC.......................................................................................................................................2111.001.00-----------------------------------------------------------1.00--------------------------------------------------------------------------------------
....................................................................................................................................CATGGACTCCCTGAGCTGGC..................................................................................................2011.001.00----------------------------------------------------------------------------------1.00---------------------------------------------------------------
.........................................................................................ATTATGGCTGGGGAAGGGGC.............................................................................................................................................2011.001.00------------------------------------------------------------------------------------------------1.00-------------------------------------------------
......................................................................................................................................................................................................................................CCCTGCGGGGGCGCGCCGC.1930.674.00---------------------------------0.33-----------0.33----------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................CCCTGCGGGGGCGCGCCCG.1930.674.00-----0.330.33-------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................CCCTGCGGGGGCGCGT....1630.334.00--------------------------0.33-----------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................CCCTGCGGGGGCGCGCCT..1830.334.00---------------------------------0.33----------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................CCCTGCGGGGGCGCGACGG.1930.334.00----------------------------------------------------------------------0.33---------------------------------------------------------------------------
......................................................................................................................................................................................................................................CCCTGCGGGGGCGCGTTGG.1930.334.00------------------------------------------------------------------------------0.33-------------------------------------------------------------------
......................................................................................................................................................................................................................................CCCTGCGGGGGCGCGCA...1730.334.00------------------------------------------------------------------------------------------------------------------------------------0.33-------------
......................................................................................................................................................................................................................................CCCTGCGGGGGCGCGCGGC.1930.334.00--------------------------------------------------0.33-----------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................CCCTGCGGGGGCGCGTCGG.1930.334.00--------------0.33-----------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................CCCTGCGGGGGCGCGCCTG.1930.334.00-0.33------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................CCCTGCGGGGGCGCGCCGT.1930.334.00---------------0.33----------------------------------------------------------------------------------------------------------------------------------
............................................................................................ATGGCTGGGGAAGGGGCT............................................................................................................................................1840.250.25-------------------------------------------------------------------------------------------------------------------------------------------------0.25
............................TTCCCTTCCAGGCACG..............................................................................................................................................................................................................1650.200.20----------------------------------------------------------------------------------------------------------------------------0.20---------------------
........................................................................................TATTATGGCTGGGGA...................................................................................................................................................1580.120.12--------0.12-----------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
CCTCGGATTGTTCCTGCGCAACTTCAGTTTCCCTTCCAGGCACGGGCAATGTAAATAATGATAGCCTCCCTCATCTCTGGCGGCTGGGTATTATGGCTGGGGAAGGGGCTCATTCGATTCGTTGAAGCTTTTCATGGACTCCCTGAGCTGGCACCTGGGAGATCGTCCCATCCCAGGGTCCCGAGTGTCAGGTTTGGCTAGGGTCTGGGGGAGAGGTGGTCCTCCCTTCTCCCTGCGGGGGCGCGGTGAG
..............................................(((((.....(((((..(((((.....((((..((..............))..)))).)))))))))).....)))))..............................................................................................................................
............................................45..................................................................................129.......................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577741(Rovira)
total RNA. (breast)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		TAX577744(Rovira)
total RNA. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532877(GSM532877)
G691N. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577453(Rovira)
total RNA. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		TAX577746(Rovira)
total RNA. (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577739(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532871(GSM532871)
G652N. (cervix)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR040022(GSM532907)
G575N. (cervix)		SRR040014(GSM532899)
G623N. (cervix)		SRR038859(GSM458542)
MM386. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR038853(GSM458536)
MELB. (cell line)		SRR040024(GSM532909)
G613N. (cervix)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532883(GSM532883)
G871N. (cervix)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR040010(GSM532895)
G529N. (cervix)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR040021(GSM532906)
G761T_2. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		GSM532881(GSM532881)
G696N. (cervix)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040012(GSM532897)
G648N. (cervix)		SRR040032(GSM532917)
G603N. (cervix)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532887(GSM532887)
G761N. (cervix)		SRR040020(GSM532905)
G699N_2. (cervix)		TAX577745(Rovira)
total RNA. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
.......................................................TAATGATAGCCTCCCTACTT............................................................................................................................................................................... 201.000.00---------------------------------------1.00----------------------------------------------------------------------------------------------------------
............TGGAAGGGAAACTGAAGTTGCGCAGG.................................................................................................................................................................................................................... 2611.001.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------
.....................CTTCAGTTTCCCTTCGGTC.................................................................................................................................................................................................................. 191.000.00---------------1.00----------------------------------------------------------------------------------------------------------------------------------
..............................................CAATGTAAATAATGATAGT......................................................................................................................................................................................... 191.000.00------------------------------------------------------------------------------------------------------------------1.00-------------------------------
......................................................ATAATGATAGCCTCCCTCTT................................................................................................................................................................................ 201.000.00---------------------------------------1.00----------------------------------------------------------------------------------------------------------
....................................................................................................................................................................GACACTCGGGACCCTGGGATGGGAC............................................................. 2511.001.00---------------------------------------------------------------------------------------------------------1.00----------------------------------------
.......................................................TAATGATAGCCTCCCTACT................................................................................................................................................................................ 191.000.00---------------------------------------1.00----------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................GCGGGGGCGCGGTGAGCCC 190.500.00-------------------------------------------------------------------------------------------------------------------------------0.50------------------
..........................................................................................................................................................................................................................................CTCACCGCGCCCCCGC 1620.500.50------------------------------------------------------------------------------------------------------------------------------0.50-------------------
..........................................................................................................................................................................................................................................GCGGGGGCGCGGTGAGCCCC 200.500.00-----------------------------------------------------------------------------------------------------------------------------0.50--------------------
...............................................................CCAGAGATGAGGGAGGC.......................................................................................................................................................................... 1740.250.25------------------------------------------------------------------------------------------------------------------------------------------------0.25-