ID: uc002mwi.2_intron_2_0_chr19_13212010_r.3p
GENE: (1)
chr19:13211960-13212209-


(1)
AGO1.ip
(2)
AGO2.ip
(5)
B-CELL
(3)
BRAIN
(5)
BREAST
(11)
CELL-LINE
(2)
CERVIX
(4)
HEART
(4)
LIVER
(4)
OTHER
(31)
SKIN
(1)
TESTES

Sense strand
CTACTCTAACGTAGGACCCCCCTCCCGTGTCCTGGAAGTTTCTGGGCCTGCCCCCGCCATCTGCCTTTGCCTACTGAAACTTCTCTCCTCCTCCTTTCCCCCTCCCCCTCCCTCCTTCCCATTTGAGGGGTTTCTTGAGCTAAGCAGGTGGGAGCGGGGCACCTAGTCCTCCTCCCCACTGGCTGCCTTCTTTCCCACAGGTGAGTACCCCCACGTCGGGGTCCATGTGCCCGCCTCAGGCACAGGCAGA
........................................................................................................((((((..............))))))......(((...(((.((((((((.(((((.....))))).))))).))).)))...)))............................................................
................................................................................................97.....................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR040018(GSM532903)
G701N. (cervix)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR040014(GSM532899)
G623N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
TAX577738(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
TAX577743(Rovira)
total RNA. (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
...................................................................................................................................................................................TGGCTGCCTTCTTTCCCACAGT.................................................22146.009.003.001.00--2.003.001.001.002.002.001.002.00--1.001.00-2.001.00---1.00-1.001.001.00----1.00---1.00--1.00-1.00---1.001.00----1.001.00-1.00-1.001.00-1.00-1.001.001.001.001.001.001.00---
...................................................................................................................................................................................TGGCTGCCTTCTTTCCCACAGA.................................................22113.009.00-1.00--1.00-------2.00-1.00---1.00-1.00------1.001.00----------1.00--1.00-----1.00--------1.00------------
...................................................................................................................................................................................TGGCTGCCTTCTTTCCCACAG..................................................2119.009.00---1.00--1.00--------1.00-----1.00----------1.00-1.00--1.00---------1.00-1.00--------------------
...................................................................................................................................................................................TGGCTGCCTTCTTTCCCACA...................................................2014.004.00-1.00-----1.00-----2.00--------------------------------------------------------
...................................................................................................................................................................................TGGCTGCCTTCTTTCCCACAGTT................................................2312.009.00---1.00---------------1.00--------------------------------------------------
...................................................................................................................................................................................TGGCTGCCTTCTTTCCCACACC.................................................2212.004.00----------------2.00-----------------------------------------------------
...................................................................................................................................................................................TGGCTGCCTTCTTTCCCACAT..................................................2111.004.001.00---------------------------------------------------------------------
...................................................................................................................................................................................TGGCTGCCTTCTTTCCCACCGT.................................................221.000.00----------------------------------------------1.00-----------------------
................................................................................................................................................................................................................CCCCACGTCGGGGTCACCA.......................191.000.00-------------------------------------------------------------------1.00--
...................................................................................................................................................................................TGGCTGCCTTCTTTCCCACAGTA................................................2311.009.00-1.00--------------------------------------------------------------------
..............................................................................................................................................................................................................ACCCCCACGTCGGGGAT...........................171.000.00-----------------------------------------------------------1.00----------
.....................................................................................................CTCCCCCTCCCTCCTTCTCTT................................................................................................................................211.000.00-----------------------------1.00----------------------------------------
.................................................................................................................................................................................................................CCCACGTCGGGGTCCCCA.......................181.000.00--------------------------------------------------------------------1.00-
..................................................................................................................................................................................CTGGCTGCCTTCTTTCCCACAGAAT...............................................251.000.00------------------------------1.00---------------------------------------
...................................................................................................................................................................................................CACAGGTGAGTACCCCCACGTCGG...............................2411.001.00-------------------------------------------1.00--------------------------
...................................................................................................................................................................................TGGCTGCCTTCTTTCCCACAGAT................................................2311.009.00---1.00------------------------------------------------------------------
..................................................................................................CCCCTCCCCCTCCCTCCTTCTT..................................................................................................................................221.000.00-----------------------------------------1.00----------------------------
...................................................................................................................................................................................TGGCTGCCTTCTTTCCCACATA.................................................2211.004.00------------------------------------------------------1.00---------------
.....................................................................................TCCTCCTCCTTTCCCGTCT..................................................................................................................................................191.000.00----------------------------------------------------1.00-----------------
..................................................................................................................................................................................CTGGCTGCCTTCTTTCCCA.....................................................1920.500.50-------------------0.50--------------------------------------------------
.................................................................................................CCCCCTCCCCCTCCCTCCTTC....................................................................................................................................2140.250.25---------------------------------------------------------------------0.25

Antisense strand
CTACTCTAACGTAGGACCCCCCTCCCGTGTCCTGGAAGTTTCTGGGCCTGCCCCCGCCATCTGCCTTTGCCTACTGAAACTTCTCTCCTCCTCCTTTCCCCCTCCCCCTCCCTCCTTCCCATTTGAGGGGTTTCTTGAGCTAAGCAGGTGGGAGCGGGGCACCTAGTCCTCCTCCCCACTGGCTGCCTTCTTTCCCACAGGTGAGTACCCCCACGTCGGGGTCCATGTGCCCGCCTCAGGCACAGGCAGA
........................................................................................................((((((..............))))))......(((...(((.((((((((.(((((.....))))).))))).))).)))...)))............................................................
................................................................................................97.....................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR040018(GSM532903)
G701N. (cervix)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR040014(GSM532899)
G623N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
TAX577738(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
TAX577743(Rovira)
total RNA. (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
............................................................................................CCTTTCCCCCTCCCCTATC........................................................................................................................................... 194.000.00--4.00-------------------------------------------------------------------
................................................................................TTCTCTCCTCCTCCTTTGGT...................................................................................................................................................... 201.000.00-----------------------1.00----------------------------------------------
.........................................................................................................................................................................................................................CCTGAGGCGGGCACATGGACCCC.......... 2311.001.00---------------------------------1.00------------------------------------
..................................................................................................................................................................CAGTGGGGAGGAGGACTAG..................................................................... 1911.001.00----------1.00-----------------------------------------------------------
..................................................................................................CCCCTCCCCCTCCCTCCCCT.................................................................................................................................... 201.000.00------------------------------------1.00---------------------------------