ID: uc002mls.2_intron_0_0_chr19_9649675_f
GENE: (1)
chr19:9649625-9650131+


(1)
AGO2.ip
(1)
AGO3.ip
(4)
B-CELL
(2)
BRAIN
(4)
BREAST
(19)
CELL-LINE
(1)
CERVIX
(1)
HEART
(1)
HELA
(2)
LIVER
(2)
OTHER
(1)
RRP40.ip
(11)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
CAGGGCGGCCATAGGGGAAGGAGCCAATGTGTTATGCATGTAGAAAATAGGTAACTACGTCTTTTGCTCTGTTACTATTTCAACATTTGATGTAAAAAACATTTTCTATGCAGCTAAAGGAATTGTTTTTAAAAATAATTTCTAGGTTTTCTGCCTTGCTTTAAAACATCTTTTCTTTTTTTTTGAGACAAAATCTCACTCTGTCACCAAGGCTGGAGTTCAGTGGAGCCATCTCAGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCGATTCTCCTGCCTCATCCTCCCAAGTAGCTGGAATTACAGGTGCATGCTGCCACACCCTGCTAATTTTTGTATTTTTAGTAGAGGCAGGGTTTTGCCATGCTGGCCAGGCTGGTCTTGAACTACTTGTCAGGCCTCTGAGCCCAAGTTAAATCATCATAAACCCTGTCACCTGCACGTATACATCCAGATGGCCTGGAGCAACTGAAGAACCACAAAAGAAGTGAAACAGCCAGTTCC
..................................................(((((...((.....))...)))))........(((..(((((.....)))))....))).((((..(((((((((((....))))))))))).)))).......................................................................................................................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150...................................................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189782SRR037938(GSM510476)
293Red. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR189784SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
TAX577743(Rovira)
total RNA. (breast)
SRR029125(GSM416754)
U2OS. (cell line)
SRR189785SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
.....................................................................................................................................................................ACATCTTTTCTTTTTTTTTTTG................................................................................................................................................................................................................................................................................................................................2222.000.00-1.007.001.009.004.00---------------------------------------------
......................................................................................................................................................................CATCTTTTCTTTTTTTTTG..................................................................................................................................................................................................................................................................................................................................19212.0012.00--4.502.502.502.50---------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................TGCCATGCTGGCCAGGCTGGGCTC.........................................................................................................................2410.000.009.001.00-------------------------------------------------
......................................................................................................................................................................CATCTTTTCTTTTTTTTTAAG................................................................................................................................................................................................................................................................................................................................219.000.00--3.004.00-2.00---------------------------------------------
......................................................................................................................................................................CATCTTTTCTTTTTTTAAG..................................................................................................................................................................................................................................................................................................................................198.000.00--2.004.001.001.00---------------------------------------------
....................................................................................................................................................................AACATCTTTTCTTTTTTTTTTG.................................................................................................................................................................................................................................................................................................................................225.000.00--2.00-2.001.00---------------------------------------------
............AGGGGAAGGAGCCAATGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003.00--------------------2.00---------1.00--------------------
...................................................................................................................................................................................................................................................................................................................................................TATTTTTAGTAGAGGCAGGGGTCC................................................................................................................................................243.000.003.00--------------------------------------------------
..................................................................................................................................................................................................................................................................CAGGTTCAAGCGATTCTCCGTT...................................................................................................................................................................................................................................223.000.00------------3.00--------------------------------------
.....................................................................................................................................................................ACATCTTTTCTTTTTTTTTG..................................................................................................................................................................................................................................................................................................................................2013.003.00-----3.00---------------------------------------------
..........................................................................................................................................................................................................................................................................AGCGATTCTCCTGCCTCATCCCCAG........................................................................................................................................................................................................................253.000.003.00--------------------------------------------------
...................................................................................................................................................................................................................................................................AGGTTCAAGCGATTCTCCTGCCACCC..............................................................................................................................................................................................................................262.000.002.00--------------------------------------------------
...............................................................................................................................TTTAAAAATAATTTCTAGG.........................................................................................................................................................................................................................................................................................................................................................................1942.002.00----------------2.00----------------------------------
....................................................................................................................................................................................................................................................................................................................................................ATTTTTAGTAGAGGCAGGGGTCC................................................................................................................................................232.000.002.00--------------------------------------------------
......................................................................................................................................................................CATCTTTTCTTTTTTTTCTTG................................................................................................................................................................................................................................................................................................................................212.000.00---2.00-----------------------------------------------
......................................................................................................................................................................................................................................................................TTCAAGCGATTCTCCTGCCTCATCCCCCG........................................................................................................................................................................................................................292.000.00--2.00------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................TGCCATGCTGGCCAGGCTGGTGTCG........................................................................................................................252.000.00-2.00-------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................TTTTGCCATGCTGGCCAGGCTGGGCTC.........................................................................................................................272.000.002.00--------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................TGCCATGCTGGCCAGGCTGGGCCC.........................................................................................................................242.000.001.001.00-------------------------------------------------
......................................................................................................................................................................................................................................ATCTCAGCTCACTGCAACCTCCACCTGGGG.......................................................................................................................................................................................................................................................302.000.00-2.00-------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................TTTGCCATGCTGGCCAGGCTGGGCTC.........................................................................................................................262.000.002.00--------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................TTTAGTAGAGGCAGGGTCCCC...............................................................................................................................................211.000.00-1.00-------------------------------------------------
....................................................................................................................................................................AACATCTTTTCTTTTTTTTTCTG................................................................................................................................................................................................................................................................................................................................231.000.00---1.00-----------------------------------------------
...................................................................................................................................................................................................................................................................................CCTGCCTCATCCTCCGCT......................................................................................................................................................................................................................181.000.00---------------------------------1.00-----------------
...................................................................................................................................................................AAACATCTTTTCTTTTTTTTTTCT................................................................................................................................................................................................................................................................................................................................241.000.00------1.00--------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................TGCCATGCTGGCCAGGCTGGGA...........................................................................................................................221.000.001.00--------------------------------------------------
...................................................................................................................................................................................................................................................................AGGTTCAAGCGATTCTCCTGCACC................................................................................................................................................................................................................................241.000.001.00--------------------------------------------------
......................................................................................................................................................................CATCTTTTCTTTTTTTTTGAGGG..............................................................................................................................................................................................................................................................................................................................231.000.00------1.00--------------------------------------------
.....CGGCCATAGGGGAAGGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00----------------------------------------------1.00----
......................................................................................................................................................................................................................................................................TTCAAGCGATTCTCCTGCCTCATCCCCCC........................................................................................................................................................................................................................291.000.00------1.00--------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................TGCCATGCTGGCCAGGCTGGGTCT.........................................................................................................................241.000.001.00--------------------------------------------------
.....................................................................................................................................................................ACATCTTTTCTTTTTTGTT...................................................................................................................................................................................................................................................................................................................................191.000.00------1.00--------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................TTTTGCCATGCTGGCCAGGCTGGTCCGG........................................................................................................................281.000.001.00--------------------------------------------------
......................................................................................................................................................................CATCTTTTCTTTTTTTTTCTG................................................................................................................................................................................................................................................................................................................................211.000.00--1.00------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTGAAGAACCACAAAAGAAAA...............241.000.00-----------------------------------1.00---------------
.....................................................................................................................................................................................................................................................................................................................................................TTTTTAGTAGAGGCAGGGTTTTAACG............................................................................................................................................261.000.00-------1.00-------------------------------------------
....................................................................................................................................................................AACATCTTTTCTTTTTTTTTG..................................................................................................................................................................................................................................................................................................................................2111.001.00--1.00------------------------------------------------
............................................................................................................................................................................................................................................................ACCTCCCAGGTTCAAGCGATTCTCCTCCCC.................................................................................................................................................................................................................................301.000.00-1.00-------------------------------------------------
......................................................................................................................................................................................................................................ATCTCAGCTCACTGCAACCTCCACCTCCCACGC....................................................................................................................................................................................................................................................331.000.001.00--------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGCACGTATACATGATC..................................................211.000.00-----------1.00---------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................TTTGCCATGCTGGCCAGGCTGGGT...........................................................................................................................241.000.001.00--------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................TTGCCATGCTGGCCAGGCTGGGCTC.........................................................................................................................251.000.001.00--------------------------------------------------
.................................ATGCATGTAGAAAATAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00---------------------1.00-----------------------------
.........................................................................................................................................................................................................................................................................................................................................................................TTGCCATGCTGGCCAGGCTGGGCC..........................................................................................................................241.000.001.00--------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................AGGGTTTTGCCATGCTGGCCAGGCTGGCCTC.........................................................................................................................311.000.00-1.00-------------------------------------------------
......................................................................................................................................................................................................CTCTGTCACCAAGGCTGGAGTTCAGTA..........................................................................................................................................................................................................................................................................................271.000.00-------------------------------------------1.00-------
.................................................................................................................................................................................................................................................................................................................................................TGTATTTTTAGTAGAGGCAGGGATGC................................................................................................................................................261.000.001.00--------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................TGCCATGCTGGCCAGGCTGGTGTG.........................................................................................................................241.000.001.00--------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TGCTGGCCAGGCTGGTCCCAG.......................................................................................................................211.000.00-1.00-------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................TTAGTAGAGGCAGGGTTTGATC.............................................................................................................................................221.000.00--------1.00------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................TTTTTAGTAGAGGCAGGGGTCC................................................................................................................................................221.000.001.00--------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................ATGCTGGCCAGGCTGGGGT..........................................................................................................................191.000.001.00--------------------------------------------------
.....................................................................................................................................................................ACATCTTTTCTTTTTTTAGC..................................................................................................................................................................................................................................................................................................................................201.000.001.00--------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................TTTGCCATGCTGGCCAGGCTGGGTT..........................................................................................................................251.000.001.00--------------------------------------------------
.......................................................................................................................................................................ATCTTTTCTTTTTTTTTGAGACGGT...........................................................................................................................................................................................................................................................................................................................251.000.001.00--------------------------------------------------
.....................................................................................................................................................................ACATCTTTTCTTTTTTTTTCTC................................................................................................................................................................................................................................................................................................................................221.000.00--1.00------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................ATGCTGGCCAGGCTGGGG...........................................................................................................................181.000.001.00--------------------------------------------------
......................................TGTAGAAAATAGGTAACTACGTCTTTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001.00--------------1.00------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................TTTTGCCATGCTGGCCAGGCTGGGA...........................................................................................................................251.000.00-1.00-------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGAACCACAAAAAGCA................191.000.00--------1.00------------------------------------------
....................................................................................................................................................................AACATCTTTTCTTTTTTTTTTTG................................................................................................................................................................................................................................................................................................................................231.000.00--1.00------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................ATGCTGGCCAGGCTGGTCGACC.......................................................................................................................221.000.00-1.00-------------------------------------------------
...........................................................................................................................................................................................................................................AGCTCACTGCAACCTCCACCTCCCATGTC...................................................................................................................................................................................................................................................291.000.001.00--------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................TATTTTTAGTAGAGGCAGGGTTTTACCT............................................................................................................................................281.000.00------1.00--------------------------------------------
....................................................................................................................................................................AACATCTTTTCTTTTTTTTAGTT................................................................................................................................................................................................................................................................................................................................231.000.00------1.00--------------------------------------------
................................................................................................................................................................................................................AAGGCTGGAGTTCAGTGGAG.......................................................................................................................................................................................................................................................................................2011.001.00--------------------------------------------1.00------
......................................................................................................................................................................CATCTTTTCTTTTTTTTTCCTC...............................................................................................................................................................................................................................................................................................................................221.000.00--1.00------------------------------------------------
......................................................................................................................................................................CATCTTTTCTTTTTTTTCG..................................................................................................................................................................................................................................................................................................................................191.000.00---1.00-----------------------------------------------
.......................................................................................................................................................................ATCTTTTCTTTTTTTTTGAGGGC.............................................................................................................................................................................................................................................................................................................................231.000.001.00--------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................GTAGAGGCAGGGTTTTAAC.............................................................................................................................................191.000.00-------1.00-------------------------------------------
.................................................................................................................................................................................................................AGGCTGGAGTTCAGTGATT.......................................................................................................................................................................................................................................................................................191.000.00-----------1.00---------------------------------------
.....................................................................................................................................................................ACATCTTTTCTTTTTTTTCTTG................................................................................................................................................................................................................................................................................................................................221.000.00--1.00------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................TTGCCATGCTGGCCAGGCTTGCC...........................................................................................................................231.000.001.00--------------------------------------------------
............................GTGTTATGCATGTAGAAAATAGGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00----------------------1.00----------------------------
.....................................ATGTAGAAAATAGGTAACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00--------1.00------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................TTAGTAGAGGCAGGGTT..................................................................................................................................................1701.001.00-------------------------------------1.00-------------
....................................................................................................................................................................................................................................................................................................................................................ATTTTTAGTAGAGGCAGGGGCTC................................................................................................................................................231.000.001.00--------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................GAGGCAGGGTTTTGCGGCA..........................................................................................................................................191.000.00-----------1.00---------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................TGCCATGCTGGCCAGGCTGGTCTTTAGC.....................................................................................................................281.000.001.00--------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................TTGCCATGCTGGCCAGGCTGGGTCT.........................................................................................................................251.000.00-1.00-------------------------------------------------
................................TATGCATGTAGAAAATAGGTAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00----------------------------1.00----------------------
................................................................................................................................................................................................................................................................................TCTCCTGCCTCATCCTCCCAAGTAGCCGTC.............................................................................................................................................................................................................301.000.00-1.00-------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................TTTGCCATGCTGGCCAGGCTGGGGT..........................................................................................................................251.000.00-1.00-------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................TTGTATTTTTAGTAGAGGCAGGGGAAG................................................................................................................................................271.000.00---------------------1.00-----------------------------
....................................................................................................................................................................................................................................................................................................................................................ATTTTTAGTAGAGGCAGGGTTCCCC..............................................................................................................................................251.000.00-1.00-------------------------------------------------
..............................................................................................................................................................................................................................................................CTCCCAGGTTCAAGCGATTCTCCTGAAA.................................................................................................................................................................................................................................281.000.00---------------------------1.00-----------------------
........................................................................................................................................................................................................................................................................................................................................................................TTTGCCATGCTGGCCAGGCTGGTCCGG........................................................................................................................271.000.00-1.00-------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................CCCTGCTAATTTTTGTATTTTTAGGT.............................................................................................................................................................261.000.00----------1.00----------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TGCTGGCCAGGCTGGTGTCT........................................................................................................................201.000.001.00--------------------------------------------------
............................................................................................................................................................................................................................................................ACCTCCCAGGTTCAAGCGATTCTCCTCAGG.................................................................................................................................................................................................................................301.000.00----------1.00----------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................TTTGCCATGCTGGCCAGGCTGGCTTG.........................................................................................................................261.000.00-1.00-------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................TATTTTTAGTAGAGGCAGGGGCT.................................................................................................................................................231.000.001.00--------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................ATTTTTGTATTTTTAGTAGAGGCAGGGGCTC................................................................................................................................................311.000.001.00--------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................ATGCTGGCCAGGCTGGTCCGG........................................................................................................................211.000.00-1.00-------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................TTTGTATTTTTAGTAGAGGCA.......................................................................................................................................................2101.001.00----------------------------------------1.00----------
.......................................................................................................................................................................................................................................................................................................................................................TTTAGTAGAGGCAGGGAAAT................................................................................................................................................201.000.00-------1.00-------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................TTTGTATTTTTAGTAGAGGCAGGGGCTC................................................................................................................................................281.000.00-1.00-------------------------------------------------
.....................................................................................................................................................................ACATCTTTTCTTTTTTTTTCTTG...............................................................................................................................................................................................................................................................................................................................231.000.00---1.00-----------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................TTTTGTATTTTTAGTAGAGGCAGAC....................................................................................................................................................251.000.00-----------------------------------------------1.00---
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGCAACTGAAGAACCCTG.......................221.000.00-----------------------1.00---------------------------
...........................................................................................................................................................................................................................................AGCTCACTGCAACCTCCACCTGGGC.......................................................................................................................................................................................................................................................251.000.00-1.00-------------------------------------------------
..........................................................................................................................................................................................................................................CAGCTCACTGCAACCTCCACCTCCCAGGAGC..................................................................................................................................................................................................................................................311.000.00-1.00-------------------------------------------------
..............................................................................................................................................................................................................................................................................................................ATTACAGGTGCATGCTGCCTCGC......................................................................................................................................................................................231.000.001.00--------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATGGCCTGGAGCGA....................................171.000.00------------------1.00--------------------------------
.......................................................................................................................................................................................................................................................................................................................................................TTTAGTAGAGGCAGGGGC..................................................................................................................................................181.000.001.00--------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................TTGCCATGCTGGCCAGGCTGGAACC.........................................................................................................................251.000.001.00--------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................TTGCCATGCTGGCCAGGCTGGTCCCG........................................................................................................................261.000.00-1.00-------------------------------------------------
......................................................................................................................................................................CATCTTTTCTTTTTTTTAAAG................................................................................................................................................................................................................................................................................................................................211.000.00--1.00------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................GTATTTTTAGTAGAGGCAGGGGCTC................................................................................................................................................251.000.001.00--------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................GTAGAGGCAGGGTTTTACG.............................................................................................................................................191.000.00-------1.00-------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................TTTGCCATGCTGGCCAGGCTGAAA...........................................................................................................................241.000.001.00--------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................TGCCATGCTGGCCAGGCTGGGG...........................................................................................................................221.000.001.00--------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................TTTGCCATGCTGGCCAGGGTAG.............................................................................................................................221.000.001.00--------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................TTTTGTATTTTTAGTAGAGGCAGGGGC..................................................................................................................................................271.000.001.00--------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................ATGCTGGCCAGGCTGGCCCG.........................................................................................................................201.000.001.00--------------------------------------------------
........................................................................................................................................................................................................................................................................................CTCATCCTCCCAAGTAGCTCTG.............................................................................................................................................................................................................221.000.00------------------------------------1.00--------------
............................................................................................................................................................................................................................................................................................................................................................................................................TCAGGCCTCTGAGCCCAAAG...........................................................................................201.000.00-----------------------------1.00---------------------
..............................................................................................................................................................................................................................................................................................................................................................................ATGCTGGCCAGGCTGGTGGTC........................................................................................................................211.000.00-1.00-------------------------------------------------
......................................................................................................................................................................CATCTTTTCTTTTTTTTAG..................................................................................................................................................................................................................................................................................................................................191.000.00----1.00----------------------------------------------
.....................................................................................................................................................................ACATCTTTTCTTTTTTTTTTGGG...............................................................................................................................................................................................................................................................................................................................231.000.00-----1.00---------------------------------------------
.............................................................................................................................TTTTTAAAAATAATTTCTAG..........................................................................................................................................................................................................................................................................................................................................................................2020.500.50-------------------------------------------------0.50-
..........................................................................................................................................................................................................................................................................................................................TGCTGCCACACCCTGCTAATT............................................................................................................................................................................2150.200.20------0.20--------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCAACTGAAGAACCACAAAAGAAG................2860.170.17--------------0.17------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTGAAGAACCACAAAAGAAGTGAAAC..........2970.140.14--------------0.14------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCAACTGAAGAACCACAAAAGAA.................2770.140.14--------------------------------------------------0.14
...................................................................................................................................................................AAACATCTTTTCTTTTTT......................................................................................................................................................................................................................................................................................................................................1890.110.11------0.11--------------------------------------------

Antisense strand
CAGGGCGGCCATAGGGGAAGGAGCCAATGTGTTATGCATGTAGAAAATAGGTAACTACGTCTTTTGCTCTGTTACTATTTCAACATTTGATGTAAAAAACATTTTCTATGCAGCTAAAGGAATTGTTTTTAAAAATAATTTCTAGGTTTTCTGCCTTGCTTTAAAACATCTTTTCTTTTTTTTTGAGACAAAATCTCACTCTGTCACCAAGGCTGGAGTTCAGTGGAGCCATCTCAGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCGATTCTCCTGCCTCATCCTCCCAAGTAGCTGGAATTACAGGTGCATGCTGCCACACCCTGCTAATTTTTGTATTTTTAGTAGAGGCAGGGTTTTGCCATGCTGGCCAGGCTGGTCTTGAACTACTTGTCAGGCCTCTGAGCCCAAGTTAAATCATCATAAACCCTGTCACCTGCACGTATACATCCAGATGGCCTGGAGCAACTGAAGAACCACAAAAGAAGTGAAACAGCCAGTTCC
..................................................(((((...((.....))...)))))........(((..(((((.....)))))....))).((((..(((((((((((....))))))))))).)))).......................................................................................................................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150...................................................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189782SRR037938(GSM510476)
293Red. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR189784SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
TAX577743(Rovira)
total RNA. (breast)
SRR029125(GSM416754)
U2OS. (cell line)
SRR189785SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
.....................................................................................................................................AATAATTTCTAGGTTTTGA................................................................................................................................................................................................................................................................................................................................................................... 193.000.00---------3.00-----------------------------------------
...................................................................................CATTTGATGTAAAAACAAG..................................................................................................................................................................................................................................................................................................................................................................................................................... 192.000.00---------------2.00-----------------------------------
.................................................................................................................................................................................................................................................CTGCAACCTCCACCTCCCAGGTTCAAGGAGG........................................................................................................................................................................................................................................... 312.000.00-2.00-------------------------------------------------
...................................................................................................................................................................................................................................................................AGGTTCAAGCGATTCTCTGGA................................................................................................................................................................................................................................... 212.000.00-------------------2.00-------------------------------
...................................GCATGTAGAAAATAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 161.000.00---1.00-----------------------------------------------
...................................................................................................................................................................................................................................................................AGGTTCAAGCGATTCTCCTTTT.................................................................................................................................................................................................................................. 221.000.00-----------------1.00---------------------------------
...............................................................................................................................................................................................................................................CACTGCAACCTCCACCTCCCAGGGGGG................................................................................................................................................................................................................................................. 271.000.00----------------------------------1.00----------------
................................................................................................................................................................................................................................................................................................................................................................................GCTGGCCAGGCTGGTCTTGAACTGCGG................................................................................................................ 271.000.00-1.00-------------------------------------------------
......................................................................................................................................................................................................................................................ACCTCCACCTCCCAGGATG.................................................................................................................................................................................................................................................. 191.000.00-----------------1.00---------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TGCTGGCCAGGCTGGTCTTAT....................................................................................................................... 211.000.00------------------------------------------------1.00--
...............................................................................................................................................................................................................................................................................TTCTCCTGCCTCATCCTCCCAAGTATGC................................................................................................................................................................................................................ 281.000.001.00--------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................TGCTGGCCAGGCTGGTCTTGAGGCG................................................................................................................... 251.000.001.00--------------------------------------------------
.................................................................................................................................................................................................................................................................................CTCCTGCCTCATCCTCTACC...................................................................................................................................................................................................................... 201.000.00-------------------------------1.00-------------------
...............................................................................................................................................................................................................................................................................................................................................................................TGCTGGCCAGGCTGGTCTTGGCG..................................................................................................................... 231.000.00-1.00-------------------------------------------------
...............................................................................................................................................................................................................................................................................GGGAGGATGAGGCAGGAGAA........................................................................................................................................................................................................................ 2001.001.00-------------1.00-------------------------------------
.......................................................................................................................................................................................................................GAGTTCAGTGGAGCCTG................................................................................................................................................................................................................................................................................... 171.000.00---------------------------------------------1.00-----
......................................................................................................................................................................................................................................ATCTCAGCTCACTGCAACCTCCACCAAA......................................................................................................................................................................................................................................................... 281.000.00---------------------------------------1.00-----------
................................................................................................................................................................................................................................................................................................................................................................................GCTGGCCAGGCTGGTCTTGAAGTGC.................................................................................................................. 251.000.00-1.00-------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................GCTGGCCAGGCTGGTCTTGAGG..................................................................................................................... 221.000.00-1.00-------------------------------------------------
................................................................................................................................................................................................................AAGGCTGGAGTTCAGTTTCA....................................................................................................................................................................................................................................................................................... 201.000.00------------------1.00--------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACGTATACATCCAGAAAA.............................................. 211.000.00--------------1.00------------------------------------
.............................................................................................................................................................................................................................................................CCTCCCAGGTTCAAGCGATTCTCCTA.................................................................................................................................................................................................................................... 261.000.00--------------------------1.00------------------------
...............................................................................................................................................................................................................................................CACTGCAACCTCCACCTCCCAGGTTCATAG.............................................................................................................................................................................................................................................. 301.000.00--------------------------------1.00------------------
..........................................................................................................................................................................................................................................................CCACCTCCCAGGTTCAAGCGATTCTGG...................................................................................................................................................................................................................................... 271.000.001.00--------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................GGCCAGGCTGGTCTTGAACTAGC................................................................................................................. 231.000.001.00--------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................CATGCTGGCCAGGCTGGTATG......................................................................................................................... 211.000.00-------------1.00-------------------------------------
................................................................................................................................................................................................................................................................................TTGGGAGGATGAGGCAGGAGA...................................................................................................................................................................................................................... 2101.001.00-------------1.00-------------------------------------
............................................................................................................................................................................................................................................................................CGATTCTCCTGCCTCATCCTCCCAGC..................................................................................................................................................................................................................... 261.000.001.00--------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................GCTGGCCAGGCTGGTCTTGAAGGC................................................................................................................... 241.000.00-1.00-------------------------------------------------
................................................................................................................................................................................................................................................................................................CCCAAGTAGCTGGAATGTC........................................................................................................................................................................................................ 191.000.00------------------------------------------1.00--------
............................................................................................................................................................................................................................................................ACCTCCCAGGTTCAAGCGATTCCTGC..................................................................................................................................................................................................................................... 261.000.00-------------------------1.00-------------------------
................................................................................................................................................................................................................................................................................TCTCCTGCCTCATCCTCCCAAGTCAC................................................................................................................................................................................................................. 261.000.001.00--------------------------------------------------
..........................................................................................................................................................................................................................................................................................CATCCTCCCAAGTAGCTGGTGCA.......................................................................................................................................................................................................... 231.000.00----------1.00----------------------------------------
...........................................................................................................................................................................................................................................................................GCGATTCTCCTGCCTCATCCTCAA........................................................................................................................................................................................................................ 241.000.00------------------------1.00--------------------------
.....................................................................................................................................AATAATTTCTAGGTTTTGAT.................................................................................................................................................................................................................................................................................................................................................................. 201.000.00--------------------------------------1.00------------
...............................................................................................................................................................................................................................................................................TTCTCCTGCCTCATCCTCCCAACCTC.................................................................................................................................................................................................................. 261.000.00-1.00-------------------------------------------------
............................................................................................................................................................................................................................................................ACCTCCCAGGTTCAAGCGATTCTCCCTG................................................................................................................................................................................................................................... 281.000.00-----------------------------------------1.00---------