ID: uc002mki.6
GENE: ADAMTS10(6)
chr19:8651556-8651749-


(1)
AGO1.ip
(2)
B-CELL
(9)
BRAIN
(3)
BREAST
(6)
CELL-LINE
(1)
CERVIX
(3)
HEART
(4)
LIVER
(1)
OTHER
(1)
RRP40.ip
(31)
SKIN
(3)
UTERUS
(1)
XRN.ip

Sense strand
CTCCGTCCACATCTTCATCCAGGATCTGAACCTCTCTCTCAGTCACTTGGGTGAGCAGATGGTGGGGAGGGGATGAGGATTAGGGGTCAGTGGGGAGGGCGGTTTCAGCATGACTAGAATTCTGAACCCTGCATCGTCCCCCAGCCCTGAAGGGAGACCAGGAGTCCCTGCTGCTGGAGGGGCTGCCTGGGACC
...........................................................................................(((((((((((.(((((.((.......)).))))).)).)).)).))))).....................................................
....................................................................................85.........................................................144................................................
SizePerfect hitTotal NormPerfect NormGSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189782SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR189787SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR040025(GSM532910)
G613T. (cervix)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
.........................................................................................................................CTGAACCCTGCATCGTCCCCCAGT.................................................24131.0010.002.00-1.003.004.002.00--1.001.00--1.00---1.00-1.001.001.001.00-1.001.00-----1.00--1.00---1.00-1.00----1.00----1.00---1.00--1.00---1.00-----
.........................................................................................................................CTGAACCCTGCATCGTCCCCCAG..................................................23110.0010.00---1.00-1.00---------1.00----------------1.00-1.00-1.00---1.00----------1.00-----1.00-1.00------
.........................................................................................................................CTGAACCCTGCATCGTCCCCCA...................................................2219.009.00-------1.001.00-1.00-1.00-1.00-------------------------------------1.00--1.00--1.00---1.00---
.........................................................................................................................CTGAACCCTGCATCGTCCCCC....................................................2116.006.00-3.00-----2.00--1.00-------------------------------------------------------
.........................................................................................................................CTGAACCCTGCATCGTCCCCCAGA.................................................2413.0010.00-----------------------------1.00-----------------1.001.00-----------------
.........................................................................................GTGGGGAGGGCGGTTTCAGC.....................................................................................2012.002.00------2.00-----------------------------------------------------------
................................................................................................................ACTAGAATTCTGAACTCTG...............................................................192.000.00-------------------------1.00--------------------1.00-------------------
.........................................................................................................................CTGAACCCTGCATCGTCCC......................................................1912.002.00--1.00-----------------------1.00---------------------------------------
..........................................................................................................................TGAACCCTGCATCGTCCCCCAGT.................................................232.000.00-------------1.00--1.00-------------------------------------------------
..........................................................................................................................TGAACCCTGCATCGTCCCC.....................................................1911.001.00---------------------------1.00--------------------------------------
.........................................................................................................................CTGAACCCTGCATCGTCCCCCAGTT................................................2511.0010.001.00-----------------------------------------------------------------
...............................................TGGGTGAGCAGATGGACC.................................................................................................................................181.000.00-----------------------------------------1.00------------------------
.......................................................................................................................TTCTGAACCCTGCATCGTCCCCCATA.................................................261.000.00---------------1.00--------------------------------------------------
..........................................................................................TGGGGAGGGCGGTTTCAGCAT...................................................................................2111.001.00-------------------------------------------1.00----------------------
.........................................................................................GTGGGGAGGGCGGTTTCTA......................................................................................191.000.00-----------------------------------1.00------------------------------
........................................................................................AGTGGGGAGGGCGGTTTCAGTTA...................................................................................231.000.00----------------------1.00-------------------------------------------
.........................................................................................................................CTGAACCCTGCATCGTCCCC.....................................................2011.001.00--1.00---------------------------------------------------------------
...............CATCCAGGATCTGAAAAAA................................................................................................................................................................191.000.00-------------------------------1.00----------------------------------
.......................................................................................CAGTGGGGAGGGCGGTTTT........................................................................................191.000.00-------------1.00----------------------------------------------------
...............................................TGGGTGAGCAGATGGTGAGGA..............................................................................................................................211.000.00--------1.00---------------------------------------------------------
........................................................................................................................................................................TGCTGCTGGAGGGGCTGGTG......201.000.00-----------1.00------------------------------------------------------
.........................................................................................................................CTGAACCCTGCATCGTCCCCCT...................................................2211.006.00--------------1.00---------------------------------------------------
.........................................................................................GTGGGGAGGGCGGTTAA........................................................................................171.000.00------------------------------------------1.00-----------------------
.........................................................................................................................CTGAACCCTGCATCGTCCCCCAT..................................................2311.009.00--1.00---------------------------------------------------------------
........................................................................................................................TCTGAACCCTGCATCGTCCCCCAG..................................................2411.001.00------1.00-----------------------------------------------------------
.........................................................................................................................CTGAACCCTGCATCGTCCCCCAC..................................................2311.009.00-----------1.00------------------------------------------------------
.........................................................................................................................CTGAACCCTGCATCGTCCCCCAAT.................................................2411.009.001.00-----------------------------------------------------------------
..............................................................TGGGGAGGGGATGAGTTG..................................................................................................................181.000.00----------------------------1.00-------------------------------------
.........................................................................................................................CTGAACCCTGCATCGTCCCA.....................................................2011.002.00-1.00----------------------------------------------------------------
.........................................................................................................................CTGAACCCTGCATCGTCCCTTAG..................................................2311.002.00-----------------1.00------------------------------------------------
............................................................................................................CATGACTAGAATTCTG......................................................................1650.400.40------------------0.20---------------------------------------------0.20-
......................................................................................................TTTCAGCATGACTAGA............................................................................1630.330.33---------------------------------------------------------------0.33--
..................................................................................................................................................................................GGGGCTGCCTGGGACC1660.170.17-----------------------------------------------------------------0.17

Antisense strand
CTCCGTCCACATCTTCATCCAGGATCTGAACCTCTCTCTCAGTCACTTGGGTGAGCAGATGGTGGGGAGGGGATGAGGATTAGGGGTCAGTGGGGAGGGCGGTTTCAGCATGACTAGAATTCTGAACCCTGCATCGTCCCCCAGCCCTGAAGGGAGACCAGGAGTCCCTGCTGCTGGAGGGGCTGCCTGGGACC
...........................................................................................(((((((((((.(((((.((.......)).))))).)).)).)).))))).....................................................
....................................................................................85.........................................................144................................................
SizePerfect hitTotal NormPerfect NormGSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189782SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR189787SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR040025(GSM532910)
G613T. (cervix)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
.................TCCAGGATCTGAACCCGAG.............................................................................................................................................................. 194.000.00-----------------1.00--------------------1.00------1.00---------------1.00----
.................TCCAGGATCTGAACCAGAG.............................................................................................................................................................. 191.000.00--------------------------------------------------1.00---------------
..................................................................................................................................................................AGTCCCTGCTGCTGGGCGC............. 191.000.00------------------------------------------------------1.00-----------
.CTGGATGAAGATGTGGACGGA............................................................................................................................................................................ 2111.001.00---------1.00--------------------------------------------------------