ID: uc002mfb.2_intron_7_0_chr19_6471508_r.3p
GENE: (4)
chr19:6471458-6471707-


(1)
BRAIN 		(2)
BREAST 		(21)
CELL-LINE 		(2)
CERVIX 		(2)
HEART 		(3)
LIVER 		(3)
OTHER 		(21)
SKIN

Sense strand
CACTCCAGCCTGGGTGCCAGAGCAACTCCATCTCAAAAAATAAAAATAAAAAATAAAGTGGGCTCCAGTTTCCCAGGTGCTTGGGGGTGGGCAGGTTGGAGGCCAGAGATGGCTTCTACATCTTGACAGCAGGCAGGCTTCGAAGTGCTGGCATTCAGATGTGTCTCCTGCTGTTTCTGATTTACTGTCCCCCACCCCAGTTCATCGAAGCCCGGCTGGAGAAGCTCAACAAGGGGGAGGGCTTCTCAGA
.........................................................((..((((((..(((((((....)))))))))).((((.(((((((((....)))))))))...))))..)))..))....................................................................................................................
.........................................................58................................................................................140............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR189784SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		TAX577741(Rovira)
total RNA. (breast)		SRR040039(GSM532924)
G531T. (cervix)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040012(GSM532897)
G648N. (cervix)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR038858(GSM458541)
MEL202. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR038853(GSM458536)
MELB. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR343335SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR343336SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038861(GSM458544)
MM466. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR038856(GSM458539)
D11. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
......................................................................................................................CATCTTGACAGCAGGACG..................................................................................................................1813.000.00--6.00-----3.00---1.00---1.00--1.00------1.00----------------------------
....................................................................................................................TACATCTTGACAGCAGGACG..................................................................................................................20213.004.50-2.003.50---1.50-0.50-----1.001.50---------------0.50-0.500.500.500.50--0.50---------------
....................................................................................................................TACATCTTGACAGCAG......................................................................................................................1639.009.00-3.00----0.67---1.33-1.33---0.33-0.33-----------0.33-0.67---------0.330.330.33----------
....................................................................................................................TACATCTTGACAGCAGG.....................................................................................................................1724.504.50-1.50----1.00---0.50----------1.00--------0.50------------------------
....................................................................................................................TACATCTTGACAGCAGGACGG.................................................................................................................2123.004.500.501.00----0.50------------------------------0.500.50----------------
.....................................................................................................................ACATCTTGACAGCAGG.....................................................................................................................1652.802.80-1.00----0.40---0.20-0.20----------------------------0.40---0.200.20---0.20----
.....................................................................................................................ACATCTTGACAGCAGGACG..................................................................................................................1952.602.80-0.800.60---0.20------------------------0.20-----------------0.20-0.200.200.20-
..............................................................CTCCAGTTTCCCAGGAAT..........................................................................................................................................................................182.000.00-------------------------1.00-1.00---------------------------
........................ACTCCATCTCAAAAAATAACG.............................................................................................................................................................................................................212.000.00---------2.00---------------------------------------------
......................................................................................................................CATCTTGACAGCAGGACGG.................................................................................................................192.000.00--------------1.00---1.00------------------------------------
....................................................................................................................TACATCTTGACAGCAGATC...................................................................................................................1931.339.00-----------------1.33-------------------------------------
............................................................................................................................................................................................................TCGAAGCCCGGCTGGAGAAGCTC.......................2311.001.00-----------------------------1.00-------------------------
....................................................................................................................TACATCTTGACAGCAGGAC...................................................................................................................1921.004.50-0.50--------------------------------------0.50--------------
........CCTGGGTGCCAGAGCGGG................................................................................................................................................................................................................................181.000.00----------------------------1.00--------------------------
.....................................................................................................................ACATCTTGACAGCAGGACGG.................................................................................................................2051.002.80-0.20----0.20-----0.20----------------------------------0.200.20------
....................................................................................GGGTGGGCAGGTTGGATTT...................................................................................................................................................191.000.00----------------------1.00--------------------------------
........................ACTCCATCTCAAAAAATAAACAAG..........................................................................................................................................................................................................241.000.00----1.00--------------------------------------------------
.....................................................................................................................ACATCTTGACAGCAGGA....................................................................................................................1750.402.80-0.40-----------------------------------------------------
................................................................................................................................................................................................................AGCCCGGCTGGAGAA...........................1550.200.20---------0.20---------------------------------------------
..............................................................................................................................................................................................CCCACCCCAGTTCATC............................................1680.120.12------------------------------------------------------0.12

Antisense strand
CACTCCAGCCTGGGTGCCAGAGCAACTCCATCTCAAAAAATAAAAATAAAAAATAAAGTGGGCTCCAGTTTCCCAGGTGCTTGGGGGTGGGCAGGTTGGAGGCCAGAGATGGCTTCTACATCTTGACAGCAGGCAGGCTTCGAAGTGCTGGCATTCAGATGTGTCTCCTGCTGTTTCTGATTTACTGTCCCCCACCCCAGTTCATCGAAGCCCGGCTGGAGAAGCTCAACAAGGGGGAGGGCTTCTCAGA
.........................................................((..((((((..(((((((....)))))))))).((((.(((((((((....)))))))))...))))..)))..))....................................................................................................................
.........................................................58................................................................................140............................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR189784SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		TAX577741(Rovira)
total RNA. (breast)		SRR040039(GSM532924)
G531T. (cervix)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040012(GSM532897)
G648N. (cervix)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR038858(GSM458541)
MEL202. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR038853(GSM458536)
MELB. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR343335SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR343336SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038861(GSM458544)
MM466. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR038856(GSM458539)
D11. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
.....................................AAATAAAAATAAAAAATAAAGTACT............................................................................................................................................................................................ 256.000.00-----5.00-1.00-----------------------------------------------
..................................AAAAAATAAAAATAAAAAATCTGC................................................................................................................................................................................................ 246.000.006.00------------------------------------------------------
...................................AAAAATAAAAATAAAAAATAAAGTGGGATG......................................................................................................................................................................................... 302.500.00----2.00--------0.50-----------------------------------------
..................................AAAAAATAAAAATAAAAAATAAACGGG............................................................................................................................................................................................. 272.000.002.00------------------------------------------------------
.........................................AAAAATAAAAAATAAAGTCTTG........................................................................................................................................................................................... 222.000.00---1.00---------1.00-----------------------------------------
...........................CCATCTCAAAAAATAAAAATGGCC....................................................................................................................................................................................................... 242.000.002.00------------------------------------------------------
...................................AAAAATAAAAATAAAAAATAAAGTGGAG........................................................................................................................................................................................... 282.000.00---2.00---------------------------------------------------
.................................CAAAAAATAAAAATAAAAAATCGGG................................................................................................................................................................................................ 251.000.00---1.00---------------------------------------------------
..................................AAAAAATAAAAATAAAAAATAAAGTTTTG........................................................................................................................................................................................... 291.000.00-----------1.00-------------------------------------------
.............................................ATAAAAAATAAAGTGATCC.......................................................................................................................................................................................... 191.000.00-------1.00-----------------------------------------------
...................................AAAAATAAAAATAAAAAATAAAGTCTG............................................................................................................................................................................................ 271.000.00---1.00---------------------------------------------------
...................................AAAAATAAAAATAAAAAATAAAGTAA............................................................................................................................................................................................. 261.000.00----1.00--------------------------------------------------
...................................AAAAATAAAAATAAAAAATAAAGTGGG............................................................................................................................................................................................ 271.000.00-----------1.00-------------------------------------------
..................................AAAAAATAAAAATAAAAAATCAGG................................................................................................................................................................................................ 241.000.00----1.00--------------------------------------------------
.......................................................................................................................CTGCCTGCTGTCAAGAT.................................................................................................................. 1711.001.00----------1.00--------------------------------------------
........................................TAAAAATAAAAAATAAAGTGCCG........................................................................................................................................................................................... 231.000.001.00------------------------------------------------------
............................................................................GTGCTTGGGGGTGGGCAAGC.......................................................................................................................................................... 201.000.00------------------------1.00------------------------------
..................................AAAAAATAAAAATAAAAAATAACGGG.............................................................................................................................................................................................. 261.000.00---1.00---------------------------------------------------
.......................................ATAAAAATAAAAAATAAAGTCTTG........................................................................................................................................................................................... 241.000.00---------1.00---------------------------------------------
.........................................................................................................................................................................................................TCATCGAAGCCCGGCGGGG.............................. 191.000.00-----------------------1.00-------------------------------
..TCTGGCACCCAGGCTGGAG..................................................................................................................................................................................................................................... 1901.001.00--------------------1.00----------------------------------
...........................................AAATAAAAAATAAAGTGGAAAG......................................................................................................................................................................................... 221.000.00-------1.00-----------------------------------------------
..................................AAAAAATAAAAATAAAAAATAACTCG.............................................................................................................................................................................................. 261.000.00-----------1.00-------------------------------------------
......................................AATAAAAATAAAAAATAAAGTCTG............................................................................................................................................................................................ 241.000.00----1.00--------------------------------------------------
..CTCCAGCCTGGGTGCCAGAGCAACGC.............................................................................................................................................................................................................................. 261.000.00---1.00---------------------------------------------------
....CCAGCCTGGGTGCCAGAGCAAGGC.............................................................................................................................................................................................................................. 241.000.001.00------------------------------------------------------
...............................................AAAAAATAAAGTGGGTATA........................................................................................................................................................................................ 191.000.00-------1.00-----------------------------------------------
...............................................AAAAAATAAAGTGGGTTTG........................................................................................................................................................................................ 191.000.00-------------1.00-----------------------------------------
...................................CCCACTTTATTTTTTATTTTTATTTTT............................................................................................................................................................................................ 2720.500.50---0.50---------------------------------------------------
...........................................................TGGGAAACTGGAGCCC............................................................................................................................................................................... 1680.120.12----------0.12--------------------------------------------