ID: uc002mdv.2_intron_1_0_chr19_5917992_r.3p
GENE: (10)
chr19:5917942-5918191-


(1)
AGO2.ip 		(5)
B-CELL 		(4)
BRAIN 		(10)
BREAST 		(15)
CELL-LINE 		(3)
CERVIX 		(1)
FIBROBLAST 		(4)
HEART 		(11)
LIVER 		(3)
OTHER 		(11)
SKIN 		(4)
UTERUS 		(1)
XRN.ip

Sense strand
GACCTCTGGGATATTCCCAGCCACCTGGGAGTGGTGGCATCCTTTCGGGGAGAGGCCGGCAGGCCCAGGGCCAATGGCCTCCCCACAAGGCCTTGTGGCAGTGTCACCTCTGAACCTTGGGACTTGGCACTTGTGTTCTGCAGAAGGCAGGAGGGGGTAGGACTGGGGTCCGGGGGTCTCATACCCTCCTCCCTTCCCAGGCCAGCTCCAAGGACACAGGTCAGTTGTATGCAGCCCTGCACCACCGCAT
.........................................................................................................................................(((..(((((.(((((((....((((....)))).((....))...))))))).))))).)))..................................................
.....................................................................................................................................134...............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189782SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577740(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577743(Rovira)
total RNA. (breast)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR029127(GSM416756)
A549. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577744(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR040036(GSM532921)
G243N. (cervix)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577739(Rovira)
total RNA. (breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR029130(GSM416759)
DLD2. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR191528(GSM715638)
130genomic small RNA (size selected RNA from . (breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR040030(GSM532915)
G013N. (cervix)		TAX577580(Rovira)
total RNA. (breast)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040029(GSM532914)
G026T. (cervix)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189783SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR189786SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
..................................................................................................................................................................................TCATACCCTCCTCCCTTCCCAG..................................................22113.0013.00---4.00--------4.00-------1.00-----------1.00-----------1.00---------------------1.00---1.00----
...................................................................................................................................................................................CATACCCTCCTCCCTTCCCAGT.................................................2213.001.00---1.00-------------------------------------1.00--------------------------1.00------
..................................................................................................................................................................................TCATACCCTCCTCCCTTCCCA...................................................2113.003.00---------------------------------------------------1.00--------1.00----------1.00---
..........................................................................................................................................TGCAGAAGGCAGGAGGGGGTAGGA........................................................................................2413.003.00------------------1.00--------2.00-----------------------------------------------
...........................................................................................................................................................................................................AGCTCCAAGGACACAGGTCAG..........................2113.003.00----------3.00----------------------------------------------------------------
.........................................................................................................................................CTGCAGAAGGCAGGAGGGGGTAGG.........................................................................................2412.002.00----------------2.00----------------------------------------------------------
........................................................................................................................................TCTGCAGAAGGCAGGAGGGGGTAGT.........................................................................................2512.002.00------------------------------2.00--------------------------------------------
............................................................................................................................................CAGAAGGCAGGAGGGGGTAGG.........................................................................................2112.002.00-----------1.00---------------------------------------------------------1.00-----
....................................................................................................GTGTCACCTCTGAACTCTG...................................................................................................................................192.000.00-------------------2.00-------------------------------------------------------
...........................................................................................................................................................................................................AGCTCCAAGGACACAGGTCAGTTGTAT....................2712.002.00----------------------------2.00----------------------------------------------
........................................................................................................................................TCTGCAGAAGGCAGGAGGGGGTAG..........................................................................................2412.002.00------------------1.00---------------------------1.00----------------------------
.........................................................................................................................................................................................................................AGGTCAGTTGTATGCAGC...............1811.001.00--------------------------------------------------------1.00------------------
...............................................................................................................................................AAGGCAGGAGGGGGTGGGT........................................................................................191.000.00---------------------------------------------------------1.00-----------------
.................................................................................................................................................................................CTCATACCCTCCTCCCTTCCCAG..................................................2311.001.00-------------------------------------------------------1.00-------------------
...................................................................................................................................................CAGGAGGGGGTAGGACTCTG...................................................................................201.000.00---------------------------------------------------------------1.00-----------
........................................................................................................................................TCTGCAGAAGGCAGGAGGGG..............................................................................................2011.001.00--------------------------------------------------1.00------------------------
.......................................TCCTTTCGGGGAGAGAAC.................................................................................................................................................................................................181.000.00-------------------------------------------------------------1.00-------------
...............................................................................................................................................................................................................CCAAGGACACAGGTCAGTT........................1911.001.00-----------------------------------------------------1.00---------------------
........................................................................................................................................................................................................................CAGGTCAGTTGTATGCAGCCCTGCAC........2611.001.00------------------------------------------------1.00--------------------------
...................................................................................................................................................................................CATACCCTCCTCCCTTCCCAG..................................................2111.001.00---1.00-----------------------------------------------------------------------
.........................................................................................................................................CTGCAGAAGGCAGGAGGGGGTAG..........................................................................................2311.001.00------------------1.00--------------------------------------------------------
..................................................................................................................................................................................TCATACCCTCCTCCCTTCCCAAA.................................................2311.003.00------------------------------------------------------1.00--------------------
..............................................................................................................................................GAAGGCAGGAGGGGGTATTGG.......................................................................................211.000.00---1.00-----------------------------------------------------------------------
............................................................................................................................................CAGAAGGCAGGAGGGGGTAGGAT.......................................................................................2311.001.00-----------------------------1.00---------------------------------------------
.........................................................................................................................................................................................................CCAGCTCCAAGGACACAGGT.............................2011.001.00----------------------------------------------------------1.00----------------
...........................................................................................................................................GCAGAAGGCAGGAGGGGGTAGGATT......................................................................................251.000.00-----------------------------1.00---------------------------------------------
..................................................................................................................................................................................TCATACCCTCCTCCCTTCCCAGTT................................................2411.0013.00------------------------------------1.00--------------------------------------
........................................................................................................................................TCTGCAGAAGGCAGGAGGGGGTAGGAT.......................................................................................271.000.00---------------------------------------1.00-----------------------------------
..................................................................................................................................................................................TCATACCCTCCTCCCTTCCCAATA................................................2411.003.00-------------------------------------------------------------------1.00-------
..........................................................................................................................................TGCAGAAGGCAGGAGGGGGTAGGAT.......................................................................................2511.003.00-------------------------------------------1.00-------------------------------
.............................................................................................................................................AGAAGGCAGGAGGGGGTAGGATT......................................................................................231.000.00--1.00------------------------------------------------------------------------
...........................................TTCGGGGAGAGGCCGGTCCT...........................................................................................................................................................................................201.000.00---1.00-----------------------------------------------------------------------
.................................................................................................................................................................................CTCATACCCTCCTCCCCTA......................................................191.000.00----------1.00----------------------------------------------------------------
............................................................................................................................................CAGAAGGCAGGAGGGGGTAGGA........................................................................................2211.001.00----------------1.00----------------------------------------------------------
..................................................................................................................................................................................TCATACCCTCCTCCCTTCCCT...................................................211.000.00-------------------------------------------------1.00-------------------------
...................................................................................................................................................................................................CCCAGGCCAGCTCCACGCA....................................191.000.00----------------------------------1.00----------------------------------------
................................................................................................................................................................GACTGGGGTCCGGGGGTCCCT.....................................................................211.000.00-------------------------1.00-------------------------------------------------
................................................................................................................................................................................TCTCATACCCTCCTCCCTTCCCAG..................................................2411.001.00-----------------------------------------------1.00---------------------------
...........................................................................................................................................GCAGAAGGCAGGAGGGGGTAG..........................................................................................2111.001.00----------------------------------------------------1.00----------------------
........................................................................................................................................................GGGGGTAGGACTGGGGACAT..............................................................................201.000.00---1.00-----------------------------------------------------------------------
..................................................................................................................................................................................TCATACCCTCCTCCCTTCCCAGT.................................................2311.0013.00----------------------------------------1.00----------------------------------
.....................................................GGCCGGCAGGCCCAG......................................................................................................................................................................................1540.250.25--------------------------------------------------------------------------0.25

Antisense strand
GACCTCTGGGATATTCCCAGCCACCTGGGAGTGGTGGCATCCTTTCGGGGAGAGGCCGGCAGGCCCAGGGCCAATGGCCTCCCCACAAGGCCTTGTGGCAGTGTCACCTCTGAACCTTGGGACTTGGCACTTGTGTTCTGCAGAAGGCAGGAGGGGGTAGGACTGGGGTCCGGGGGTCTCATACCCTCCTCCCTTCCCAGGCCAGCTCCAAGGACACAGGTCAGTTGTATGCAGCCCTGCACCACCGCAT
.........................................................................................................................................(((..(((((.(((((((....((((....)))).((....))...))))))).))))).)))..................................................
.....................................................................................................................................134...............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189782SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577740(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577743(Rovira)
total RNA. (breast)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR029127(GSM416756)
A549. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577744(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR040036(GSM532921)
G243N. (cervix)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577739(Rovira)
total RNA. (breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR029130(GSM416759)
DLD2. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR191528(GSM715638)
130genomic small RNA (size selected RNA from . (breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR040030(GSM532915)
G013N. (cervix)		TAX577580(Rovira)
total RNA. (breast)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040029(GSM532914)
G026T. (cervix)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189783SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR189786SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
....................................................................................................................................................................................................................................ATGCAGCCCTGCACCCTCT... 1995.000.0014.0011.007.00-6.006.005.005.004.004.00-3.00-4.003.002.00-3.00---2.001.001.001.001.002.00----2.00---1.00------1.00--1.00-------------1.00--1.00-1.001.00------1.00--
....................................................................................................................................................................................................................................ATGCAGCCCTGCACCCTC.... 1814.000.002.001.003.00-2.003.001.00----1.00--------------------------1.00------------------------------------
....................................................................................................................................................................................................................................ATGCAGCCCTGCACCCTTT... 199.000.00-3.00--1.00--1.00-1.00------------1.001.00---------1.00-----------------------------------------
....................................................................................................................................................................................................................................ATGCAGCCCTGCACCCGTG... 192.000.00-1.00--1.00----------------------------------------------------------------------
....................................................................................................................................................................................................................................ATGCAGCCCTGCACCCGCT... 191.000.00---------------1.00-----------------------------------------------------------
..........................GGGAGTGGTGGCATCCTTG............................................................................................................................................................................................................. 191.000.00--------------------1.00------------------------------------------------------
.........................................................................................................................................................................................................................................GCCCTGCACCACCGCCGGT 191.000.00---------------1.00-----------------------------------------------------------
.......................................................................................................................................................................................................................................CAGCCCTGCACCACCTCGC 191.000.00------------------------1.00--------------------------------------------------
...................................................................................................................................................................................................................................TATGCAGCCCTGCACCTCTG... 201.000.00--------------1.00------------------------------------------------------------
....................................................................................................................................................................................................................................ATGCAGCCCTGCACCCTCG... 191.000.00--------1.00------------------------------------------------------------------
....................................................................................................................................................................................................................................ATGCAGCCCTGCACCCTAT... 191.000.001.00--------------------------------------------------------------------------
..............................................................................................................................................................AGGACTGGGGTCCGGCTC.......................................................................... 181.000.00-------------------------------------1.00-------------------------------------
....................................................................................................................................................................................................................................ATGCAGCCCTGCACCTTCT... 191.000.00-1.00-------------------------------------------------------------------------
....................................................................................................................................................................................................................................ATGCAGCCCTGCACCCACT... 191.000.00------1.00--------------------------------------------------------------------
.......................................................................................................................................................................................................................................CAGCCCTGCACCACCTTC. 181.000.00---1.00-----------------------------------------------------------------------
...................................................................................................................................................................................................................................TATGCAGCCCTGCACCTCT.... 191.000.00----------1.00----------------------------------------------------------------
...............................................................................................................................................CTACCCCCTCCTGCCTT.......................................................................................... 1730.330.33-------------------0.33-------------------------------------------------------
..............................................................................................................................................ACCCCCTCCTGCCTTC............................................................................................ 1640.250.25-------------------------------------------------------------------------0.25-